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Lag0039351 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039351
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiont-SNARE coiled-coil homology domain-containing protein
Genome locationchr2:41887938..41888516
RNA-Seq ExpressionLag0039351
SyntenyLag0039351
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006887 - exocytosis (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146633.1 syntaxin-124 [Cucumis sativus]5.2e-1094.59Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAG+ESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
XP_008442020.1 PREDICTED: syntaxin-124 [Cucumis melo]1.4e-1097.3Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAGNESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
XP_022140143.1 syntaxin-124-like [Momordica charantia]1.4e-1097.3Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAGNESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
XP_022994435.1 syntaxin-124 [Cucurbita maxima]3.4e-0989.19Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQA+LD+ME GNESVNLD+FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
XP_038895402.1 syntaxin-124 [Benincasa hispida]1.4e-1097.3Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAGNESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
TrEMBL top hitse value%identityAlignment
A0A0A0LXB1 t-SNARE coiled-coil homology domain-containing protein2.5e-1094.59Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAG+ESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
A0A1S3B4Q7 syntaxin-1246.6e-1197.3Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAGNESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
A0A5A7UTS3 Syntaxin-1246.6e-1197.3Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAGNESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
A0A6J1CHC4 syntaxin-124-like6.6e-1197.3Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQAYLD+MEAGNESVNLDRFF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
A0A6J1K166 syntaxin-1241.6e-0989.19Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFKKYTDLKQQA+LD+ME GNESVNLD+FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
SwissProt top hitse value%identityAlignment
O64791 Syntaxin-1243.5e-0972.97Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFS+SFKKYTDLKQQA +D++E+G E++NLD+FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
Q9SXB0 Syntaxin-1255.8e-0462.16Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFK     K QA L ++EAG E++NLD+FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
Q9ZQZ8 Syntaxin-1233.4e-0457.5Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGN---ESVNLDRFF
        MNDL S+SFK+YTDL  Q  LD++E+ N   +S NLD FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGN---ESVNLDRFF
Arabidopsis top hitse value%identityAlignment
AT1G11250.1 syntaxin of plants 1254.1e-0562.16Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFSNSFK     K QA L ++EAG E++NLD+FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
AT1G61290.1 syntaxin of plants 1242.5e-1072.97Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
        MNDLFS+SFKKYTDLKQQA +D++E+G E++NLD+FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFF
AT4G03330.1 syntaxin of plants 1232.4e-0557.5Show/hide
Query:  MNDLFSNSFKKYTDLKQQAYLDNMEAGN---ESVNLDRFF
        MNDL S+SFK+YTDL  Q  LD++E+ N   +S NLD FF
Subjt:  MNDLFSNSFKKYTDLKQQAYLDNMEAGN---ESVNLDRFF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGACTTATTCTCGAATTCGTTCAAAAAGTACACGGATCTGAAGCAACAGGCGTATCTGGACAACATGGAGGCTGGGAATGAGAGTGTGAATTTGGACAGATTCTT
CGTTTGCCTTCTACCCTGTCACTGTGAACTTCTTTCCCAAGCCACTGACGACGGAGGTGCGAGTCTGGTCGATGGAGGAGTCAGGGCTTCAGCCGGGGAGGCTCCAGAGA
GTGGCATTCGAACGATCCAGAGCCTCGAGCTTCCCTTTGATCATCTTGACTCGCTTCAGAACCTGTGCGACGTCGGTCTCCATTATGGCCCTCAGCTCTTTCATCGTCTT
GGCATTGTGCAAGATCGAGGAGTGCAAGATCGGAAAGAGAAAGAAAAAAAAACGCCGGCGGCGACGAGCGGTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGACTTATTCTCGAATTCGTTCAAAAAGTACACGGATCTGAAGCAACAGGCGTATCTGGACAACATGGAGGCTGGGAATGAGAGTGTGAATTTGGACAGATTCTT
CGTTTGCCTTCTACCCTGTCACTGTGAACTTCTTTCCCAAGCCACTGACGACGGAGGTGCGAGTCTGGTCGATGGAGGAGTCAGGGCTTCAGCCGGGGAGGCTCCAGAGA
GTGGCATTCGAACGATCCAGAGCCTCGAGCTTCCCTTTGATCATCTTGACTCGCTTCAGAACCTGTGCGACGTCGGTCTCCATTATGGCCCTCAGCTCTTTCATCGTCTT
GGCATTGTGCAAGATCGAGGAGTGCAAGATCGGAAAGAGAAAGAAAAAAAAACGCCGGCGGCGACGAGCGGTGGCTGA
Protein sequenceShow/hide protein sequence
MNDLFSNSFKKYTDLKQQAYLDNMEAGNESVNLDRFFVCLLPCHCELLSQATDDGGASLVDGGVRASAGEAPESGIRTIQSLELPFDHLDSLQNLCDVGLHYGPQLFHRL
GIVQDRGVQDRKEKEKKTPAATSGG