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Lag0039354 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039354
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr2:41959129..41960656
RNA-Seq ExpressionLag0039354
SyntenyLag0039354
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]1.1e-1842.11Show/hide
Query:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD
        V+W    + V+DS++G FS++   V +     W++G+YGPC    R +F+ EL +L G C   WC+  DFNVVR+  +K    R+ KSMR FN FI   +
Subjt:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD

Query:  LIDIPLANGRFTWS
        L D  L N  FTWS
Subjt:  LIDIPLANGRFTWS

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]1.4e-1842.11Show/hide
Query:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD
        V+W    + V+DS++G FS++   V +     W++G+YGPC    R +F+ EL +L G C   WC+  DFNVVR+  +K    R+ KSMR FN FI   +
Subjt:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD

Query:  LIDIPLANGRFTWS
        L D  L N  FTWS
Subjt:  LIDIPLANGRFTWS

XP_028093340.1 uncharacterized protein LOC114293463 [Camellia sinensis]2.9e-1942.24Show/hide
Query:  MLVMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISL
        +L+MW +  +   + V G FS++       +   W+TGVYGP    +R+ ++ EL  L G+C  NWCV  DFNVVR   +KL      +SMR F+ FI  
Subjt:  MLVMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISL

Query:  FDLIDIPLANGRFTWS
         +LID+PL+N RFTWS
Subjt:  FDLIDIPLANGRFTWS

XP_030478286.1 uncharacterized protein LOC115695356 [Cannabis sativa]3.4e-2042.5Show/hide
Query:  LVMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLF
        L++W    + V+DS++G FSI+      G    W +GVYGPCS + R  F+ E+  L+ IC   WC+ RDFNVVR V++KL +    KSM+ F++ +   
Subjt:  LVMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLF

Query:  DLIDIPLANGRFTWSRAGNK
         L+D  L NG+FTWS   NK
Subjt:  DLIDIPLANGRFTWSRAGNK

XP_031739979.1 uncharacterized protein LOC116403332 [Cucumis sativus]1.5e-2346.96Show/hide
Query:  MLVMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISL
        +L++WKE  + VVDS+ G FSI+     +    GWITGVYGP S   R  F+ EL +L G+C  NWCV  DFNVVRW+ +K       +SM +F   I  
Subjt:  MLVMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISL

Query:  FDLIDIPLANGRFTW
         D++DIP  NGRF+W
Subjt:  FDLIDIPLANGRFTW

TrEMBL top hitse value%identityAlignment
A0A4Y1RS61 TatD related DNase5.3e-1942.11Show/hide
Query:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD
        V+W    + V+DS++G FS++   V +     W++G+YGPC    R +F+ EL +L G C   WC+  DFNVVR+  +K    R+ KSMR FN FI   +
Subjt:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD

Query:  LIDIPLANGRFTWS
        L D  L N  FTWS
Subjt:  LIDIPLANGRFTWS

A0A5E4F090 Reverse transcriptase domain-containing protein (Fragment)6.9e-1942.11Show/hide
Query:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD
        V+W    + V+DS++G FS++   V +     W++G+YGPC    R +F+ EL +L G C   WC+  DFNVVR+  +K    R+ KSMR FN FI   +
Subjt:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD

Query:  LIDIPLANGRFTWS
        L D  L N  FTWS
Subjt:  LIDIPLANGRFTWS

M5VS59 Reverse transcriptase domain-containing protein (Fragment)1.8e-1942.11Show/hide
Query:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD
        V+W    + V+DS++G FS++   V +     W++G+YGPC    R +F+ EL +L G C   WC+  DFNVVR+  +K    R+ KSMR FN FI   +
Subjt:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD

Query:  LIDIPLANGRFTWS
        L D  L N  FTWS
Subjt:  LIDIPLANGRFTWS

M5WPQ5 Reverse transcriptase domain-containing protein3.1e-1942.11Show/hide
Query:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD
        V+W    + V+DS++G FS++   V +     W++G+YGPC    R +F+ EL +L G C   WC+  DFNVVR+  +K    R+ KSMR FN FI   +
Subjt:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD

Query:  LIDIPLANGRFTWS
        L D  L N  FTWS
Subjt:  LIDIPLANGRFTWS

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)2.4e-1942.11Show/hide
Query:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD
        V+W    + V+DS++G FS++   V +     W++G+YGPC    R +F+ EL +L G C   WC+  DFNVVR+  +K    R+ KSMR FN FI   +
Subjt:  VMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFD

Query:  LIDIPLANGRFTWS
        L D  L N  FTWS
Subjt:  LIDIPLANGRFTWS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTATGTGGAAAGAGAGTTGTTTAGAAGTTGTTGATTCTGTGTTGGGAGCCTTCTCCATTGCCCCTGAATGTGTGCTCCATGGCCATATCAAAGGCTGGATCAC
GGGAGTCTATGGCCCTTGCTCAACCTCCAACAGAAAGGCCTTTTTCCATGAACTACATAATCTAGCAGGGATTTGTCAAGGTAATTGGTGTGTGGCTAGAGACTTCAATG
TAGTTCGATGGGTTGAGGATAAATTGTATGCTACGAGGATCATCAAGAGCATGAGAAAATTCAATAAGTTTATTTCTCTTTTTGATCTAATCGATATTCCCTTGGCTAAT
GGCAGGTTTACTTGGTCCAGAGCTGGTAATAAGGGGATGCCTCTAAACTGGATAGATTCATCGTCTCCAGAGATTGGACAGAAGCTTTTAAGGAGCTTAGGCTTGGTAGG
TTACAACGTATTGCCTCTCATAGTCTCTAGAGATTGGACAGATGCTTTTAAGGAGCTTAGGCTTGAGGATTTCCATGGAAGCTTGGTTGATCGATGGATCAGAATCACCT
CAAGTCTATCAAGGGAGAGCCTCGAACTGGTTGCGATGACTTGCTGGGCAATATGGTTGGACAGAAATAAGAAAAGCACTAGTGAAGAAACTCCATCAGTCGAATTAACT
CGAGAGGATCTGCTTCTTCATCGTTCAACCAGAGGAATCCTCCACGAATGGGAAATTGGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTATGTGGAAAGAGAGTTGTTTAGAAGTTGTTGATTCTGTGTTGGGAGCCTTCTCCATTGCCCCTGAATGTGTGCTCCATGGCCATATCAAAGGCTGGATCAC
GGGAGTCTATGGCCCTTGCTCAACCTCCAACAGAAAGGCCTTTTTCCATGAACTACATAATCTAGCAGGGATTTGTCAAGGTAATTGGTGTGTGGCTAGAGACTTCAATG
TAGTTCGATGGGTTGAGGATAAATTGTATGCTACGAGGATCATCAAGAGCATGAGAAAATTCAATAAGTTTATTTCTCTTTTTGATCTAATCGATATTCCCTTGGCTAAT
GGCAGGTTTACTTGGTCCAGAGCTGGTAATAAGGGGATGCCTCTAAACTGGATAGATTCATCGTCTCCAGAGATTGGACAGAAGCTTTTAAGGAGCTTAGGCTTGGTAGG
TTACAACGTATTGCCTCTCATAGTCTCTAGAGATTGGACAGATGCTTTTAAGGAGCTTAGGCTTGAGGATTTCCATGGAAGCTTGGTTGATCGATGGATCAGAATCACCT
CAAGTCTATCAAGGGAGAGCCTCGAACTGGTTGCGATGACTTGCTGGGCAATATGGTTGGACAGAAATAAGAAAAGCACTAGTGAAGAAACTCCATCAGTCGAATTAACT
CGAGAGGATCTGCTTCTTCATCGTTCAACCAGAGGAATCCTCCACGAATGGGAAATTGGAAGCTGA
Protein sequenceShow/hide protein sequence
MLVMWKESCLEVVDSVLGAFSIAPECVLHGHIKGWITGVYGPCSTSNRKAFFHELHNLAGICQGNWCVARDFNVVRWVEDKLYATRIIKSMRKFNKFISLFDLIDIPLAN
GRFTWSRAGNKGMPLNWIDSSSPEIGQKLLRSLGLVGYNVLPLIVSRDWTDAFKELRLEDFHGSLVDRWIRITSSLSRESLELVAMTCWAIWLDRNKKSTSEETPSVELT
REDLLLHRSTRGILHEWEIGS