; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039357 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039357
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-binding protein 24 isoform X1
Genome locationchr2:42032243..42034508
RNA-Seq ExpressionLag0039357
SyntenyLag0039357
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592286.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-15090.88Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STPKHEKKKWELT          GGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMY TG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

KAG7037185.1 putative RNA-binding protein ARP1 [Cucurbita argyrosperma subsp. argyrosperma]9.6e-15091.3Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        M+PANL  QFGDTTYTKVFVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYGFVTFR+PEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELT-GGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGT
        STP HEKKKWEL  GGGGGGGGGGGGGGRNFRVLS FQ+GFGGNVGSAFHSTPTFPHYAV QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMY T
Subjt:  STPKHEKKKWELT-GGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGT

Query:  GPGGIMSGAAAAAAAFYPYFQFGEGS--GGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        GPGG+MSG    AAAFYPYFQFGEGS  GGGANGF+AGSGQQGYGVQYPHHLFQYSA INSTATTFPQHY GPPMSLPPTPPTLPSGVTMAL  PIPHR
Subjt:  GPGGIMSGAAAAAAAFYPYFQFGEGS--GGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_022157230.1 RNA-binding protein 24 isoform X1 [Momordica charantia]1.7e-15193.29Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPANLA QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STPKHEKKKWELT         GGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGGIM+GAAAAAAAFYPYFQFGEGS GGG NGFTAGSGQQ GYGVQYPHHLFQYSAAINS+AT+FPQHYA PPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_022930178.1 RNA-binding protein 38 isoform X1 [Cucurbita moschata]1.0e-15191.55Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STPKHEKKKWELT         GGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYGTG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

XP_023535742.1 RNA-binding protein 38-like isoform X1 [Cucurbita pepo subsp. pepo]8.6e-15190.88Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STPKHEKKKWELT           GGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYGTG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

TrEMBL top hitse value%identityAlignment
A0A6J1DSJ0 RNA-binding protein 24 isoform X18.4e-15293.29Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTPANLA QFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STPKHEKKKWELT         GGGGGRNFRVLSSFQ+GFGGNVGSAFHS  TFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGGIM+GAAAAAAAFYPYFQFGEGS GGG NGFTAGSGQQ GYGVQYPHHLFQYSAAINS+AT+FPQHYA PPMSLPPTPPTLPSGVTMALPAPIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQ-GYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1EUB1 RNA-binding protein 38 isoform X14.9e-15291.55Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STPKHEKKKWELT         GGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYGTG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1F1U2 probable RNA-binding protein ARP1 isoform X15.3e-14690.24Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        M+PANL GQFGDTTYTKVFVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYGFVTFR+PEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STP HEKKKWEL   GGGGGGGGGGGGRNFRVLS FQ+GFGGNVGSAFHSTPTFP YAV QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMY TG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGG+MSG    AAAFYPYFQFGEGS GGGANGF+AGSGQQGYG QYPHHLFQYSA INSTATT PQHY GPPMSLP TPPTLPSGVTMAL  PIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGS-GGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1ID05 probable RNA-binding protein ARP1 isoform X16.9e-14689.26Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        M+PANL  QFGDTTYTKVFVGGLAWETHKDTM KYF+QFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STP HEKKKWEL        GGGGGGGRNFRVLS FQ+GFGGNVGSAFHSTPTFPHYAV QGIPYNLYGYSSYSPD+TYPTSYYNVYGGATAQYP+Y TG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGS--GGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGG+MSG    AAAFYPYFQFGEGS  GGGANGF+ GSGQQGYGVQYPHHLFQYSA INSTATTFPQHY GPPMSLPPTPPTLPSGVTMAL APIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGS--GGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

A0A6J1IGG9 RNA-binding protein 38 isoform X14.9e-15291.55Show/hide
Query:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MTP+N+A QFGDTTYTKVFVGGLAWET KDTMK YFEQFGDILEAVVITDKATGRSKGYGFVTFREP+AAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG
        STPKHEKKKWELT         GGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYA+ QGIPYNLYGYSSYSPDY YPTSYYNVYGGATAQYPMYGTG
Subjt:  STPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTG

Query:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR
        PGGI+SGAAAAAAAFYPYFQFGEGSGGGANGFT GSGQQGYGVQYPHHL QYSAA+NST TTFPQHYA PPMSLPPTPPTLPSGVTMALP PIPHR
Subjt:  PGGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR

SwissProt top hitse value%identityAlignment
Q5ZMA3 RNA-binding protein 241.3e-2463.53Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q62176 RNA-binding protein 387.6e-2558.51Show/hide
Query:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        P+ + G   DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q6GQD3 RNA-binding protein 24-A1.3e-2463.53Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q9H0Z9 RNA-binding protein 387.6e-2558.51Show/hide
Query:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        P  + G   DTT+TK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  PANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q9M1S3 Probable RNA-binding protein ARP11.3e-2436.33Show/hide
Query:  TPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS
        T  N+ G FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF++ +AA RAC D+ P+I+GRRANCNLASLG +  K  
Subjt:  TPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPS

Query:  TPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGP
        T    ++           G   G       V +  Q  +     +  H           Q +P+  YGY S    Y  P   +N   G      M G   
Subjt:  TPKHEKKKWELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGP

Query:  GGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPP
               +     +Y +  +    GGG     A S    +   YP+H         S A  FPQ     P+S   TPP
Subjt:  GGIMSGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPP

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-5953.17Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGIM
                   GGGG   N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG +
Subjt:  ELTGGGGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGIM

Query:  SGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL-------PPTPPTLP
        + AAA+A  FYP        GGG  G      Q  Y     HHL  Y+          P HY+ P  S+       P  PP +P
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL-------PPTPPTLP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.8e-6054.65Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGIM
                   GGGG   N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG +
Subjt:  ELTGGGGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGIM

Query:  SGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL
        + AAA+A  FYP        GGG  G      Q  Y     HHL  Y+          P HY+ P  S+
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSL

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-5852.08Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
        GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTP H     
Subjt:  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW

Query:  ELTGGGGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGIM
                   GGGG   N RV +S+ QTGFG          PTF HY     +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +YG     GG +
Subjt:  ELTGGGGGGGGGGGGGGRNFRV-LSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQYPMYG--TGPGGIM

Query:  SGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPI
        + AAA+A  FYP        GGG  G      Q  Y     HHL  Y+          P HY+ P  S+        S  T +   P+
Subjt:  SGAAAAAAAFYPYFQFGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPI

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-6756.54Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGTGPGGIMSGAA
                   G  GGR  +V S F+T F G   +A  S   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+PMYG+GP   M+G A
Subjt:  LTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQYPMYGTGPGGIMSGAA

Query:  AA-AAAFYPYFQFGEGSGGGANGFTAGSGQQGYG-VQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP
        AA AA FYPY QF EG+G             GY  + YP+H+F YSA        +P H+ G P+SL P+ P +PS V  A+P
Subjt:  AA-AAAFYPYFQFGEGSGGGANGFTAGSGQQGYG-VQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.8e-6956.74Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE
        DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +PEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWE

Query:  LTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIMSGAAA
                   G  GGR  +V S F+T F G   +A  S   F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+PMYG+GP   M+G AA
Subjt:  LTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIMSGAAA

Query:  A-AAAFYPYFQFGEGSGGGANGFTAGSGQQGYG-VQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP
        A AA FYPY QF EG+G             GY  + YP+H+F YSA        +P H+ G P+SL P+ P +PS V  A+P
Subjt:  A-AAAFYPYFQFGEGSGGGANGFTAGSGQQGYG-VQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCAGCTAACTTGGCAGGCCAGTTCGGCGACACCACTTACACCAAGGTCTTCGTCGGCGGCTTGGCTTGGGAGACCCACAAAGACACCATGAAGAAATACTTCGA
ACAGTTCGGCGACATCTTGGAAGCCGTAGTTATTACCGACAAGGCCACCGGTCGATCCAAGGGCTATGGATTTGTCACTTTCCGGGAACCGGAGGCCGCCATGAGGGCTT
GCGTCGATGCTGCTCCGGTCATCGACGGCCGGAGAGCCAACTGCAATCTCGCTTCTCTCGGCGTTCAGAGATCTAAACCCTCCACGCCCAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGGAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGC
TTTTCATTCAACACCAACTTTCCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCTACGAGCTACT
ACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGTACCGGACCCGGCGGCATAATGAGCGGTGCGGCGGCTGCTGCGGCGGCGTTCTACCCGTATTTCCAA
TTCGGAGAAGGAAGCGGCGGAGGAGCTAACGGCTTCACTGCCGGCTCCGGGCAGCAGGGGTATGGGGTTCAGTACCCGCACCATCTATTTCAGTACTCCGCCGCCATTAA
TTCAACTGCAACGACGTTCCCTCAGCACTATGCTGGTCCTCCCATGTCTCTGCCTCCCACGCCTCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCAGCACCAATCC
CACATCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCAGCTAACTTGGCAGGCCAGTTCGGCGACACCACTTACACCAAGGTCTTCGTCGGCGGCTTGGCTTGGGAGACCCACAAAGACACCATGAAGAAATACTTCGA
ACAGTTCGGCGACATCTTGGAAGCCGTAGTTATTACCGACAAGGCCACCGGTCGATCCAAGGGCTATGGATTTGTCACTTTCCGGGAACCGGAGGCCGCCATGAGGGCTT
GCGTCGATGCTGCTCCGGTCATCGACGGCCGGAGAGCCAACTGCAATCTCGCTTCTCTCGGCGTTCAGAGATCTAAACCCTCCACGCCCAAACACGAGAAAAAGAAATGG
GAATTGACAGGAGGAGGAGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGGAACTTTAGGGTATTGAGCTCTTTCCAGACTGGATTTGGAGGGAATGTTGGATCAGC
TTTTCATTCAACACCAACTTTCCCTCATTATGCTGTCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCGCCCGACTACACTTACCCTACGAGCTACT
ACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGTACCGGACCCGGCGGCATAATGAGCGGTGCGGCGGCTGCTGCGGCGGCGTTCTACCCGTATTTCCAA
TTCGGAGAAGGAAGCGGCGGAGGAGCTAACGGCTTCACTGCCGGCTCCGGGCAGCAGGGGTATGGGGTTCAGTACCCGCACCATCTATTTCAGTACTCCGCCGCCATTAA
TTCAACTGCAACGACGTTCCCTCAGCACTATGCTGGTCCTCCCATGTCTCTGCCTCCCACGCCTCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCAGCACCAATCC
CACATCGCTAA
Protein sequenceShow/hide protein sequence
MTPANLAGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKW
ELTGGGGGGGGGGGGGGRNFRVLSSFQTGFGGNVGSAFHSTPTFPHYAVQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGIMSGAAAAAAAFYPYFQ
FGEGSGGGANGFTAGSGQQGYGVQYPHHLFQYSAAINSTATTFPQHYAGPPMSLPPTPPTLPSGVTMALPAPIPHR