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Lag0039362 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039362
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhloem filament protein
Genome locationchr2:42161944..42162357
RNA-Seq ExpressionLag0039362
SyntenyLag0039362
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588755.1 hypothetical protein SDJN03_17320, partial [Cucurbita argyrosperma subsp. sororia]2.2e-0841.57Show/hide
Query:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK
        KWI+I  V E  V+ +A+FAV +YN I+ +  KY+S    W+M L  +   FRL + V+DCLGR    + +V E +   E V  LES K
Subjt:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK

KAG6588758.1 hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0839.33Show/hide
Query:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK
        KWI+I  V E  V+ +A+FAV +YN ++ +  KYKS    W+M L  +   +RL ++V+DCLGR      +V E +   E +  LES K
Subjt:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK

KAG6588840.1 hypothetical protein SDJN03_17405, partial [Cucurbita argyrosperma subsp. sororia]7.6e-0938.46Show/hide
Query:  GHGRHPPSPELPSYGKWIEIS-VHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL
        GH   P  P  P   KWI+IS +    V+EV++FA+ ++N  + D LKY      WYM + + + +FR+ L+ +DCLGR  HYEA V+  +   + +  +
Subjt:  GHGRHPPSPELPSYGKWIEIS-VHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL

Query:  ESFK
        ESFK
Subjt:  ESFK

XP_023522970.1 uncharacterized protein LOC111787034 [Cucurbita pepo subsp. pepo]9.9e-0941.57Show/hide
Query:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK
        KWI+I  V E  V+ +A+FAV +YN I+ +  KYKS    W+M L  +   F L ++V+DCLGR    + +V E +   E V  LES K
Subjt:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK

XP_038887075.1 uncharacterized protein LOC120077251 [Benincasa hispida]9.9e-0946.07Show/hide
Query:  WIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALD-EKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK
        WIEI +V E  V+EVA+FAVAEYN+  DD L Y  T+  WY  ++ E    F L ++ +DC GR   Y+A+V E+R  +E +  L SFK
Subjt:  WIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALD-EKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK

TrEMBL top hitse value%identityAlignment
A0A6J1EI90 uncharacterized protein LOC1114345924.5e-0736.54Show/hide
Query:  GHGRHPPSPELPSYGKWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL
        GH   P  P  P   KWI+I ++    V+EV++FA+ ++N  + D LKY      WYM + + + +FR+ L+ +DCL R  HYEA V       + +  +
Subjt:  GHGRHPPSPELPSYGKWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL

Query:  ESFK
        ESFK
Subjt:  ESFK

A0A6J1EIQ8 uncharacterized protein LOC1114345174.5e-0738.64Show/hide
Query:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESF
        KWI+I  V+   +++VA+FAV ++N  + DCL Y S    WY+ L   + ++RL ++  D LGR L YE +V E +   E +  L SF
Subjt:  KWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESF

A0A6J1ELQ9 uncharacterized protein LOC1114345153.1e-0837.5Show/hide
Query:  GHGRHPPSPELPSYGKWIEIS-VHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL
        GH   P  P  P   KWI+IS +    V+EV++FA+ ++N  + D LKY      WYM + + + +FR+ L+ +DCL R  HYEA V+  +   + +  +
Subjt:  GHGRHPPSPELPSYGKWIEIS-VHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL

Query:  ESFK
        ESFK
Subjt:  ESFK

A0A6J1EQ39 uncharacterized protein LOC111434636 isoform X24.5e-0736.54Show/hide
Query:  GHGRHPPSPELPSYGKWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL
        GH   P  P  P   KWI+I ++    V+EV++FA+ ++N  + D LKY      WYM + + + +FR+ L+ +DCL R  HYEA V       + +  +
Subjt:  GHGRHPPSPELPSYGKWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTL

Query:  ESFK
        ESFK
Subjt:  ESFK

Q7DMD5 Phloem filament protein (Fragment)2.0e-0743.3Show/hide
Query:  SPELPSYGKWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK
        SPE P   KWI+I +V    V+E+A+FAV E+N+ N D LKY      W+M L   + +FRL L+ +D LGR  +YEA+V       + +  LESFK
Subjt:  SPELPSYGKWIEI-SVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGRRLHYEAIVHENRVHHENVWTLESFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAGCATTGGAGGGGGATTTGGCATCAACTTGGGTGGTTGGGTTGATCCCTTCCTTGGCCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCGACA
TCCTCCGAGTCCCGAACTTCCTTCTTATGGCAAATGGATAGAAATCTCTGTCCACGAACAAGAGGTGAAAGAAGTTGCAAGGTTTGCGGTGGCAGAGTACAATCGCATAA
ACGATGACTGTTTGAAATACAAGTCCACATCTGCAGCTTGGTATATGGCTTTGGATGAGAAGAGCAAACAGTTCCGCCTCATTCTTCAAGTGGAAGACTGTTTGGGACGT
AGGCTCCACTATGAGGCTATTGTTCATGAAAACAGAGTTCATCATGAAAATGTCTGGACGCTTGAATCATTCAAGCGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCAGCATTGGAGGGGGATTTGGCATCAACTTGGGTGGTTGGGTTGATCCCTTCCTTGGCCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCGACA
TCCTCCGAGTCCCGAACTTCCTTCTTATGGCAAATGGATAGAAATCTCTGTCCACGAACAAGAGGTGAAAGAAGTTGCAAGGTTTGCGGTGGCAGAGTACAATCGCATAA
ACGATGACTGTTTGAAATACAAGTCCACATCTGCAGCTTGGTATATGGCTTTGGATGAGAAGAGCAAACAGTTCCGCCTCATTCTTCAAGTGGAAGACTGTTTGGGACGT
AGGCTCCACTATGAGGCTATTGTTCATGAAAACAGAGTTCATCATGAAAATGTCTGGACGCTTGAATCATTCAAGCGTGCATGA
Protein sequenceShow/hide protein sequence
MRSIGGGFGINLGGWVDPFLGHGHGHGHGHGHGHGRHPPSPELPSYGKWIEISVHEQEVKEVARFAVAEYNRINDDCLKYKSTSAAWYMALDEKSKQFRLILQVEDCLGR
RLHYEAIVHENRVHHENVWTLESFKRA