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Lag0039366 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039366
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:42250165..42252256
RNA-Seq ExpressionLag0039366
SyntenyLag0039366
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1844395.1 unnamed protein product [Ananas comosus var. bracteatus]1.7e-0438.2Show/hide
Query:  NVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL
        +V I F   +K   T+    + AF + SGL+IN+     I INLP ++ +SLA+ FGC V  +P  Y+GL L  K    S  I L+ +L
Subjt:  NVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL

CAN82685.1 hypothetical protein VITISV_000485 [Vitis vinifera]1.7e-0439.08Show/hide
Query:  TILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL
        TI FS      L +    +  F + S L IN +     GIN   E+++SLAS F C V  WP +Y+GL L G P TI F  L++ R+
Subjt:  TILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL

RVW40781.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.8e-0531.93Show/hide
Query:  KRQIIDA---------SNSFWGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGFVTSGEDGSWVVFHWPITPLSSMVNLGLVNVTILFSSPVKG---
        +RQI+DA         S     G G+V KLDIEKA++  + W    F   +L   GF       SW++F+     ++ +VN         + S  +G   
Subjt:  KRQIIDA---------SNSFWGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGFVTSGEDGSWVVFHWPITPLSSMVNLGLVNVTILFSSPVKG---

Query:  ------LLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLL
              L+   FS++ +  E  GL IN K  E I +   +E V   A+ FGC+V ++PTTY+GL L
Subjt:  ------LLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLL

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]2.4e-0627.72Show/hide
Query:  AMGSF--KRQIIDA---SNSF------WGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGF-------VTSGEDGSWVVFHWPITPLSSMV------
        + G+F  KRQI+DA   +N            G+V K+D EKA++    W   NF +D+L  KGF       +  G+  S  +F      LS ++      
Subjt:  AMGSF--KRQIIDA---SNSF------WGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGF-------VTSGEDGSWVVFHWPITPLSSMV------

Query:  ----------------NLGLVNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTI
                        +L   + TI F    +    +    +  F + SG+ IN      +GIN  +E + ++A  +GCEV  WP  Y+GL L G P  +
Subjt:  ----------------NLGLVNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTI

Query:  SF
        +F
Subjt:  SF

XP_004146266.1 uncharacterized protein LOC101206158 [Cucumis sativus]7.0e-0638.1Show/hide
Query:  PITPLSSMVNLGL-VNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILL
        PI+P   MV+LG  ++  +  +SP+  L   F    + F+ ASG  IN    E +GINL   IV SLA  FGC++  WP+TY+ LLL G   + +F   +
Subjt:  PITPLSSMVNLGL-VNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILL

Query:  LRRLR
        +  +R
Subjt:  LRRLR

TrEMBL top hitse value%identityAlignment
A0A5E4FWN6 Reverse transcriptase domain-containing protein (Fragment)1.2e-0627.72Show/hide
Query:  AMGSF--KRQIIDA---SNSF------WGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGF-------VTSGEDGSWVVFHWPITPLSSMV------
        + G+F  KRQI+DA   +N            G+V K+D EKA++    W   NF +D+L  KGF       +  G+  S  +F      LS ++      
Subjt:  AMGSF--KRQIIDA---SNSF------WGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGF-------VTSGEDGSWVVFHWPITPLSSMV------

Query:  ----------------NLGLVNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTI
                        +L   + TI F    +    +    +  F + SG+ IN      +GIN  +E + ++A  +GCEV  WP  Y+GL L G P  +
Subjt:  ----------------NLGLVNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTI

Query:  SF
        +F
Subjt:  SF

A0A6V7QNP6 Reverse transcriptase domain-containing protein8.4e-0538.2Show/hide
Query:  NVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL
        +V I F   +K   T+    + AF + SGL+IN+     I INLP ++ +SLA+ FGC V  +P  Y+GL L  K    S  I L+ +L
Subjt:  NVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL

A5AY60 Reverse transcriptase domain-containing protein8.4e-0539.08Show/hide
Query:  TILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL
        TI FS      L +    +  F + S L IN +     GIN   E+++SLAS F C V  WP +Y+GL L G P TI F  L++ R+
Subjt:  TILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL

A5BQI4 Reverse transcriptase domain-containing protein8.4e-0539.08Show/hide
Query:  TILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL
        TI FS      L +    +  F + SGL IN +     GIN   E+++SLAS F C V  WP +Y+GL L G P TI F   ++ R+
Subjt:  TILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRL

M5WZA0 Reverse transcriptase domain-containing protein (Fragment)8.4e-0524.55Show/hide
Query:  AMGSF--KRQIIDASNSFWGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGF----------------------------------VTSGEDGSWVV
        + G+F  KRQI+DA        G+V K+D EKA++    W   NF +D+L  KGF                                  +  G+  S  +
Subjt:  AMGSF--KRQIIDASNSFWGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGF----------------------------------VTSGEDGSWVV

Query:  FHWPITPLSSMV----------------------NLGLVNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVV
        F      LS ++                      +L   + TI      +    +    +  F + SG+ IN      +GIN  +E + ++A  +GCEV 
Subjt:  FHWPITPLSSMV----------------------NLGLVNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEFIGINLPLEIVASLASDFGCEVV

Query:  SWPTTYVGLLLHGKPFTISF
         WP  Y+GL L G P  ++F
Subjt:  SWPTTYVGLLLHGKPFTISF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTAGAATAAATGGCATTCATAGAAATCCCTGGGAGAGCATATCAAAACAGTGGAGGTTGGTGCAGTATCTTCCCTCTTCTAAATTGGCAATGGTAAAAGAGTT
CTTGTTTTGGGAAGATGTATGGCTTGGTCATGGCTTTTCTTTCGAAACTATGGATGAAAGAATTTTGAGAATCCTCGAGGATAAAGCTTCTTCCGCCATGGGTTCTCTGT
CAGATGGCGGAGGAAGACCTCGATCATATTCTCTATCAGATGACAGAGGAAGACCTCGATCAGATGTTGGGGGTGGCCTAGCCATGGGTTCATTCAAAAGACAGATTATT
GATGCATCCAACTCATTTTGGGGGGGGGGGGGGGTTGTCATCAAACTGGATATTGAAAAAGCCTTCAACATGCCTTCAACATGGTTGATTGGGAATTTCTCTGAGGACAT
TTTAGTTGCAAAAGGGTTTGTCACAAGTGGAGAAGATGGATCTTGGGTTGTATTTCATTGGCCAATTACTCCATTATCATCCATGGTAAACCTAGGGTTGGTCAATGTTA
CGATTCTCTTTTCTTCGCCCGTCAAAGGCTTGCTAACATCTTTCTTCTCCACCATTCACGCCTTCAAAGAAGCCTCGGGTCTCCACATTAATCATAAGATGTTTGAGTTT
ATAGGCATCAATTTACCATTGGAAATCGTTGCCTCCCTTGCCTCTGATTTTGGCTGTGAGGTCGTATCATGGCCAACGACTTATGTGGGTCTCCTTCTTCATGGAAAGCC
CTTTACCATTTCTTTTGGGATCTTATTATTGAGAAGGTTGAGAGACGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGTAGAATAAATGGCATTCATAGAAATCCCTGGGAGAGCATATCAAAACAGTGGAGGTTGGTGCAGTATCTTCCCTCTTCTAAATTGGCAATGGTAAAAGAGTT
CTTGTTTTGGGAAGATGTATGGCTTGGTCATGGCTTTTCTTTCGAAACTATGGATGAAAGAATTTTGAGAATCCTCGAGGATAAAGCTTCTTCCGCCATGGGTTCTCTGT
CAGATGGCGGAGGAAGACCTCGATCATATTCTCTATCAGATGACAGAGGAAGACCTCGATCAGATGTTGGGGGTGGCCTAGCCATGGGTTCATTCAAAAGACAGATTATT
GATGCATCCAACTCATTTTGGGGGGGGGGGGGGGTTGTCATCAAACTGGATATTGAAAAAGCCTTCAACATGCCTTCAACATGGTTGATTGGGAATTTCTCTGAGGACAT
TTTAGTTGCAAAAGGGTTTGTCACAAGTGGAGAAGATGGATCTTGGGTTGTATTTCATTGGCCAATTACTCCATTATCATCCATGGTAAACCTAGGGTTGGTCAATGTTA
CGATTCTCTTTTCTTCGCCCGTCAAAGGCTTGCTAACATCTTTCTTCTCCACCATTCACGCCTTCAAAGAAGCCTCGGGTCTCCACATTAATCATAAGATGTTTGAGTTT
ATAGGCATCAATTTACCATTGGAAATCGTTGCCTCCCTTGCCTCTGATTTTGGCTGTGAGGTCGTATCATGGCCAACGACTTATGTGGGTCTCCTTCTTCATGGAAAGCC
CTTTACCATTTCTTTTGGGATCTTATTATTGAGAAGGTTGAGAGACGGCTAA
Protein sequenceShow/hide protein sequence
MRGRINGIHRNPWESISKQWRLVQYLPSSKLAMVKEFLFWEDVWLGHGFSFETMDERILRILEDKASSAMGSLSDGGGRPRSYSLSDDRGRPRSDVGGGLAMGSFKRQII
DASNSFWGGGGVVIKLDIEKAFNMPSTWLIGNFSEDILVAKGFVTSGEDGSWVVFHWPITPLSSMVNLGLVNVTILFSSPVKGLLTSFFSTIHAFKEASGLHINHKMFEF
IGINLPLEIVASLASDFGCEVVSWPTTYVGLLLHGKPFTISFGILLLRRLRDG