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Lag0039368 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039368
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-H2 finger protein ATL7
Genome locationchr2:42266836..42267295
RNA-Seq ExpressionLag0039368
SyntenyLag0039368
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039350.1 RING-H2 finger protein ATL7 [Cucumis melo var. makuwa]1.7e-4388.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  NNN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

XP_004141521.1 RING-H2 finger protein ATL58 [Cucumis sativus]2.3e-4588.99Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSK Y+V ASGPG  S+PAPELK+YQFFVFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA NNNN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

XP_008459509.1 PREDICTED: RING-H2 finger protein ATL7 [Cucumis melo]1.7e-4388.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  NNN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

XP_022973422.1 RING-H2 finger protein ATL7-like [Cucurbita maxima]5.4e-4282.41Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRRADW+SIRMR S AVNNN++S++EVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+FFVTDT
Subjt:  ETFFVTDT

XP_038889575.1 RING-H2 finger protein ATL7-like [Benincasa hispida]2.5e-4793.58Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSK YSV ASGPG VSRPAPELKLYQFFVFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAAVNNNN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ9 RING-type domain-containing protein1.1e-4588.99Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSK Y+V ASGPG  S+PAPELK+YQFFVFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA NNNN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

A0A1S3C9U6 RING-H2 finger protein ATL78.2e-4488.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  NNN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

A0A5A7T7X7 RING-H2 finger protein ATL78.2e-4488.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        M YDHLD SK YSV ASGPG VS+PAPELKLYQF VFCIP+LFTFILLFLFYLLYLRRRRADWTSIRMR SAA  NNN+S+SEVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDTL
        ETFFVTDTL
Subjt:  ETFFVTDTL

A0A6J1EX46 RING-H2 finger protein ATL7-like7.6e-4281.48Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRRADW+SIRMR S  VNNN++S++EVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+FFVTDT
Subjt:  ETFFVTDT

A0A6J1I7H2 RING-H2 finger protein ATL7-like2.6e-4282.41Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        MAYDHLDPSKGYSV ASGPGP S+PA E+K+YQFFVFCIP++ TFI+L LFYLLYLRRRRADW+SIRMR S AVNNN++S++EVGLKKEFREMLPIIVYN
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+FFVTDT
Subjt:  ETFFVTDT

SwissProt top hitse value%identityAlignment
Q570X5 RING-H2 finger protein ATL581.1e-1849.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        M+Y + +P + YS A S        +PELKLYQ F+F +P+ FTFI+LFLFYL+YLRR  +D +S+ MR +  +  N++S+ E+GL KE REMLPI+V+ 
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+F V D+
Subjt:  ETFFVTDT

Q84TF5 Probable E3 ubiquitin-protein ligase RHA4A6.5e-0635.96Show/hide
Query:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL
        A +LKLYQ F+F IP+LF+ IL  LFYL YL+RR +  +S     + + +S   +++  S   + +K E ++ L ++++NE     D+L
Subjt:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL

Q9SN27 E3 ubiquitin-protein ligase ATL599.1e-0839.74Show/hide
Query:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        F+ C+P+    ++L +  +LY+ RR +    DW+S+         NNN+S++E+GL K+ REMLPI++Y E+F V DT
Subjt:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

Q9SN28 RING-H2 finger protein ATL78.2e-1748.89Show/hide
Query:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        S  + +LKLYQ F+F +P+ FTFI+LF+ Y++YLRR      DW+S+ MR    V  NNN+S++E+GL K+ REMLP+++Y E+F V D+
Subjt:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

Arabidopsis top hitse value%identityAlignment
AT1G33480.1 RING/U-box superfamily protein8.1e-2049.07Show/hide
Query:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN
        M+Y + +P + YS A S        +PELKLYQ F+F +P+ FTFI+LFLFYL+YLRR  +D +S+ MR +  +  N++S+ E+GL KE REMLPI+V+ 
Subjt:  MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYN

Query:  ETFFVTDT
        E+F V D+
Subjt:  ETFFVTDT

AT4G10150.1 RING/U-box superfamily protein5.8e-1848.89Show/hide
Query:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        S  + +LKLYQ F+F +P+ FTFI+LF+ Y++YLRR      DW+S+ MR    V  NNN+S++E+GL K+ REMLP+++Y E+F V D+
Subjt:  SRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRR---RADWTSIRMRASAAV-NNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

AT4G10160.1 RING/U-box superfamily protein6.4e-0939.74Show/hide
Query:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT
        F+ C+P+    ++L +  +LY+ RR +    DW+S+         NNN+S++E+GL K+ REMLPI++Y E+F V DT
Subjt:  FVFCIPVLFTFILLFLFYLLYLRRRRA----DWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDT

AT4G24015.1 RING/U-box superfamily protein4.6e-0735.96Show/hide
Query:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL
        A +LKLYQ F+F IP+LF+ IL  LFYL YL+RR +  +S     + + +S   +++  S   + +K E ++ L ++++NE     D+L
Subjt:  APELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTS-----IRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATGACCATTTGGATCCATCTAAAGGCTATTCAGTTGCTGCTTCAGGACCAGGTCCAGTTTCAAGACCTGCACCTGAACTGAAGCTCTATCAGTTTTTTGTCTT
CTGTATTCCAGTTCTTTTCACTTTCATTCTTCTCTTCCTTTTCTATCTTCTTTATCTTCGTCGACGAAGGGCCGATTGGACTTCCATCCGAATGCGAGCTTCTGCTGCAG
TCAACAACAATAACGTCTCCTCATCTGAAGTTGGGTTGAAGAAGGAATTCAGAGAGATGCTGCCCATTATTGTGTACAATGAGACATTCTTTGTCACTGACACACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTATGACCATTTGGATCCATCTAAAGGCTATTCAGTTGCTGCTTCAGGACCAGGTCCAGTTTCAAGACCTGCACCTGAACTGAAGCTCTATCAGTTTTTTGTCTT
CTGTATTCCAGTTCTTTTCACTTTCATTCTTCTCTTCCTTTTCTATCTTCTTTATCTTCGTCGACGAAGGGCCGATTGGACTTCCATCCGAATGCGAGCTTCTGCTGCAG
TCAACAACAATAACGTCTCCTCATCTGAAGTTGGGTTGAAGAAGGAATTCAGAGAGATGCTGCCCATTATTGTGTACAATGAGACATTCTTTGTCACTGACACACTGTGA
Protein sequenceShow/hide protein sequence
MAYDHLDPSKGYSVAASGPGPVSRPAPELKLYQFFVFCIPVLFTFILLFLFYLLYLRRRRADWTSIRMRASAAVNNNNVSSSEVGLKKEFREMLPIIVYNETFFVTDTL