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Lag0039372 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039372
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlycerophosphodiester phosphodiesterase
Genome locationchr2:42317898..42318834
RNA-Seq ExpressionLag0039372
SyntenyLag0039372
Gene Ontology termsGO:0006071 - glycerol metabolic process (biological process)
GO:0006629 - lipid metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008889 - glycerophosphodiester phosphodiesterase activity (molecular function)
InterPro domainsIPR017946 - PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
IPR030395 - Glycerophosphodiester phosphodiesterase domain
IPR044236 - Glycerophosphodiester phosphodiesterase GDPD4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141522.1 glycerophosphodiester phosphodiesterase GDPD4 isoform X4 [Cucumis sativus]4.8e-6888.59Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLA +AILPPI+FHFKLKRFQQ+QQRNCKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSN+SKVGN+SMKE+    AV
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV

XP_011656047.1 glycerophosphodiester phosphodiesterase GDPD4 isoform X3 [Cucumis sativus]4.8e-6888.59Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLA +AILPPI+FHFKLKRFQQ+QQRNCKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSN+SKVGN+SMKE+    AV
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV

XP_031741801.1 glycerophosphodiester phosphodiesterase GDPD4 isoform X1 [Cucumis sativus]4.8e-6888.59Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLA +AILPPI+FHFKLKRFQQ+QQRNCKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSN+SKVGN+SMKE+    AV
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV

XP_031741802.1 glycerophosphodiester phosphodiesterase GDPD4 isoform X2 [Cucumis sativus]4.8e-6888.59Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLA +AILPPI+FHFKLKRFQQ+QQRNCKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSN+SKVGN+SMKE+    AV
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV

XP_038890900.1 glycerophosphodiester phosphodiesterase GDPD4 isoform X6 [Benincasa hispida]1.1e-6789.8Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIS +R GRRRWIG R  RNRFPFRFSSRRLFRLTILCLAF+AILPPI+FHFKLKRFQQMQQR CKWLN PPLVCAHGGDSSKAFPNTMDAY+ ALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADS
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKE+ A S
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADS

TrEMBL top hitse value%identityAlignment
A0A0A0KSR2 Glycerophosphodiester phosphodiesterase2.3e-6888.59Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLA +AILPPI+FHFKLKRFQQ+QQRNCKWL  PPLVCAHGGDSSKAFPNTMDAYSIALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSN+SKVGN+SMKE+    AV
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAV

A0A1S3CAB9 Glycerophosphodiester phosphodiesterase1.3e-6688.81Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLAF+AILPPI+FHFKLKR QQ+QQ+NC WL  PPLVCAHGGDSSKAFPNTMDAY+IALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGN+S KE+
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV

A0A1S3CAF8 Glycerophosphodiester phosphodiesterase1.3e-6688.81Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLAF+AILPPI+FHFKLKR QQ+QQ+NC WL  PPLVCAHGGDSSKAFPNTMDAY+IALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGN+S KE+
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV

A0A5A7TDK6 Glycerophosphodiester phosphodiesterase2.6e-6789.51Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAIST+R GRRRWIG RT RNRFPFRFSSRRLFRLTILCLAF+AILPPI+FHFKLKRFQQ+QQ+NC WL  PPLVCAHGGDSSKAFPNTMDAY+IALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGN+S KE+
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV

A0A6J1EPP0 Glycerophosphodiester phosphodiesterase4.8e-6687.41Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        M +S +R GRRRWIG RT RNRFPFR SSRR+F LTILCLA +AILPPIFFHFKLKRFQQMQQ  CKW+NDPPLVCAHGGDSSKAFPNTMDAYS+ALRSQ
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
        ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTS+VGNFSMKE+
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV

SwissProt top hitse value%identityAlignment
F4I8H8 Glycerophosphodiester phosphodiesterase GDPD48.8e-4158.04Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAI   RH RR + G  T R RF     SR   R  +  + F+AI PP++FHFKL+R +Q+  + C WL+ PPLVCAHGGDS+ AFPNTMDAYS A+RS+
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
         +CIEVDVSRSSDGVLFALH+RDLQRI  +++ +VG+ SMK++
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV

O14169 Phosphatidylglycerol phospholipase C1.1e-0644.83Show/hide
Query:  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITG
        PPLV AH G  +K   NT+ A+  A+++ A+C+E DV  + D V+  LHDR+L R+ G
Subjt:  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITG

P9WMU2 Probable glycerophosphodiester phosphodiesterase 13.9e-0435.21Show/hide
Query:  PLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
        P V AH G S+    +T+ AY +AL+  A+ +E DV  + DG L  +HDR L R T +    V   ++ ++
Subjt:  PLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV

P9WMU3 Probable glycerophosphodiester phosphodiesterase 13.9e-0435.21Show/hide
Query:  PLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
        P V AH G S+    +T+ AY +AL+  A+ +E DV  + DG L  +HDR L R T +    V   ++ ++
Subjt:  PLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV

Q99LY2 Lysophospholipase D GDPD38.6e-0435Show/hide
Query:  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITGSN
        P  + AH G S +   NTM+A   ++  +A+ +E D   + DGV+   HD++L R +G N
Subjt:  PPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSRSSDGVLFALHDRDLQRITGSN

Arabidopsis top hitse value%identityAlignment
AT1G71340.1 PLC-like phosphodiesterases superfamily protein6.3e-4258.04Show/hide
Query:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ
        MAI   RH RR + G  T R RF     SR   R  +  + F+AI PP++FHFKL+R +Q+  + C WL+ PPLVCAHGGDS+ AFPNTMDAYS A+RS+
Subjt:  MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQ

Query:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV
         +CIEVDVSRSSDGVLFALH+RDLQRI  +++ +VG+ SMK++
Subjt:  ANCIEVDVSRSSDGVLFALHDRDLQRITGSNTSKVGNFSMKEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCTCCACCGCTAGACATGGAAGGAGGCGTTGGATTGGGCACAGAACATTGCGCAATCGATTCCCCTTCAGATTTTCTTCCCGTCGACTCTTTCGTCTCACTAT
CCTATGCCTCGCTTTCATGGCAATTCTTCCTCCCATTTTCTTCCATTTCAAGCTCAAGCGCTTTCAGCAGATGCAACAAAGGAACTGCAAATGGCTGAATGATCCTCCTC
TTGTGTGTGCTCATGGGGGCGACTCATCCAAGGCCTTTCCGAACACTATGGATGCATATAGCATAGCTCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGT
TCTTCTGATGGAGTCTTATTTGCACTTCATGACAGGGACTTGCAGAGGATAACCGGATCAAATACTTCCAAAGTTGGAAATTTTAGCATGAAAGAGGTGAGTGCAGATTC
TGCTGTTCCGTTTGATATCTATATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCTCCACCGCTAGACATGGAAGGAGGCGTTGGATTGGGCACAGAACATTGCGCAATCGATTCCCCTTCAGATTTTCTTCCCGTCGACTCTTTCGTCTCACTAT
CCTATGCCTCGCTTTCATGGCAATTCTTCCTCCCATTTTCTTCCATTTCAAGCTCAAGCGCTTTCAGCAGATGCAACAAAGGAACTGCAAATGGCTGAATGATCCTCCTC
TTGTGTGTGCTCATGGGGGCGACTCATCCAAGGCCTTTCCGAACACTATGGATGCATATAGCATAGCTCTTCGTTCTCAAGCCAACTGCATTGAAGTTGATGTTTCTCGT
TCTTCTGATGGAGTCTTATTTGCACTTCATGACAGGGACTTGCAGAGGATAACCGGATCAAATACTTCCAAAGTTGGAAATTTTAGCATGAAAGAGGTGAGTGCAGATTC
TGCTGTTCCGTTTGATATCTATATTTAG
Protein sequenceShow/hide protein sequence
MAISTARHGRRRWIGHRTLRNRFPFRFSSRRLFRLTILCLAFMAILPPIFFHFKLKRFQQMQQRNCKWLNDPPLVCAHGGDSSKAFPNTMDAYSIALRSQANCIEVDVSR
SSDGVLFALHDRDLQRITGSNTSKVGNFSMKEVSADSAVPFDIYI