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Lag0039378 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039378
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr2:42460413..42461000
RNA-Seq ExpressionLag0039378
SyntenyLag0039378
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]6.1e-4453.11Show/hide
Query:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV
        FSNPPLNQ+LNQ+ ++KLDR N+LLWK LAL IL  Y+L+GHL+GE PCP   V +SA+ +N  +     +   A     AS ++  +  N L++ W+  
Subjt:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV

Query:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG
        D L LGWLYN MTP VA Q+MGF + ++LW A QD FGVQSR EED+LRQ+ Q  RKGN KM  YL  MK + DNLG
Subjt:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG

KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]3.8e-4652.36Show/hide
Query:  NSTGNSAATTGLTNFSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVI
        N+   S   T  T+F+NP LNQ+LNQ+T+IKLDRGN+LLWK LAL IL +Y+L+ HL GE PC P+ + ++      ++  A   S E    S +S AV+
Subjt:  NSTGNSAATTGLTNFSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVI

Query:  TKETNPLYKSWIAVDQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG
        T   NP Y+ WI  D L LGWLYN MTP+V  Q+MGF +A++LW A QDLFG+QSR +ED+L Q FQ  +KGN+ M  YLRTMKN+ +NLG
Subjt:  TKETNPLYKSWIAVDQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]6.1e-4453.11Show/hide
Query:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV
        FSNPPLNQ+LNQ+ ++KLDR N+LLWK LAL IL  Y+L+GHL+GE PCP   V +SA+ +N  +     +   A     AS ++  +  N L++ W+  
Subjt:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV

Query:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG
        D L LGWLYN MTP VA Q+MGF + ++LW A QD FGVQSR EED+LRQ+ Q  RKGN KM  YL  MK + DNLG
Subjt:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]3.8e-4657.39Show/hide
Query:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV
        F++PPLNQLLNQITSIK+DRGNFLLW+NLAL IL +Y+L  +L+G+KPCPP  +  + T TN  I G+ +S S             +   NP Y++WI V
Subjt:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV

Query:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNL
        D+L LGWLYN M   VA QVMGF +++ELW AVQ+LFGVQSR E DYL+QVFQQ  KG+++M  YL+ MK+HADNL
Subjt:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNL

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]1.1e-4055.31Show/hide
Query:  TSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASG-AVITK--------------ETNPLYKSWI
        T+IKLD+ N+LLW+NLAL IL +YRL+GHL+GE PCPPR     +  T+Q  A  V    EAG+  + SG A +T               + NP Y+S  
Subjt:  TSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASG-AVITK--------------ETNPLYKSWI

Query:  AVDQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG
         VDQL LGWLYNFMT +VA QVMG+E+ + LWAA+Q+LFG+QSR  EDYLRQVFQQ  KG MKM  YLR MK H+DNLG
Subjt:  AVDQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG

TrEMBL top hitse value%identityAlignment
A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X46.3e-3953.16Show/hide
Query:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV
        FSNPPLNQ+LNQ+T++KLDR N+LLWK LAL IL +Y+L+GHL+ E PCP   V +SA+ +N  +     +   A     AS ++  +  NPL++ W+  
Subjt:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV

Query:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKG
        D L LGWLYN MTP VA Q+MGF + ++LW A QD FGVQSR EED+LRQ+ Q  RKG
Subjt:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKG

A0A5A7SIT7 Uncharacterized protein2.9e-4453.11Show/hide
Query:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV
        FSNPPLNQ+LNQ+ ++KLDR N+LLWK LAL IL  Y+L+GHL+GE PCP   V +SA+ +N  +     +   A     AS ++  +  N L++ W+  
Subjt:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV

Query:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG
        D L LGWLYN MTP VA Q+MGF + ++LW A QD FGVQSR EED+LRQ+ Q  RKGN KM  YL  MK + DNLG
Subjt:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG

A0A5A7VPY0 Uncharacterized protein1.8e-4652.36Show/hide
Query:  NSTGNSAATTGLTNFSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVI
        N+   S   T  T+F+NP LNQ+LNQ+T+IKLDRGN+LLWK LAL IL +Y+L+ HL GE PC P+ + ++      ++  A   S E    S +S AV+
Subjt:  NSTGNSAATTGLTNFSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVI

Query:  TKETNPLYKSWIAVDQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG
        T   NP Y+ WI  D L LGWLYN MTP+V  Q+MGF +A++LW A QDLFG+QSR +ED+L Q FQ  +KGN+ M  YLRTMKN+ +NLG
Subjt:  TKETNPLYKSWIAVDQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG

A0A5D3BCH9 Uncharacterized protein2.9e-4453.11Show/hide
Query:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV
        FSNPPLNQ+LNQ+ ++KLDR N+LLWK LAL IL  Y+L+GHL+GE PCP   V +SA+ +N  +     +   A     AS ++  +  N L++ W+  
Subjt:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV

Query:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG
        D L LGWLYN MTP VA Q+MGF + ++LW A QD FGVQSR EED+LRQ+ Q  RKGN KM  YL  MK + DNLG
Subjt:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG

A0A6J1DCW4 uncharacterized protein LOC1110195981.8e-4657.39Show/hide
Query:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV
        F++PPLNQLLNQITSIK+DRGNFLLW+NLAL IL +Y+L  +L+G+KPCPP  +  + T TN  I G+ +S S             +   NP Y++WI V
Subjt:  FSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNPLYKSWIAV

Query:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNL
        D+L LGWLYN M   VA QVMGF +++ELW AVQ+LFGVQSR E DYL+QVFQQ  KG+++M  YL+ MK+HADNL
Subjt:  DQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCATCAATTCCACCGGAAATTCTGCCGCTACCACCGGATTGACTAATTTCAGCAACCCACCGTTGAATCAACTCTTGAATCAAATTACCTCTATAAAACTTGA
TAGAGGTAACTTCTTACTCTGGAAAAACTTAGCCCTTTCGATTCTTTGTAACTATAGACTAGATGGGCATCTGTCTGGGGAAAAACCTTGCCCACCAAGATCAGTGAGGG
TTTCAGCAACTGGAACCAATCAGATGATTGCAGGAGCAGTTGCATCAAGCTCAGAAGCAGGGGTAGCAAGTGAAGCTTCTGGAGCAGTGATTACTAAGGAAACAAATCCT
TTGTACAAGTCATGGATTGCAGTGGATCAATTATGGTTAGGATGGTTGTATAATTTCATGACTCCTAAAGTAGCTACGCAAGTTATGGGTTTCGAAAGTGCACAAGAGTT
GTGGGCGGCTGTGCAAGATTTGTTTGGTGTTCAGTCTAGGGTTGAAGAAGATTACCTTAGACAAGTGTTTCAACAATGCAGGAAAGGAAACATGAAGATGGCTAATTATT
TGCGGACGATGAAAAACCACGCCGACAATCTGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGCATCAATTCCACCGGAAATTCTGCCGCTACCACCGGATTGACTAATTTCAGCAACCCACCGTTGAATCAACTCTTGAATCAAATTACCTCTATAAAACTTGA
TAGAGGTAACTTCTTACTCTGGAAAAACTTAGCCCTTTCGATTCTTTGTAACTATAGACTAGATGGGCATCTGTCTGGGGAAAAACCTTGCCCACCAAGATCAGTGAGGG
TTTCAGCAACTGGAACCAATCAGATGATTGCAGGAGCAGTTGCATCAAGCTCAGAAGCAGGGGTAGCAAGTGAAGCTTCTGGAGCAGTGATTACTAAGGAAACAAATCCT
TTGTACAAGTCATGGATTGCAGTGGATCAATTATGGTTAGGATGGTTGTATAATTTCATGACTCCTAAAGTAGCTACGCAAGTTATGGGTTTCGAAAGTGCACAAGAGTT
GTGGGCGGCTGTGCAAGATTTGTTTGGTGTTCAGTCTAGGGTTGAAGAAGATTACCTTAGACAAGTGTTTCAACAATGCAGGAAAGGAAACATGAAGATGGCTAATTATT
TGCGGACGATGAAAAACCACGCCGACAATCTGGGATAA
Protein sequenceShow/hide protein sequence
MTSINSTGNSAATTGLTNFSNPPLNQLLNQITSIKLDRGNFLLWKNLALSILCNYRLDGHLSGEKPCPPRSVRVSATGTNQMIAGAVASSSEAGVASEASGAVITKETNP
LYKSWIAVDQLWLGWLYNFMTPKVATQVMGFESAQELWAAVQDLFGVQSRVEEDYLRQVFQQCRKGNMKMANYLRTMKNHADNLG