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Lag0039388 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039388
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr2:42841290..42842203
RNA-Seq ExpressionLag0039388
SyntenyLag0039388
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]8.7e-3851.39Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + ++ ++  C P D+I Y +  HG+NISYDKAWRGRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   R
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM++AAS+D W +C  VISVDG ++KNK+  TL++ACT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.2e-3649.31Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + ++ ++  C P ++I Y +  H +N+SYDKAWRGRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D    
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM +AAS+D W +C PVISVDG ++KNK+  TL++ACT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

TYK21259.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]4.3e-3745.74Show/hide
Query:  DCCVVVDVQGVDTTIHNGGAVASSSREETNFEFVNSDGIDMLT-DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRG
        D  +VVD   V T I N   ++S   E    E   ++ I M + D++     QAT+ +  E +K + +  ++  C P D+I Y +  HG NISYDKAWRG
Subjt:  DCCVVVDVQGVDTTIHNGGAVASSSREETNFEFVNSDGIDMLT-DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRG

Query:  REKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDRFKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
         E ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   RFKF+FM++AAS+D W +C PVISV+G ++KNK+  TL++ACT +
Subjt:  REKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDRFKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.0e-3852.08Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + +  ++  C P D+I Y +  HG+NISYDKAWRGRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   R
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM++AAS+D W +C PVISVDG ++KNK+  TL++ACT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]5.7e-3750Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + +  +++ C P D+I Y +  H +NISYDKAW GRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   R
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM++AAS+D W +C PVISVDG ++KNK+  TL++ CT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958992.7e-3750Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + +  +++ C P D+I Y +  H +NISYDKAW GRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   R
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM++AAS+D W +C PVISVDG ++KNK+  TL++ CT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

A0A5A7V1Z6 CCHC-type domain-containing protein4.2e-3851.39Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + ++ ++  C P D+I Y +  HG+NISYDKAWRGRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   R
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM++AAS+D W +C  VISVDG ++KNK+  TL++ACT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

A0A5A7VAU3 MuDRA-like transposase1.0e-3649.31Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + ++ ++  C P ++I Y +  H +N+SYDKAWRGRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D    
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM +AAS+D W +C PVISVDG ++KNK+  TL++ACT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

A0A5D3DDB9 Protein FAR1-RELATED SEQUENCE 42.1e-3745.74Show/hide
Query:  DCCVVVDVQGVDTTIHNGGAVASSSREETNFEFVNSDGIDMLT-DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRG
        D  +VVD   V T I N   ++S   E    E   ++ I M + D++     QAT+ +  E +K + +  ++  C P D+I Y +  HG NISYDKAWRG
Subjt:  DCCVVVDVQGVDTTIHNGGAVASSSREETNFEFVNSDGIDMLT-DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRG

Query:  REKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDRFKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
         E ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   RFKF+FM++AAS+D W +C PVISV+G ++KNK+  TL++ACT +
Subjt:  REKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDRFKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

A0A5D3E198 MuDRA-like transposase5.0e-3952.08Show/hide
Query:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR
        D++     QAT+ +  E +K + +  ++  C P D+I Y +  HG+NISYDKAWRGRE ALN +RG PE+SYA +SAF+  LI  NPGTYT +E D   R
Subjt:  DILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRGREKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDR

Query:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE
        FKF+FM++AAS+D W +C PVISVDG ++KNK+  TL++ACT +
Subjt:  FKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAACGAGTCTCAGAATGGCACGTACAAGGATTGTTGTGTAGTTGTGGACGTGCAGGGGGTAGATACTACTATACACAACGGAGGGGCGGTCGCAAGCTCATCCCG
GGAGGAGACAAATTTTGAGTTTGTTAACTCAGATGGGATTGACATGTTGACCGACATATTACCTATATCGAAGGGGCAAGCGACGACGAGTGTTGCATGTGAGTATTCAA
AGACTTTGATGAGGATCACTAACAGGATGCACTGTATACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGGGGT
AGAGAAAAGGCGTTAAATGAGTTGAGAGGACCTCCTGAAGAGTCTTATGCTCAAATTTCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCACCCA
GGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGTATTGCAGCATCCATGGACGAGTGGAAACACTGTTTCCCGGTTATTTCTGTAGATGGTACATCTTTGA
AGAATAAATTCAGTGACACCCTTTTGACGGCCTGCACATTTGAGGTGAGACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAACGAGTCTCAGAATGGCACGTACAAGGATTGTTGTGTAGTTGTGGACGTGCAGGGGGTAGATACTACTATACACAACGGAGGGGCGGTCGCAAGCTCATCCCG
GGAGGAGACAAATTTTGAGTTTGTTAACTCAGATGGGATTGACATGTTGACCGACATATTACCTATATCGAAGGGGCAAGCGACGACGAGTGTTGCATGTGAGTATTCAA
AGACTTTGATGAGGATCACTAACAGGATGCACTGTATACCTCGGGACATAATAGAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGGGGT
AGAGAAAAGGCGTTAAATGAGTTGAGAGGACCTCCTGAAGAGTCTTATGCTCAAATTTCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCACCCA
GGAAGTTGATTCAAATGACAGGTTCAAATTCTTCTTCATGAGTATTGCAGCATCCATGGACGAGTGGAAACACTGTTTCCCGGTTATTTCTGTAGATGGTACATCTTTGA
AGAATAAATTCAGTGACACCCTTTTGACGGCCTGCACATTTGAGGTGAGACTTTAA
Protein sequenceShow/hide protein sequence
MVNESQNGTYKDCCVVVDVQGVDTTIHNGGAVASSSREETNFEFVNSDGIDMLTDILPISKGQATTSVACEYSKTLMRITNRMHCIPRDIIEYARKTHGINISYDKAWRG
REKALNELRGPPEESYAQISAFAARLIERNPGTYTTQEVDSNDRFKFFFMSIAASMDEWKHCFPVISVDGTSLKNKFSDTLLTACTFEVRL