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Lag0039391 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039391
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr2:42851265..42854659
RNA-Seq ExpressionLag0039391
SyntenyLag0039391
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025376.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-2070.89Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
        MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KIELD+ EVAQ+N   I+  S
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
KAA0066166.1 Retrotransposon gag protein [Cucumis melo var. makuwa]3.2e-2171.05Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
        MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK +ILKL  E KIELD+YEVAQ+N   ++
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.5e-2172.15Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
        MLEQLLE QLI+LPKCKRPK+ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KIEL++ EVAQ+N   I+  S
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-2070.89Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
        MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KIELD+ EVAQ+N   I+  S
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
TYK15207.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.4e-2171.05Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
        MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK++ILKL  E KIELD+YEVAQ+N   ++
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
TrEMBL top hitse value%identityAlignment
A0A5A7SHQ6 Retrotransposon gag protein5.9e-2170.89Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
        MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KIELD+ EVAQ+N   I+  S
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
A0A5A7VII4 Retrotransposon gag protein1.6e-2171.05Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
        MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK +ILKL  E KIELD+YEVAQ+N   ++
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
A0A5D3BX77 Retrotransposon gag protein2.6e-2172.15Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
        MLEQLLE QLI+LPKCKRPK+ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KIEL++ EVAQ+N   I+  S
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
A0A5D3CD55 Ty3-gypsy retrotransposon protein5.9e-2170.89Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
        MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KIELD+ EVAQ+N   I+  S
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKS
A0A5D3CTF5 Retrotransposon gag protein7.0e-2271.05Show/hide
Query:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
        MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK++ILKL  E KIELD+YEVAQ+N   ++
Subjt:  MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27680.1 RECQ helicase SIM1.3e-0466.67Show/hide
Query:  QSLKFAATDLLWWRGLARILEAKGYLK
        Q  KF  TD LWW+GLARI+EA+GY+K
Subjt:  QSLKFAATDLLWWRGLARILEAKGYLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAACAACTACTAGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAAAAGAGAGGGAGAAAGTCGATGATCCCAAGCATTGCAAGTATCATCGAGTTAT
TGGTCATCCAGTGGAAAGATGTTTCGTCTTAAAGGACTTAATTCTAAAGCTAGTTGTGGAAGGAAAAATTGAGCTCGACCTTTATGAAGTAGCTCAATCAAATCTTGCTA
CAATCAAAGAAAAGAGCAAGCATCAAAGAAAGAATGATCCTAAGAAACCTCAACCCAAGAGGAAGAGAAGTAAAAAGTGTTCTCAACCTCGACAACCGGTGACTGTGAAA
GAGATCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAACTTTGCAACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGCTCCGGATTATTCAA
ATCGACGACCGATTTAGAAGTTTCGGAACTCTCTTCTGCCGCTATAGATCGTCTCGTTCCGAGATTTGGTTCTGCATCGCGAGTTTCGACGAGTTTTGTGCCGATCAGAT
TTTTTGAGCAAACGACATCTATGGTGCGTCATTTTCATTCTTTGAGCTTCCAAAAGCAGCCATTATTCGGTGTTGTTTATGGCTGTAGGGTAGTTTGTTTCCTGCATCCT
GGAGTTAGAGATGTTTTGAAGAAAACTTTCCTAAGCTGTCTCTATCCAACTGCACCCAGGAAACTTCTTCAGCTTCCTCTTATCATCATCCTCTTCAGCTTCCTCTTATT
CATCATCCTCTTCAGCTTCACAACATGTCCCCAGCTCCCTGCATTAGCATACAGATCTGACAACAGCAGGCTATTCCCAACACCCCAGTCTCTGAAATTCGCAGCAACTG
ATTTGCTCTGGTGGCGAGGTCTTGCAAGAATTTTGGAAGCTAAAGGTTACTTGAAAGGAGATAACAGGGTAATAGTAATAGTTGTATGGGCTATCCTGCAGTTATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAACAACTACTAGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAAAAGAGAGGGAGAAAGTCGATGATCCCAAGCATTGCAAGTATCATCGAGTTAT
TGGTCATCCAGTGGAAAGATGTTTCGTCTTAAAGGACTTAATTCTAAAGCTAGTTGTGGAAGGAAAAATTGAGCTCGACCTTTATGAAGTAGCTCAATCAAATCTTGCTA
CAATCAAAGAAAAGAGCAAGCATCAAAGAAAGAATGATCCTAAGAAACCTCAACCCAAGAGGAAGAGAAGTAAAAAGTGTTCTCAACCTCGACAACCGGTGACTGTGAAA
GAGATCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAACTTTGCAACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGCTCCGGATTATTCAA
ATCGACGACCGATTTAGAAGTTTCGGAACTCTCTTCTGCCGCTATAGATCGTCTCGTTCCGAGATTTGGTTCTGCATCGCGAGTTTCGACGAGTTTTGTGCCGATCAGAT
TTTTTGAGCAAACGACATCTATGGTGCGTCATTTTCATTCTTTGAGCTTCCAAAAGCAGCCATTATTCGGTGTTGTTTATGGCTGTAGGGTAGTTTGTTTCCTGCATCCT
GGAGTTAGAGATGTTTTGAAGAAAACTTTCCTAAGCTGTCTCTATCCAACTGCACCCAGGAAACTTCTTCAGCTTCCTCTTATCATCATCCTCTTCAGCTTCCTCTTATT
CATCATCCTCTTCAGCTTCACAACATGTCCCCAGCTCCCTGCATTAGCATACAGATCTGACAACAGCAGGCTATTCCCAACACCCCAGTCTCTGAAATTCGCAGCAACTG
ATTTGCTCTGGTGGCGAGGTCTTGCAAGAATTTTGGAAGCTAAAGGTTACTTGAAAGGAGATAACAGGGTAATAGTAATAGTTGTATGGGCTATCCTGCAGTTATGGTAG
Protein sequenceShow/hide protein sequence
MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKSKHQRKNDPKKPQPKRKRSKKCSQPRQPVTVK
EIFSKTFHKKEKENFATSYYIDVEEVDNSKKGSGLFKSTTDLEVSELSSAAIDRLVPRFGSASRVSTSFVPIRFFEQTTSMVRHFHSLSFQKQPLFGVVYGCRVVCFLHP
GVRDVLKKTFLSCLYPTAPRKLLQLPLIIILFSFLLFIILFSFTTCPQLPALAYRSDNSRLFPTPQSLKFAATDLLWWRGLARILEAKGYLKGDNRVIVIVVWAILQLW