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Lag0039422 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039422
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:43428524..43428853
RNA-Seq ExpressionLag0039422
SyntenyLag0039422
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.1e-0944.76Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSE-------AISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKT
        +SADQYAMDLGFT+V           ++ F   I S +E       + +L   +  V QMRP   P++PSS+++ S+ PTT+  AV P KRFVP+PEIK+
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSE-------AISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKT

Query:  YFEKP
        YF+KP
Subjt:  YFEKP

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]1.0e-0843.56Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK
        M++DQYAMDL FT+V  S+++    S+ R      S++      +L   +  V QMRP   P++PSS+++ S+ PTT+  AV P KRFVP+P+IK+YF+K
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK

Query:  P
        P
Subjt:  P

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]1.1e-1045.92Show/hide
Query:  ADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK
        ADQYAM++GFT+V  S+++    SN R   +  ST+    +++L H +  V QMRP   P++PSS+++ S+  TT+  AV P KRFVP+PEIK+YF+K
Subjt:  ADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]3.5e-0945Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK
        MSADQYAMDLGFT+V  S+++    S+ R      S++    + +L        QMRP   P++PSS+++ S+ PTT+   V P KRFVP+PEIK+YF+K
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]2.1e-0943.88Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSEAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEKP
        MSADQY MDLGFT+V  S+++      +             +L   +  V QMRP   P++PSS+++ S+ PTT+  AV P KRFVP+P+IK+YF+KP
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSEAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEKP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.0e-0944.76Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSE-------AISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKT
        +SADQYAMDLGFT+V           ++ F   I S +E       + +L   +  V QMRP   P++PSS+++ S+ PTT+  AV P KRFVP+PEIK+
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSE-------AISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKT

Query:  YFEKP
        YF+KP
Subjt:  YFEKP

A0A5A7URC1 Uncharacterized protein5.0e-0943.56Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK
        M++DQYAMDL FT+V  S+++    S+ R      S++      +L   +  V QMRP   P++PSS+++ S+ PTT+  AV P KRFVP+P+IK+YF+K
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK

Query:  P
        P
Subjt:  P

A0A5D3BM67 Uncharacterized protein1.7e-0945Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK
        MSADQYAMDLGFT+V  S+++    S+ R      S++    + +L        QMRP   P++PSS+++ S+ PTT+   V P KRFVP+PEIK+YF+K
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK

A0A5D3BPD3 Uncharacterized protein5.3e-1145.92Show/hide
Query:  ADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK
        ADQYAM++GFT+V  S+++    SN R   +  ST+    +++L H +  V QMRP   P++PSS+++ S+  TT+  AV P KRFVP+PEIK+YF+K
Subjt:  ADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTS---EAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEK

A0A5D3CKX1 Uncharacterized protein1.0e-0943.88Show/hide
Query:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSEAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEKP
        MSADQY MDLGFT+V  S+++      +             +L   +  V QMRP   P++PSS+++ S+ PTT+  AV P KRFVP+P+IK+YF+KP
Subjt:  MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSEAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCAGATCAATATGCGATGGATCTGGGTTTTACTTCGGTGAATTGCTCCAAGAACCAGAAATGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCAC
CTCTGAGGCCATCAGCCTCTCTCATACTACCTACTGCGTAACTCAAATGAGACCTTTAGTCTCTCCTTCTACACCGTCTTCATCTCAACAGGGATCTTCAATCCCCACAA
CCTTTGTCGATGCAGTCAATCCACCAAAAAGATTCGTTCCAAAACCCGAAATAAAAACTTATTTTGAAAAACCTTCCAATTTCAGAACCAATAGTCGAACCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCAGATCAATATGCGATGGATCTGGGTTTTACTTCGGTGAATTGCTCCAAGAACCAGAAATGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCAC
CTCTGAGGCCATCAGCCTCTCTCATACTACCTACTGCGTAACTCAAATGAGACCTTTAGTCTCTCCTTCTACACCGTCTTCATCTCAACAGGGATCTTCAATCCCCACAA
CCTTTGTCGATGCAGTCAATCCACCAAAAAGATTCGTTCCAAAACCCGAAATAAAAACTTATTTTGAAAAACCTTCCAATTTCAGAACCAATAGTCGAACCCGAATTTGA
Protein sequenceShow/hide protein sequence
MSADQYAMDLGFTSVNCSKNQKCIDSNKRFNGVINSTSEAISLSHTTYCVTQMRPLVSPSTPSSSQQGSSIPTTFVDAVNPPKRFVPKPEIKTYFEKPSNFRTNSRTRI