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Lag0039442 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039442
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr2:43785327..43786106
RNA-Seq ExpressionLag0039442
SyntenyLag0039442
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]1.3e-3453.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]1.3e-3453.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]1.3e-3453.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]1.3e-3453.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

XP_038887015.1 uncharacterized protein LOC120077182 [Benincasa hispida]7.9e-3756.76Show/hide
Query:  GNTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEGGTSGASSFTAESPIN
        G +T FS+PPLNQLLNQIT  KL+RG F+LWK LALP+LR YKLE HL GTK C     + ++ +  T     D G+ +S        GASS T E   N
Subjt:  GNTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEGGTSGASSFTAESPIN

Query:  PLYEAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        PLYE W+T DQLLLGW YNSMT EVA Q+MGH++AK+LW+AI++LFG+
Subjt:  PLYEAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X16.1e-3553.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X46.1e-3553.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X36.1e-3553.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X56.1e-3553.79Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+TT+KLDR N+LLWK LALP+L+ YKLEGHL    PCPS  V+ + +++TT             T+EG   T GASS      +NPL+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

A0A5A7SIT7 Uncharacterized protein4.0e-3453.1Show/hide
Query:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY
        FS+PPLNQ+LNQ+ T+KLDR N+LLWK LALP+L+ YKLEGHL G  PCPS  V+ + +++TT             T+EG   T GASS      +N L+
Subjt:  FSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYKLEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEG--GTSGASSFTAESPINPLY

Query:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI
        E W+TTD LLLGWLYNSMT +VA Q+MG  N + LW+A  + FG+
Subjt:  EAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACATCAGTCAAGATGGCACAATCAGCAAAGGAATGAACACCTCAGCAACCACATAATTGGAAATTCCAGAAGATTCTTATTAACCAATTCTGTTATTGAGAATTC
TGTCATTTTGTACAAAATCCTTTATTCTTGGGTTTCTGTCCTTCTCTCTGTAATAATTCGTTATTTTGTATTCTGGTGCCTTTTTGCCACCGGAAATACCACCACATTCA
GCAGCCCTCCTCTTAATCAGTTGCTAAATCAAATTACAACGATCAAGCTGGATAGAGGGAACTTCCTCTTGTGGAAAAACCTAGCCCTACCAGTTTTGAGGAGCTACAAA
CTTGAGGGTCACCTTTTAGGCACAAAACCTTGTCCTTCCAAGTGTGTTATTCAATCTGTGACCGCCGATACAACCGCTGCAACCACAATTGATGGAGGAGCTTCGAGCTC
AGCAACCCAAGAAGGAGGTACTTCAGGAGCTTCAAGTTTTACTGCTGAATCACCGATAAATCCACTCTACGAAGCATGGATTACTACCGACCAACTGCTGTTAGGTTGGC
TCTACAATTCCATGACTGTGGAAGTCGCAACGCAAGTCATGGGCCATGATAATGCCAAAGCACTGTGGGAAGCAATCAACAATCTCTTCGGAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACATCAGTCAAGATGGCACAATCAGCAAAGGAATGAACACCTCAGCAACCACATAATTGGAAATTCCAGAAGATTCTTATTAACCAATTCTGTTATTGAGAATTC
TGTCATTTTGTACAAAATCCTTTATTCTTGGGTTTCTGTCCTTCTCTCTGTAATAATTCGTTATTTTGTATTCTGGTGCCTTTTTGCCACCGGAAATACCACCACATTCA
GCAGCCCTCCTCTTAATCAGTTGCTAAATCAAATTACAACGATCAAGCTGGATAGAGGGAACTTCCTCTTGTGGAAAAACCTAGCCCTACCAGTTTTGAGGAGCTACAAA
CTTGAGGGTCACCTTTTAGGCACAAAACCTTGTCCTTCCAAGTGTGTTATTCAATCTGTGACCGCCGATACAACCGCTGCAACCACAATTGATGGAGGAGCTTCGAGCTC
AGCAACCCAAGAAGGAGGTACTTCAGGAGCTTCAAGTTTTACTGCTGAATCACCGATAAATCCACTCTACGAAGCATGGATTACTACCGACCAACTGCTGTTAGGTTGGC
TCTACAATTCCATGACTGTGGAAGTCGCAACGCAAGTCATGGGCCATGATAATGCCAAAGCACTGTGGGAAGCAATCAACAATCTCTTCGGAATTTAG
Protein sequenceShow/hide protein sequence
MPHQSRWHNQQRNEHLSNHIIGNSRRFLLTNSVIENSVILYKILYSWVSVLLSVIIRYFVFWCLFATGNTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLALPVLRSYK
LEGHLLGTKPCPSKCVIQSVTADTTAATTIDGGASSSATQEGGTSGASSFTAESPINPLYEAWITTDQLLLGWLYNSMTVEVATQVMGHDNAKALWEAINNLFGI