; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039451 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039451
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr2:43975307..43975795
RNA-Seq ExpressionLag0039451
SyntenyLag0039451
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.2e-1439.13Show/hide
Query:  KQQPCESLRDYITT----------------------GLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRYSSSDHDSKKDKRQRTD
        +++  ESL DY+T                       G+ DE L  S GK  P T+ E +SRAQ+YM+A E   SKR E   KR +    +   DK Q + 
Subjt:  KQQPCESLRDYITT----------------------GLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRYSSSDHDSKKDKRQRTD

Query:  ERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFH
           R R  Q D  +KFEKYT T+VP EQ+LMEI+N  LL  P ++ ++   R K +YCLFH
Subjt:  ERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFH

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.3e-2041.01Show/hide
Query:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY
        +G R + +P   LLT+KQ+  ESLRDY+                       +G+ DE L  S GK  P T+ E +SRAQ+YM+A E   SKR E + KR 
Subjt:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY

Query:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        +    +   DK Q +    R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K++   R K +YCLFHR
Subjt:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]4.0e-1745.11Show/hide
Query:  TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKEL------LKSKRLEREHKRYSSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQI
        +G++DE L  S GK  P T+ E +SRAQKYM+A+E       L+ KR +++ +R       SK +K+    +RV G   Q D  +KFEKYTPT+VP EQ+
Subjt:  TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKEL------LKSKRLEREHKRYSSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQI

Query:  LMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        LMEI++  LL  P  +K+ P+ R K +YCLFHR
Subjt:  LMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.9e-1940.45Show/hide
Query:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY
        +G R + +P   LLT+KQ+  ESL DY+                       +G+ DE L  S GK  P T+ E +SRAQ+YM+A E   SKR E + KR 
Subjt:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY

Query:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        +    +   DK Q +    R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K     R K +YCLFHR
Subjt:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]4.4e-1634.41Show/hide
Query:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY
        +GAR+Q+ P    L VKQ   ESL+D IT                       GL+  +   S+ K+  RT+ E +SRAQKY N  EL  +       KR 
Subjt:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY

Query:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKK--------FEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        ++SD     +KR+  +E+++ +       KK        F +YTP ++P+EQ+LM+IRN +LL  P+ +K  P+ RD+S+YC +HR
Subjt:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKK--------FEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.0e-1439.13Show/hide
Query:  KQQPCESLRDYITT----------------------GLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRYSSSDHDSKKDKRQRTD
        +++  ESL DY+T                       G+ DE L  S GK  P T+ E +SRAQ+YM+A E   SKR E   KR +    +   DK Q + 
Subjt:  KQQPCESLRDYITT----------------------GLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRYSSSDHDSKKDKRQRTD

Query:  ERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFH
           R R  Q D  +KFEKYT T+VP EQ+LMEI+N  LL  P ++ ++   R K +YCLFH
Subjt:  ERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFH

A0A6J1DWY0 uncharacterized protein LOC1110252931.1e-2041.01Show/hide
Query:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY
        +G R + +P   LLT+KQ+  ESLRDY+                       +G+ DE L  S GK  P T+ E +SRAQ+YM+A E   SKR E + KR 
Subjt:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY

Query:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        +    +   DK Q +    R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K++   R K +YCLFHR
Subjt:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

A0A6J1DYL6 uncharacterized protein LOC1110257859.3e-2040.45Show/hide
Query:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY
        +G R + +P   LLT+KQ+  ESL DY+                       +G+ DE L  S GK  P T+ E +SRAQ+YM+A E   SKR E + KR 
Subjt:  MGAREQRKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRY

Query:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        +    +   DK Q +    R R  Q D  +KFEKYTPT+VP EQ+LMEI++  LL  P ++K     R K +YCLFHR
Subjt:  SSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

A0A6J1DZ52 uncharacterized protein LOC1110256121.9e-1745.11Show/hide
Query:  TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKEL------LKSKRLEREHKRYSSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQI
        +G++DE L  S GK  P T+ E +SRAQKYM+A+E       L+ KR +++ +R       SK +K+    +RV G   Q D  +KFEKYTPT+VP EQ+
Subjt:  TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKEL------LKSKRLEREHKRYSSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQI

Query:  LMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        LMEI++  LL  P  +K+ P+ R K +YCLFHR
Subjt:  LMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

A0A6J1E1B3 uncharacterized protein LOC1110255211.4e-1230.05Show/hide
Query:  RKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSK---------------
        RK   +L T++Q+  E+L++Y+T                      TGL DE L   +G+  P T+ E + +A+K ++ +ELL++K               
Subjt:  RKPHINLLTVKQQPCESLRDYIT----------------------TGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSK---------------

Query:  ---RLEREHKRYSSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNT---NLLNAPRKLKSNPDNRDKSQYCLFHR
           + + + K   SS   S+ D R+    R R RP        +E+YTPT++P  +IL  I  T    LL  P+KL+ +P+ R+K +YC FHR
Subjt:  ---RLEREHKRYSSSDHDSKKDKRQRTDERVRGRPDQGDYLKKFEKYTPTSVPQEQILMEIRNT---NLLNAPRKLKSNPDNRDKSQYCLFHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCATGTGAGAGCTTGCGTGATTACATAACAACTGGATTGGAAGACGAAAGACT
GCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGTAGAGTTCGTCTCCCGGGCACAGAAATACATGAACGCAAAGGAGTTACTGAAATCAAAAAGGTTAGAACGAG
AGCACAAAAGATATTCTTCATCTGACCACGACAGTAAAAAGGACAAGAGGCAGCGGACAGACGAAAGAGTTCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTT
GAAAAGTACACCCCTACTTCAGTCCCACAGGAGCAGATCTTGATGGAGATACGGAATACAAACCTGCTCAACGCGCCCAGGAAACTGAAGTCAAATCCTGACAATAGAGA
CAAAAGCCAGTATTGTCTCTTCCATCGATCAGGAACTGCATTCAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCATGTGAGAGCTTGCGTGATTACATAACAACTGGATTGGAAGACGAAAGACT
GCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGTAGAGTTCGTCTCCCGGGCACAGAAATACATGAACGCAAAGGAGTTACTGAAATCAAAAAGGTTAGAACGAG
AGCACAAAAGATATTCTTCATCTGACCACGACAGTAAAAAGGACAAGAGGCAGCGGACAGACGAAAGAGTTCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTT
GAAAAGTACACCCCTACTTCAGTCCCACAGGAGCAGATCTTGATGGAGATACGGAATACAAACCTGCTCAACGCGCCCAGGAAACTGAAGTCAAATCCTGACAATAGAGA
CAAAAGCCAGTATTGTCTCTTCCATCGATCAGGAACTGCATTCAGCTAA
Protein sequenceShow/hide protein sequence
MGAREQRKPHINLLTVKQQPCESLRDYITTGLEDERLLNSIGKSQPRTYVEFVSRAQKYMNAKELLKSKRLEREHKRYSSSDHDSKKDKRQRTDERVRGRPDQGDYLKKF
EKYTPTSVPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRSGTAFS