; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039452 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039452
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr2:43996679..43997068
RNA-Seq ExpressionLag0039452
SyntenyLag0039452
Gene Ontology termsGO:0009228 - thiamine biosynthetic process (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008972 - phosphomethylpyrimidine kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038878070.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Benincasa hispida]2.6e-4374.17Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GI +VLTLTVDN SSNDT IAYL KRFKHG +L+G+FLH+R CAHILNLI+ DGLKDV++++ RIR+VVRFVRSSPAR AKFKKCIEEENISS S+LCLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAAKNLRR
        V T WNSTYL+L+A + L +
Subjt:  VPTRWNSTYLMLEAAKNLRR

XP_038889294.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]9.6e-4680.87Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GI+KV+TLTVDN SSNDTAIAYL KRFKHGLVLDGEFLHVRCCAHILNLIV DGL+D+++S+ RIR+ VRFVRSSPAR   FKKCI++ENI S S+LCLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPT WNSTYLMLEAA
Subjt:  VPTRWNSTYLMLEAA

XP_038890289.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]1.1e-4479.13Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GIE+V+ LTVDN SSNDT IAYL KRFKHGLVLDGEFLHVRCCAHILNLIV DGLKDV++S+ RIR+ V+FVRSSP R A FKKCI+EENI+S S+LCLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPTRW+ST+ MLEAA
Subjt:  VPTRWNSTYLMLEAA

XP_038895827.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]2.0e-4378.26Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GIE V+TLTVDN SSNDT IAYL KRFKHGLVLDGEFLHVRCCAHILNLIV D LK +++S+ RIR+ VRFVR SP R   FKKCI EENI S S+LCLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPTRWNSTYLML+AA
Subjt:  VPTRWNSTYLMLEAA

XP_038896277.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]1.5e-4382.57Show/hide
Query:  LTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLDVPTRW
        +TLTVDN SSNDTAIAYL K FKHGLVLDGEFLHVRCCAHILNLIV DGLKD+++S+ RIR+ VRFVRSSPAR A FKKCI+E NI S S+LCLDVPTRW
Subjt:  LTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLDVPTRW

Query:  NSTYLMLEA
        NSTYLMLEA
Subjt:  NSTYLMLEA

TrEMBL top hitse value%identityAlignment
A0A5D3BX83 Zinc finger BED domain-containing protein RICESLEEPER 3-like5.9e-4172.17Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GIE+V+TLTVDN SSNDTA+AYL+KRF  GL+  GEFLHVRCCAHILNLIV D  K+ ++ + RIR  VRF+RSSPARF KFKKCIE E I+  S +CLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPTRWNSTY+MLEAA
Subjt:  VPTRWNSTYLMLEAA

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like5.9e-4172.17Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GIE+V+TLTVDN SSNDTA+AYL+KRF  GL+  GEFLHVRCCAHILNLIV D  K+ ++ + RIR  VRF+RSSPARF KFKKCIE E I+  S +CLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPTRWNSTY+MLEAA
Subjt:  VPTRWNSTYLMLEAA

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like5.9e-4172.17Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GIE+V+TLTVDN SSNDTA+AYL+KRF  GL+  GEFLHVRCCAHILNLIV D  K+ ++ + RIR  VRF+RSSPARF KFKKCIE E I+  S +CLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPTRWNSTY+MLEAA
Subjt:  VPTRWNSTYLMLEAA

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like5.9e-4172.17Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GIE+V+TLTVDN SSNDTA+AYL+KRF  GL+  GEFLHVRCCAHILNLIV D  K+ ++ + RIR  VRF+RSSPARF KFKKCIE E I+  S +CLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPTRWNSTY+MLEAA
Subjt:  VPTRWNSTYLMLEAA

A0A5D3DZY7 Putative transposase5.9e-4172.17Show/hide
Query:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD
        GIE+V+TLTVDN SSNDTA+AYL+KRF  GL+  GEFLHVRCCAHILNLIV D  K+ ++ + RIR  VRF+RSSPARF KFKKCIE E I+  S +CLD
Subjt:  GIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLD

Query:  VPTRWNSTYLMLEAA
        VPTRWNSTY+MLEAA
Subjt:  VPTRWNSTYLMLEAA

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.3e-1639.67Show/hide
Query:  EKVLTLTVDN-VSSNDTAIAYLVKRF--KHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL
        +K+ T+T+DN  SS+D   A L      K+ L+L G+   VRC AHILN +  D +  +H  +  IR  ++F+++SP+   KF +   +  I S   LCL
Subjt:  EKVLTLTVDN-VSSNDTAIAYLVKRF--KHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL

Query:  DVPTRWNSTYLMLEAAKNLRR
        DV T+WN+TYLML AA + ++
Subjt:  DVPTRWNSTYLMLEAAKNLRR

P03010 Putative AC9 transposase2.7e-1938.71Show/hide
Query:  EKVLTLTVDNVSSNDTAIAYLVKRFK---HGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL
        +K+  L++DN S+N+ A+  +++  +     LV DG F HVRC  HILNL+  DGL  +  ++ +I+ +V  V+SSP ++ +  KC  E ++  +  +  
Subjt:  EKVLTLTVDNVSSNDTAIAYLVKRFK---HGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL

Query:  DVPTRWNSTYLMLEAAKNLRRHLI
        DV TRWNSTYLML  A   +  LI
Subjt:  DVPTRWNSTYLMLEAAKNLRRHLI

P08770 Putative AC transposase2.7e-1938.71Show/hide
Query:  EKVLTLTVDNVSSNDTAIAYLVKRFK---HGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL
        +K+  L++DN S+N+ A+  +++  +     LV DG F HVRC  HILNL+  DGL  +  ++ +I+ +V  V+SSP ++ +  KC  E ++  +  +  
Subjt:  EKVLTLTVDNVSSNDTAIAYLVKRFK---HGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL

Query:  DVPTRWNSTYLMLEAAKNLRRHLI
        DV TRWNSTYLML  A   +  LI
Subjt:  DVPTRWNSTYLMLEAAKNLRRHLI

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.5e-1740.5Show/hide
Query:  EKVLTLTVDN-VSSNDTAIAYLVKRF--KHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL
        +K+ T+T+DN  SS+D   A L      K+ L+L G+   VRC AHILN +  D +  +H  +  IR  ++F+++SP+R  KF +   +  I S   LCL
Subjt:  EKVLTLTVDN-VSSNDTAIAYLVKRF--KHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCL

Query:  DVPTRWNSTYLMLEAAKNLRR
        DV T+WN+TYLML AA + ++
Subjt:  DVPTRWNSTYLMLEAAKNLRR

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 31.8e-1538.46Show/hide
Query:  EKVLTLTVDN-VSSNDTAIAYLVKRF---KHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLC
        +K+ T+T+DN  SS+D   A ++      K  +++ G+   VRC AHILN +  D +  VH  +  IR  ++F+++S     KF +   +  I S   LC
Subjt:  EKVLTLTVDN-VSSNDTAIAYLVKRF---KHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLC

Query:  LDVPTRWNSTYLMLEAA
        LDV T+WN+TYLML AA
Subjt:  LDVPTRWNSTYLMLEAA

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain4.5e-0929.51Show/hide
Query:  GIE-KVLTLTVDNVSSNDTAIAYLVKR--FKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLL
        G+E K+  +T ++ +SN +A+  +  +   K+  +LDG+ +   C A     +  D L+   + +  IR+ V+ V++S +   +F +  E+  + S  +L
Subjt:  GIE-KVLTLTVDNVSSNDTAIAYLVKR--FKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLL

Query:  CLDVPTRWNSTYLMLEAAKNLR
         LD  T+WN+TY+ML AA  L+
Subjt:  CLDVPTRWNSTYLMLEAAKNLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAACATTGGGAATTGAAAAGGTGTTGACGTTGACTGTTGATAATGTTTCATCCAATGATACTGCTATTGCTTATCTAGTTAAGCGTTTTAAACATGGATTGGT
GTTGGATGGTGAGTTTTTGCATGTTAGATGTTGTGCACATATTCTTAATTTGATTGTTAATGATGGCTTGAAAGATGTGCATGAATCAGTGTCTCGAATTCGAAATGTTG
TTAGATTTGTTAGATCTTCTCCAGCTCGATTTGCAAAATTTAAGAAATGTATTGAAGAAGAGAATATATCTAGCAATAGTCTTCTATGTCTTGATGTTCCAACAAGGTGG
AACTCCACATATTTGATGCTTGAGGCTGCTAAAAATTTGAGAAGGCATTTGATAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAAACATTGGGAATTGAAAAGGTGTTGACGTTGACTGTTGATAATGTTTCATCCAATGATACTGCTATTGCTTATCTAGTTAAGCGTTTTAAACATGGATTGGT
GTTGGATGGTGAGTTTTTGCATGTTAGATGTTGTGCACATATTCTTAATTTGATTGTTAATGATGGCTTGAAAGATGTGCATGAATCAGTGTCTCGAATTCGAAATGTTG
TTAGATTTGTTAGATCTTCTCCAGCTCGATTTGCAAAATTTAAGAAATGTATTGAAGAAGAGAATATATCTAGCAATAGTCTTCTATGTCTTGATGTTCCAACAAGGTGG
AACTCCACATATTTGATGCTTGAGGCTGCTAAAAATTTGAGAAGGCATTTGATAGATTAG
Protein sequenceShow/hide protein sequence
MFETLGIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLDVPTRW
NSTYLMLEAAKNLRRHLID