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Lag0039462 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039462
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:44169726..44170255
RNA-Seq ExpressionLag0039462
SyntenyLag0039462
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]2.5e-0737.62Show/hide
Query:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL
        KS NEA  IL+TIA+NN  W  T   T  K  A V+E +A + + A++ ++ +++  +++ N  N+ PA  I S    C  CGE H+ + CP NP  VC 
Subjt:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL

Query:  L
        +
Subjt:  L

XP_030477908.1 uncharacterized protein LOC115694945 [Cannabis sativa]1.2e-0636.63Show/hide
Query:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL
        KS NEA  IL+TIA+NN  W  T   T  K  A V+E +A + + A++ ++ +++  +++ N   + PA  I S    C  CGE H+ + CP NP  VC 
Subjt:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL

Query:  L
        +
Subjt:  L

XP_030478229.1 uncharacterized protein LOC115695294 [Cannabis sativa]3.6e-0635.64Show/hide
Query:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL
        KS NEA  IL+TIA+NN  W  T   T  K  A V+E +A + + A++ ++ +++  +++    N+ PA  I +    C  CGE H+ + CP NP  VC 
Subjt:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL

Query:  L
        +
Subjt:  L

XP_030483354.1 uncharacterized protein LOC115699947 [Cannabis sativa]7.3e-0737.62Show/hide
Query:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL
        KS NEA  IL+TIA+NN  W  T   T  K  A V+E +A + + A++ ++ +++  +++ N  N+ PA  I S    C  CGE H  + CP NP  VC 
Subjt:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL

Query:  L
        +
Subjt:  L

XP_030505151.1 uncharacterized protein LOC115720131 [Cannabis sativa]1.0e-0840.59Show/hide
Query:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL
        KS N+A  IL+TIA+NN  W  T   T  K  A VVE +A +T+ A++ ++ +++  M++ N  N+ PA VI S    C  CG+ H+ +NCP NP  VC 
Subjt:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL

Query:  L
        +
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A1S4AV27 uncharacterized protein LOC1078017251.6e-0434.78Show/hide
Query:  NEAHAILDTIATNNRHW-GETEPTTVLKNPA-KVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSPCCEICGEEHIVDNCPLNP
        +E   +L+    N+ +W G+ EP  VLK  A  ++E +  S M A+I ++ + M  MTM+    +     +S+ CCE+C E H  D CP+NP
Subjt:  NEAHAILDTIATNNRHW-GETEPTTVLKNPA-KVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSPCCEICGEEHIVDNCPLNP

A0A6J1DSZ5 uncharacterized protein LOC1110241072.8e-0432.74Show/hide
Query:  NGGRIPPFPQKSANEAHAILDTIATNNRHWGETEPTTVLK--NPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQA--------NLAPANVISSPCCEIC
        NG     F  KS NE   ILD ++ +N  W      T  K  +PA V+  +  ++M  +I  I  M+  M  NN A        N +P   I+   C  C
Subjt:  NGGRIPPFPQKSANEAHAILDTIATNNRHWGETEPTTVLK--NPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQA--------NLAPANVISSPCCEIC

Query:  GEEHIVDNCPLNP
        G++H  +NCP NP
Subjt:  GEEHIVDNCPLNP

A0A6J1DZC3 uncharacterized protein LOC1110244494.3e-0534.23Show/hide
Query:  FPQKSANEAHAILDTIATNNRHW----GETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQA--------NLAPANVISSPCCEICGEEHI
        F  K+ NE   ILD +  +N  W      T+P T+  + A V   +A S+M +++  +  MM  M  NN A        NLAP   +    C  CG+ H 
Subjt:  FPQKSANEAHAILDTIATNNRHW----GETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQA--------NLAPANVISSPCCEICGEEHI

Query:  VDNCPLNPVCL
         +NCP NP CL
Subjt:  VDNCPLNPVCL

A0A6J1H7E4 uncharacterized protein LOC1114611681.6e-0432.41Show/hide
Query:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAK----VVETEANSTMLAEIKAIHSMMMGMTMNNQANL-APANV------ISSPCCEICGEEHIVDNC
        K+ NEA+ IL+ IA+NN  W +     V  NP K    V+E +A S++ A++ ++ +++  +       + APA+        ++  C  CGEEH  D C
Subjt:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAK----VVETEANSTMLAEIKAIHSMMMGMTMNNQANL-APANV------ISSPCCEICGEEHIVDNC

Query:  PLNPVCLL
        P NP  +L
Subjt:  PLNPVCLL

U5CUI2 Retrotrans_gag domain-containing protein1.2e-0737.62Show/hide
Query:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL
        KS NEA  IL+TIA+NN  W  T   T  K  A V+E +A + + A++ ++ +++  +++ N  N+ PA  I S    C  CGE H+ + CP NP  VC 
Subjt:  KSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSP--CCEICGEEHIVDNCPLNP--VCL

Query:  L
        +
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAGTTTCCAATGGAACCTCTTGGAGTCGATCCTCAAGTTGATCCACAGAATCGTGGAAGAGAGCAAAATGGTGGGAGAATTCCTCCTTTTCCTCAAAAGTCTGC
AAATGAGGCACATGCTATCTTGGACACCATAGCCACAAACAATAGACATTGGGGAGAAACCGAGCCAACAACAGTTTTGAAAAATCCAGCTAAAGTAGTGGAAACAGAGG
CTAATTCTACTATGCTAGCGGAGATCAAGGCTATCCACAGCATGATGATGGGCATGACCATGAACAATCAAGCCAATCTAGCCCCTGCCAATGTTATTTCTTCTCCCTGT
TGTGAAATTTGTGGTGAGGAACACATTGTTGATAACTGTCCACTAAATCCCGTCTGTCTTTTATGTAGGTCAACAGGAGAACCAGAACCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAGTTTCCAATGGAACCTCTTGGAGTCGATCCTCAAGTTGATCCACAGAATCGTGGAAGAGAGCAAAATGGTGGGAGAATTCCTCCTTTTCCTCAAAAGTCTGC
AAATGAGGCACATGCTATCTTGGACACCATAGCCACAAACAATAGACATTGGGGAGAAACCGAGCCAACAACAGTTTTGAAAAATCCAGCTAAAGTAGTGGAAACAGAGG
CTAATTCTACTATGCTAGCGGAGATCAAGGCTATCCACAGCATGATGATGGGCATGACCATGAACAATCAAGCCAATCTAGCCCCTGCCAATGTTATTTCTTCTCCCTGT
TGTGAAATTTGTGGTGAGGAACACATTGTTGATAACTGTCCACTAAATCCCGTCTGTCTTTTATGTAGGTCAACAGGAGAACCAGAACCAGAATAG
Protein sequenceShow/hide protein sequence
MQEFPMEPLGVDPQVDPQNRGREQNGGRIPPFPQKSANEAHAILDTIATNNRHWGETEPTTVLKNPAKVVETEANSTMLAEIKAIHSMMMGMTMNNQANLAPANVISSPC
CEICGEEHIVDNCPLNPVCLLCRSTGEPEPE