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Lag0039467 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039467
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr2:44357960..44358349
RNA-Seq ExpressionLag0039467
SyntenyLag0039467
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4378452.1 hypothetical protein F8388_021646 [Cannabis sativa]1.4e-1243.02Show/hide
Query:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTN
        +Q+  SSST +H  W K WKL++P+K++ FVWK FH+++P    L   H++    CPLC    ET  HALF   RA+E+W++   N
Subjt:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTN

KQJ89430.1 hypothetical protein BRADI_4g25636v3 [Brachypodium distachyon]8.2e-1344.94Show/hide
Query:  STSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLD
        S++++ +W  LWKL+IP KVK FVW++ H  +P  V L N H+ V   CPLC  G E  +H LF+  RA EIW LL     KF+ + L+
Subjt:  STSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLD

XP_023915763.1 uncharacterized protein LOC112027315 [Quercus suber]1.2e-1132.52Show/hide
Query:  ASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIW------KLLFTNGSKFLLDQLDV
        +SSS  +DH  W K+WK+K+PNK++HF+W++    +PT VNL   HV V   C  C +  E+T+H+L+   +A+ +W      + L   G +  ++ L+ 
Subjt:  ASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIW------KLLFTNGSKFLLDQLDV

Query:  KDKMGQIRHGRRCGSVSYLCRCM
          K G    G +    +  C C+
Subjt:  KDKMGQIRHGRRCGSVSYLCRCM

XP_030494705.1 uncharacterized protein LOC115710484 [Cannabis sativa]1.5e-1136.51Show/hide
Query:  ASSSSTSDHGS--WGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWK----LLFTNGSKFLLDQLDV
        A SSS  D     W  LW L +P K+KHF+W+++HH++PT  NL + ++     C  C    +T +HAL    RAR+IWK    + F N  +F     D+
Subjt:  ASSSSTSDHGS--WGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWK----LLFTNGSKFLLDQLDV

Query:  KDKMGQIRHGRRCGSVSYLCRCMGAL
        KD    I  G    S   LC C   L
Subjt:  KDKMGQIRHGRRCGSVSYLCRCMGAL

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]1.4e-1245.12Show/hide
Query:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKL
        +Q+  SS+T +H  W K WKL++P+K++ FVWK FH+V+P    L   H++    CPLC    ET  HALF   RA+E+WK+
Subjt:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKL

TrEMBL top hitse value%identityAlignment
A0A0Q3EPM2 Uncharacterized protein4.0e-1344.94Show/hide
Query:  STSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLD
        S++++ +W  LWKL+IP KVK FVW++ H  +P  V L N H+ V   CPLC  G E  +H LF+  RA EIW LL     KF+ + L+
Subjt:  STSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLD

A0A453ET30 zf-RVT domain-containing protein3.3e-1240.45Show/hide
Query:  WGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLDVKDKMGQ
        W K+WKL  P KVK  +W++ H  +P  V L N H  V   CP C EG E T H LF+  +A+E+WK+L   G   ++D+    D+ G+
Subjt:  WGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLDVKDKMGQ

A0A7J6G6P2 Peptidase A1 domain-containing protein6.7e-1343.02Show/hide
Query:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTN
        +Q+  SSST +H  W K WKL++P+K++ FVWK FH+++P    L   H++    CPLC    ET  HALF   RA+E+W++   N
Subjt:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTN

A0A803PF68 Uncharacterized protein6.7e-1345.12Show/hide
Query:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKL
        +Q+  SS+T +H  W K WKL++P+K++ FVWK FH+V+P    L   H++    CPLC    ET  HALF   RA+E+WK+
Subjt:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKL

A0A803PH33 Uncharacterized protein1.5e-1243.9Show/hide
Query:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKL
        +Q+  SS+T +H  W K WKL++P+K++ FVWK FH+V+P    L   H++    CPLC    ET  HALF   RA+E+W++
Subjt:  RQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.5e-0426.56Show/hide
Query:  LWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWK
        +WKL +  K+KHF+W+     + T   L + ++     C  C    ET  H +F     + +W+
Subjt:  LWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWK

AT3G09510.1 Ribonuclease H-like superfamily protein1.6e-0630.12Show/hide
Query:  KLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLDVKD
        ++W L I  K+KHF+W++    + T   L    + +   CP C    E+  HALF    A   W+L   + S  + +QL   D
Subjt:  KLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLDVKD

AT3G25270.1 Ribonuclease H-like superfamily protein1.1e-0735.38Show/hide
Query:  KLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWK
        K+WKLK   K+KHF+WK     + T  NL   H+     C  C +  ET+ H  F    A+++W+
Subjt:  KLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWK

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.9e-0433.93Show/hide
Query:  GKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALF
        G +W LKI  K+K  +WK+ ++ +P    L++ ++S+   C  C +  ET  H LF
Subjt:  GKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGATGCTTCGTCAAGAAGCATCTTCTTCCTCTACTAGTGACCATGGGTCGTGGGGGAAACTGTGGAAACTGAAGATTCCAAACAAAGTTAAACACTTTGTGTG
GAAGTCTTTCCATCATGTCATACCAACTATGGTTAATCTTGTTAATCACCATGTTTCGGTGGGTTATGGGTGTCCTTTATGTTTCGAGGGCCCAGAGACTACTGTTCATG
CCTTATTCCAACGTGTTCGTGCTCGGGAGATTTGGAAACTTTTGTTTACCAATGGCAGTAAGTTCCTTCTCGATCAGTTGGATGTAAAGGATAAAATGGGTCAGATTAGG
CATGGAAGGCGATGCGGCTCTGTCTCTTATTTGTGTCGGTGCATGGGCGCTTTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGATGCTTCGTCAAGAAGCATCTTCTTCCTCTACTAGTGACCATGGGTCGTGGGGGAAACTGTGGAAACTGAAGATTCCAAACAAAGTTAAACACTTTGTGTG
GAAGTCTTTCCATCATGTCATACCAACTATGGTTAATCTTGTTAATCACCATGTTTCGGTGGGTTATGGGTGTCCTTTATGTTTCGAGGGCCCAGAGACTACTGTTCATG
CCTTATTCCAACGTGTTCGTGCTCGGGAGATTTGGAAACTTTTGTTTACCAATGGCAGTAAGTTCCTTCTCGATCAGTTGGATGTAAAGGATAAAATGGGTCAGATTAGG
CATGGAAGGCGATGCGGCTCTGTCTCTTATTTGTGTCGGTGCATGGGCGCTTTGGAATGA
Protein sequenceShow/hide protein sequence
MGMMLRQEASSSSTSDHGSWGKLWKLKIPNKVKHFVWKSFHHVIPTMVNLVNHHVSVGYGCPLCFEGPETTVHALFQRVRAREIWKLLFTNGSKFLLDQLDVKDKMGQIR
HGRRCGSVSYLCRCMGALE