; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039480 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039480
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr2:44648641..44649588
RNA-Seq ExpressionLag0039480
SyntenyLag0039480
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]1.1e-6651.15Show/hide
Query:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR
        +FH DH H T++C  L+ E++ LI+ GYLKE+V + +  +  + D      +P  EIRTI+GGP   E GRKRKA++RE +       +Y   + K   +
Subjt:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        +EF+E EAT + HPHND LVI L IANAKVHRILVD GSSAD++S+TA+ AM LG    K S   LV F GE+V P G  EL VTFG G  +IT +++FL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR
        V+D   +YNAILGRPT+H LKA+ STYHQ + FPT  GIG +  EQ++SRECY+ ++K  DR
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]2.9e-6450.38Show/hide
Query:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR
        +FH DHGH T++C  L++E+E LIR GYLKE+V     + P     G+   +P  EI+TI+GGP   ESGRK K  VREA+       +Y  ++   S  
Subjt:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        +EF++ EAT + HPHNDALVI L IAN KVHRILVD G+SAD++S TA+  M +G + LK + TPLV          G +E PVTFG G  ++T+M+ FL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR
        VVD   +YNAILGR T+H LKA+ STYHQ +KFPT  G+G + GEQ++SRECY+ ++K  DR
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]1.7e-6749.63Show/hide
Query:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR
        +FH DHGH T++C  L++E+E LIR GYLKE+V + +     + D      +P  EI+TI GGP+  E G+KRKA+++EA+  P    +Y         +
Subjt:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        ++F+E E T + HPHNDALVI L I N KVHRILVD GSS  ++S+TA+ AM LG + LK +L PLVGFGGE+V  +  ++LPVTFG G   IT+++ FL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDRRIQTTPPR
        VVD   +YNAILGRPT+H LKA+ STYH+ LKFPT+ GI  V GEQ++S ECY+ +L+  D   + +  R
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDRRIQTTPPR

XP_023902012.1 uncharacterized protein LOC112013864 [Quercus suber]1.5e-6046.81Show/hide
Query:  FHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQH-EPDGQGMYSLHLDKNSPR
        FH DHGH T EC  L+ +IE LIR+G LK F+G D     L+A   +    P  EIR ILGG S G+S + +KA ++  Q  +  G+   +  +D+ +  
Subjt:  FHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQH-EPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        + FT+ +A  V HPH+DA+VI L IA+ K  R+L+D GSSAD+L   AF  MRLG + L+P+ +PLVGFGG KV P GS+ LPVT G     +T  ++FL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMAL--------KNIDRRIQTTPPRDMAE
        VVDC  +YNAI+GRPTL+  KAV STYH  +KFPTE G+G V G+Q  +RECY   L         NI+ R  T  P +  E
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMAL--------KNIDRRIQTTPPRDMAE

XP_030923408.1 uncharacterized protein LOC115950338 [Quercus lobata]1.5e-6046.99Show/hide
Query:  FHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQH-EPDGQGMYSLHLDKNSPR
        FH DHGH T EC  L+ +IE LIR+G LK FVG DR    L+    +    P  EIR I+GG   G+S + +K  ++  Q+ +  G+   +  +D+  P 
Subjt:  FHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQH-EPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        + FT+ +A  + HPH+DA+VI L IA+    R+LVD GSSAD+L   AF  MRLG + L+P  +PL+GFGG KV P G++ LPV  G     IT+ +NFL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDRRIQT
        VVDC  +YNAI+GRPTL+  KA+ STYH  +KFPTE GIG   G+Q  +RECY +A+  +D ++QT
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDRRIQT

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.0e-5857.35Show/hide
Query:  GPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPRLEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPS
        GP   ESGRKRKA VREA+       +Y  ++   S ++EF+EGEAT V HPHNDALVI L IANAKVHRILVD GSS D+ S+TA+ AM LG E LK S
Subjt:  GPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPRLEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPS

Query:  LTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFLVVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR
        LTPL+GFGGE++ P+G +ELP+TF     +ITRM++FLVVD   +YN IL RPT+H L+A+ STYHQ +KFPT  G+G + GEQ++SRECY+ +++  D+
Subjt:  LTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFLVVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR

Query:  RIQT
           T
Subjt:  RIQT

A0A6J1D8C9 uncharacterized protein LOC1110183005.2e-6751.15Show/hide
Query:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR
        +FH DH H T++C  L+ E++ LI+ GYLKE+V + +  +  + D      +P  EIRTI+GGP   E GRKRKA++RE +       +Y   + K   +
Subjt:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        +EF+E EAT + HPHND LVI L IANAKVHRILVD GSSAD++S+TA+ AM LG    K S   LV F GE+V P G  EL VTFG G  +IT +++FL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR
        V+D   +YNAILGRPT+H LKA+ STYHQ + FPT  GIG +  EQ++SRECY+ ++K  DR
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR

A0A6J1DP33 uncharacterized protein LOC1110228866.2e-6048.29Show/hide
Query:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPL-EIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSP
        +FH DHGH T++C  L++E+E LIR GYLKE+V     + P     G+  +N P+ EIRTI                                 +++   
Subjt:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPL-EIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSP

Query:  RLEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINF
        +LEF+E EAT + HPHNDALVI L IANAKVHRILVD GSS  ++S+TA+ AM LG + LK S  PLVGFGGE+V P G +ELPV FG G  +I +M++F
Subjt:  RLEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINF

Query:  LVVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR
        LVV    +YN ILGRP +H LK + STYHQ +KFPT  GIG + GEQ++ RECY  ++K  DR
Subjt:  LVVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR

A0A6J1DQL9 uncharacterized protein LOC1110229051.4e-6450.38Show/hide
Query:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR
        +FH DHGH T++C  L++E+E LIR GYLKE+V     + P     G+   +P  EI+TI+GGP   ESGRK K  VREA+       +Y  ++   S  
Subjt:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        +EF++ EAT + HPHNDALVI L IAN KVHRILVD G+SAD++S TA+  M +G + LK + TPLV          G +E PVTFG G  ++T+M+ FL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR
        VVD   +YNAILGR T+H LKA+ STYHQ +KFPT  G+G + GEQ++SRECY+ ++K  DR
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDR

A0A6J1DV51 uncharacterized protein LOC1110246628.0e-6849.63Show/hide
Query:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR
        +FH DHGH T++C  L++E+E LIR GYLKE+V + +     + D      +P  EI+TI GGP+  E G+KRKA+++EA+  P    +Y         +
Subjt:  MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPR

Query:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL
        ++F+E E T + HPHNDALVI L I N KVHRILVD GSS  ++S+TA+ AM LG + LK +L PLVGFGGE+V  +  ++LPVTFG G   IT+++ FL
Subjt:  LEFTEGEATGVRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFL

Query:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDRRIQTTPPR
        VVD   +YNAILGRPT+H LKA+ STYH+ LKFPT+ GI  V GEQ++S ECY+ +L+  D   + +  R
Subjt:  VVDCIPAYNAILGRPTLHGLKAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDRRIQTTPPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCATGGAGATCACGGCCATACAACCCGAGAGTGCATCCAGTTGCGAGATGAGATAGAAACCCTGATCAGAGAAGGTTACCTCAAGGAGTTCGTGGGAAACGATAG
AGGCAAAAGGCCGCTACAAGCAGACCAAGGCAAGGGTGGTGCCAACCCACCACTGGAGATTCGAACCATTTTAGGGGGACCCTCAGGAGGGGAGTCAGGTAGGAAACGAA
AGGCTGCCGTTCGGGAGGCGCAACACGAGCCCGATGGGCAAGGTATGTACTCACTCCATCTTGATAAAAACTCACCCAGGTTGGAGTTTACAGAGGGGGAGGCCACAGGA
GTGCGTCACCCGCACAATGATGCACTAGTAATTGCTCTGACGATAGCCAACGCAAAGGTTCACCGGATTCTCGTTGATAGAGGAAGTTCCGCTGACGTACTCTCGGTTAC
TGCGTTTGACGCCATGAGGCTGGGGAATGAACACCTGAAGCCGAGTCTTACGCCTCTGGTGGGCTTCGGCGGAGAAAAAGTCAGCCCGAGAGGGAGCGTAGAGTTACCGG
TAACGTTTGGAGAGGGATTGCATGCCATAACGAGGATGATCAACTTCTTGGTGGTTGATTGCATCCCGGCATATAACGCCATCTTGGGACGACCCACCCTGCACGGGCTC
AAGGCTGTAGCTTCAACCTACCACCAAGTCTTGAAGTTTCCAACAGAGAAAGGCATTGGAGCAGTGTATGGCGAGCAGAAGATGTCTAGAGAATGCTACTTTATGGCCCT
CAAAAATATTGACAGAAGGATTCAGACAACACCGCCTCGGGATATGGCCGAGGCCGAGCACATGAAGAGGCTAGTTTTCCCCTCCCAATGGAGCTCTAGTTTAGTATTTA
CTATGTTTTCAGTCCTCCGGGATCGCTTTCAGTTTTCGTTATTCTTTGTAATCAATTTGTTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCATGGAGATCACGGCCATACAACCCGAGAGTGCATCCAGTTGCGAGATGAGATAGAAACCCTGATCAGAGAAGGTTACCTCAAGGAGTTCGTGGGAAACGATAG
AGGCAAAAGGCCGCTACAAGCAGACCAAGGCAAGGGTGGTGCCAACCCACCACTGGAGATTCGAACCATTTTAGGGGGACCCTCAGGAGGGGAGTCAGGTAGGAAACGAA
AGGCTGCCGTTCGGGAGGCGCAACACGAGCCCGATGGGCAAGGTATGTACTCACTCCATCTTGATAAAAACTCACCCAGGTTGGAGTTTACAGAGGGGGAGGCCACAGGA
GTGCGTCACCCGCACAATGATGCACTAGTAATTGCTCTGACGATAGCCAACGCAAAGGTTCACCGGATTCTCGTTGATAGAGGAAGTTCCGCTGACGTACTCTCGGTTAC
TGCGTTTGACGCCATGAGGCTGGGGAATGAACACCTGAAGCCGAGTCTTACGCCTCTGGTGGGCTTCGGCGGAGAAAAAGTCAGCCCGAGAGGGAGCGTAGAGTTACCGG
TAACGTTTGGAGAGGGATTGCATGCCATAACGAGGATGATCAACTTCTTGGTGGTTGATTGCATCCCGGCATATAACGCCATCTTGGGACGACCCACCCTGCACGGGCTC
AAGGCTGTAGCTTCAACCTACCACCAAGTCTTGAAGTTTCCAACAGAGAAAGGCATTGGAGCAGTGTATGGCGAGCAGAAGATGTCTAGAGAATGCTACTTTATGGCCCT
CAAAAATATTGACAGAAGGATTCAGACAACACCGCCTCGGGATATGGCCGAGGCCGAGCACATGAAGAGGCTAGTTTTCCCCTCCCAATGGAGCTCTAGTTTAGTATTTA
CTATGTTTTCAGTCCTCCGGGATCGCTTTCAGTTTTCGTTATTCTTTGTAATCAATTTGTTGATCTGA
Protein sequenceShow/hide protein sequence
MFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGNDRGKRPLQADQGKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQHEPDGQGMYSLHLDKNSPRLEFTEGEATG
VRHPHNDALVIALTIANAKVHRILVDRGSSADVLSVTAFDAMRLGNEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLHAITRMINFLVVDCIPAYNAILGRPTLHGL
KAVASTYHQVLKFPTEKGIGAVYGEQKMSRECYFMALKNIDRRIQTTPPRDMAEAEHMKRLVFPSQWSSSLVFTMFSVLRDRFQFSLFFVINLLI