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Lag0039522 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039522
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:45701315..45705282
RNA-Seq ExpressionLag0039522
SyntenyLag0039522
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNY18108.1 ribonuclease H, partial [Trifolium pratense]4.3e-0952.24Show/hide
Query:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVR-GEKNRTEP
        P GL   M+    RFWWGS+   RKIHW SWK++C  K+QGGMG RDL+ FN+ +L + G +  TEP
Subjt:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVR-GEKNRTEP
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]3.9e-1040.21Show/hide
Query:  RFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLL
        RFWWGS++  +KIHW SWK++C+SK QGG+G +DL +FNQ M                                       LAKQSW+IIK  NSLL
Subjt:  RFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLL
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]5.1e-1036.94Show/hide
Query:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW
        P+ +   +     RFWWGSS   RKIHW+SWK +CI K  GGMG RD+++FNQ M                                       LAKQSW
Subjt:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW

Query:  RIIKLTNSLLA
        RI++  +SLLA
Subjt:  RIIKLTNSLLA
XP_023923421.1 uncharacterized protein LOC112034833 [Quercus suber]7.3e-0948.28Show/hide
Query:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVR
        P+GL   ++    +FWWG     RKIHW+SW+ +C+SK +GGMG +DL  FN+TML +
Subjt:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVR
XP_030479177.1 uncharacterized protein LOC115696415 [Cannabis sativa]5.6e-0932.84Show/hide
Query:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW
        P+ +   ++ A  RFWWGSS   RK+HW+SWK +C SK +GG+G R L  FNQ M                                       LAKQ+W
Subjt:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW

Query:  RIIKLTNSLLALAKGLRRGAADFVPKRMKMESPP
        RI +  NSLL+L    R     + P+   +E+ P
Subjt:  RIIKLTNSLLALAKGLRRGAADFVPKRMKMESPP
TrEMBL top hitse value%identityAlignment
A0A2K3PS48 Ribonuclease H (Fragment)2.1e-0952.24Show/hide
Query:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVR-GEKNRTEP
        P GL   M+    RFWWGS+   RKIHW SWK++C  K+QGGMG RDL+ FN+ +L + G +  TEP
Subjt:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVR-GEKNRTEP
A0A6J1CV63 uncharacterized protein LOC1110146621.9e-1040.21Show/hide
Query:  RFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLL
        RFWWGS++  +KIHW SWK++C+SK QGG+G +DL +FNQ M                                       LAKQSW+IIK  NSLL
Subjt:  RFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLL
A0A6J1DRA0 uncharacterized protein LOC1110224232.5e-1036.94Show/hide
Query:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW
        P+ +   +     RFWWGSS   RKIHW+SWK +CI K  GGMG RD+++FNQ M                                       LAKQSW
Subjt:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW

Query:  RIIKLTNSLLA
        RI++  +SLLA
Subjt:  RIIKLTNSLLA
A0A803PL44 Uncharacterized protein5.5e-1034.33Show/hide
Query:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW
        PI +   ++ A  RFWWGS+   RKIHW+SWK +C SK +GG+G R L  FNQ M                                       LAKQ+W
Subjt:  PIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSW

Query:  RIIKLTNSLLALAKGLRRGAADFVPKRMKMESPP
        RI+K  NSLL+L    R     + P+   +E+ P
Subjt:  RIIKLTNSLLALAKGLRRGAADFVPKRMKMESPP
A0A803PR33 Uncharacterized protein1.3e-1142Show/hide
Query:  RFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGE----KNRTEPINRTGLSR-FGRVDFYGNPTPPDPF-SPLVLAKQSWRIIKLTN
        RFWWGSS    KIHW+SWK +C SK  GG+G R L  FNQ ML +      KN +  +     +R F R++F+ +  PP PF S  +    +W + KLT+
Subjt:  RFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGE----KNRTEPINRTGLSR-FGRVDFYGNPTPPDPF-SPLVLAKQSWRIIKLTN
SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003109.3e-0733.05Show/hide
Query:  FWWGSSEPGRKIHWRSWKQMCISKR-QGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLLALA
        FWW S E  RKI W +W+++C SK   GG+G RDL  FNQ +L + +  R      T LSR  R  ++ + +  +  S       +WR I     L  L+
Subjt:  FWWGSSEPGRKIHWRSWKQMCISKR-QGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLLALA

Query:  KGLRRGAADFVPKRMKME
        +GL R   D +  ++ ++
Subjt:  KGLRRGAADFVPKRMKME
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.1e-0533.33Show/hide
Query:  FWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTML
        FWW + +  + +HW++W  +   K +GG+G +D+  FN  +L
Subjt:  FWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTML
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.6e-0833.05Show/hide
Query:  FWWGSSEPGRKIHWRSWKQMCISKR-QGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLLALA
        FWW S E  RKI W +W+++C SK   GG+G RDL  FNQ +L + +  R      T LSR  R  ++ + +  +  S       +WR I     L  L+
Subjt:  FWWGSSEPGRKIHWRSWKQMCISKR-QGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSRFGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLLALA

Query:  KGLRRGAADFVPKRMKME
        +GL R   D +  ++ ++
Subjt:  KGLRRGAADFVPKRMKME

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGAAGATTGAAGAGCCGGAGAGCGACGGCGGCCGTGGCAGTGTTGAATGTTGAAGCAAGAAACAGAGGGAACAGCCGTGAAAAGAGAGGAGGGGAGCC
AATTGGGCTGGGCTATGCGATGGATTGGGCTGGCGAAAGATTTTGGTGGGGTTCTTCTGAGCCGGGTCGAAAGATTCATTGGCGCAGTTGGAAACAAATGTGTATCAGCA
AAAGGCAAGGTGGAATGGGCGTTAGAGACTTAACGGTGTTCAACCAGACCATGCTAGTTAGGGGTGAGAAAAATCGAACTGAACCGATAAACCGAACCGGACTGAGTCGA
TTCGGTCGGGTCGATTTTTATGGAAACCCGACCCCACCTGACCCGTTTTCACCCCTAGTGCTAGCAAAGCAGAGTTGGCGAATCATCAAATTAACAAACAGTTTGCTTGC
TCTCGCTAAGGGTTTGCGACGCGGAGCGGCCGACTTTGTTCCCAAGAGGATGAAAATGGAGTCGCCACCAGTCTTAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGGAAGAAGATTGAAGAGCCGGAGAGCGACGGCGGCCGTGGCAGTGTTGAATGTTGAAGCAAGAAACAGAGGGAACAGCCGTGAAAAGAGAGGAGGGGAGCC
AATTGGGCTGGGCTATGCGATGGATTGGGCTGGCGAAAGATTTTGGTGGGGTTCTTCTGAGCCGGGTCGAAAGATTCATTGGCGCAGTTGGAAACAAATGTGTATCAGCA
AAAGGCAAGGTGGAATGGGCGTTAGAGACTTAACGGTGTTCAACCAGACCATGCTAGTTAGGGGTGAGAAAAATCGAACTGAACCGATAAACCGAACCGGACTGAGTCGA
TTCGGTCGGGTCGATTTTTATGGAAACCCGACCCCACCTGACCCGTTTTCACCCCTAGTGCTAGCAAAGCAGAGTTGGCGAATCATCAAATTAACAAACAGTTTGCTTGC
TCTCGCTAAGGGTTTGCGACGCGGAGCGGCCGACTTTGTTCCCAAGAGGATGAAAATGGAGTCGCCACCAGTCTTAATTTAG
Protein sequenceShow/hide protein sequence
MERGRRLKSRRATAAVAVLNVEARNRGNSREKRGGEPIGLGYAMDWAGERFWWGSSEPGRKIHWRSWKQMCISKRQGGMGVRDLTVFNQTMLVRGEKNRTEPINRTGLSR
FGRVDFYGNPTPPDPFSPLVLAKQSWRIIKLTNSLLALAKGLRRGAADFVPKRMKMESPPVLI