; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039537 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039537
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:45873524..45874503
RNA-Seq ExpressionLag0039537
SyntenyLag0039537
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]8.2e-2333.94Show/hide
Query:  GASLELCLVGKVISSKRVNVEAF--------RTVMKVSV--------------ARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICN
        G  L  CLVGKV+ ++ VN E F        RTV +V +                 KK+VL+ G W FDRALL+L EPK    L    F+   FW+QI N
Subjt:  GASLELCLVGKVISSKRVNVEAF--------RTVMKVSV--------------ARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICN

Query:  VPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASV
        VP      ++ + LGG +G VEE                                  E E ++  PV+YERLPDFCY CG +GH  +EC          +
Subjt:  VPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASV

Query:  GDQYGEWMRAGMMGGEGARRR
           YG WM+A ++GG   + R
Subjt:  GDQYGEWMRAGMMGGEGARRR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.1e-3032.65Show/hide
Query:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVAR-----------------------GKKQVLSSGSWSF
        M+E+   W+    T +E + +        L+  +++LC+V K+ +SKR++ EA R+VMK SV R                        K +VLSSG W+F
Subjt:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVAR-----------------------GKKQVLSSGSWSF

Query:  DRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDE---------------------------------DEQEVWCPVL
        +++LL+L  P AT   + ++F+ C FW+QI N+P +  + +MA  LG K+G VEE E                                 D +++WCP+ 
Subjt:  DRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDE---------------------------------DEQEVWCPVL

Query:  YERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMM
        YE+LPDFCY CG +GH  REC   + V   +  +QYG+W+RA ++
Subjt:  YERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMM

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.3e-2333.33Show/hide
Query:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK----------------------VSVARGKKQVLSSGSWSFD
        M+++ K W++  L  EE D I        L+  +++LC VGK+  SKR+ VEAF +VMK                            K +V S G W+FD
Subjt:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK----------------------VSVARGKKQVLSSGSWSFD

Query:  RALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLY
        ++LLIL    A    + +D S C FWVQI  +  +  T  MA+ LG ++G VEE                                   D +++WCP+ Y
Subjt:  RALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLY

Query:  ERLPDFCYVCGCLGHVKRE
        ERLPDFCY CGC+GH  RE
Subjt:  ERLPDFCYVCGCLGHVKRE

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]4.8e-2330Show/hide
Query:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRT----------------------VMKVSVARGKKQVLSSGSWSFDR
        EELI++ +++ L GEEAD              ++  CLVGK++ ++ VN E  +T                      V K      KK+V + G W FDR
Subjt:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRT----------------------VMKVSVARGKKQVLSSGSWSFDR

Query:  ALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLYE
        AL++L+EPK    +    FS   FW++I NVP       + R LG ++G VE+                                  ED++++  PV+YE
Subjt:  ALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLYE

Query:  RLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRA
        RLPDFC+ CGC+GH  REC         ++   +G W++A
Subjt:  RLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRA

XP_024038344.1 uncharacterized protein LOC112097374 [Citrus clementina]6.9e-2229.62Show/hide
Query:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVM----------------------KVSVARGKKQVLSSGSWSFDR
        EELI++ K++ +  E+   +          G  L  CL+GK++ S+ VN E  +  +                      K +    K++VLS G+W FDR
Subjt:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVM----------------------KVSVARGKKQVLSSGSWSFDR

Query:  ALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLYE
        AL++L EPK    +   DFS   FWVQICN+P      +  + LGG +G VEE                                  E E ++  PV+YE
Subjt:  ALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLYE

Query:  RLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMMGGEG----ARRRYEGKG
        RLPDFC+ CG +G+  +ECT             +G WM+A M+GG      ++ R++ +G
Subjt:  RLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMMGGEG----ARRRYEGKG

TrEMBL top hitse value%identityAlignment
A0A5C7HK10 CCHC-type domain-containing protein2.4e-2028.1Show/hide
Query:  ELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRT----------------------VMKVSVARGKKQVLSSGSWSFDRA
        E+ K ++ +++  E++ +    E       A +++CLVGK+IS K+ N EAF+                       V   +    + ++ + G W FD +
Subjt:  ELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRT----------------------VMKVSVARGKKQVLSSGSWSFDRA

Query:  LLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMG--TVEEDEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGD
        L+ L++P+    +  + F+    W+QI +VP      + A+ +  ++G   ++ D+    V   + YERLP+FCYVCG +GH  ++C+ E   N A + D
Subjt:  LLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMG--TVEEDEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGD

Query:  --QYGEWMRA
          +YG WMRA
Subjt:  --QYGEWMRA

A0A5C7IDS9 CCHC-type domain-containing protein3.1e-2029.11Show/hide
Query:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK----------------------VSVARGKKQVLSSGSWSFDR
        ++L K  +++++  E++++    E         ++ CLVGKV+S KRVN+EAF++V++                            ++ +   G W FDR
Subjt:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK----------------------VSVARGKKQVLSSGSWSFDR

Query:  ALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMG----TVEEDEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAAS
        +L++LK+P+ T  +  + F+   FWVQI ++P      +M + L  ++G     ++ +  E  V   + Y+RLP+FCY CG +GH   EC+ E     A 
Subjt:  ALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMG----TVEEDEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAAS

Query:  VG--DQYGEWMRA
         G   ++G WMRA
Subjt:  VG--DQYGEWMRA

A0A6J1D765 uncharacterized protein LOC1110179022.0e-3032.65Show/hide
Query:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVAR-----------------------GKKQVLSSGSWSF
        M+E+   W+    T +E + +        L+  +++LC+V K+ +SKR++ EA R+VMK SV R                        K +VLSSG W+F
Subjt:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVAR-----------------------GKKQVLSSGSWSF

Query:  DRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDE---------------------------------DEQEVWCPVL
        +++LL+L  P AT   + ++F+ C FW+QI N+P +  + +MA  LG K+G VEE E                                 D +++WCP+ 
Subjt:  DRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDE---------------------------------DEQEVWCPVL

Query:  YERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMM
        YE+LPDFCY CG +GH  REC   + V   +  +QYG+W+RA ++
Subjt:  YERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMM

A0A6J1DVS4 uncharacterized protein LOC1110235556.1e-2433.33Show/hide
Query:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK----------------------VSVARGKKQVLSSGSWSFD
        M+++ K W++  L  EE D I        L+  +++LC VGK+  SKR+ VEAF +VMK                            K +V S G W+FD
Subjt:  MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMK----------------------VSVARGKKQVLSSGSWSFD

Query:  RALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLY
        ++LLIL    A    + +D S C FWVQI  +  +  T  MA+ LG ++G VEE                                   D +++WCP+ Y
Subjt:  RALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEE---------------------------------DEDEQEVWCPVLY

Query:  ERLPDFCYVCGCLGHVKRE
        ERLPDFCY CGC+GH  RE
Subjt:  ERLPDFCYVCGCLGHVKRE

A0A803M810 Uncharacterized protein1.4e-2027.02Show/hide
Query:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSDC
        EEL KRW+ + +T +E DV   ++  + ++  +++L LVGKV+S +  N EA +  +K    R ++++L    W FD  L++LKE   +     ++   C
Subjt:  EELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSDC

Query:  PFWVQICNVPTQWQTVQMARSLGGKMGTVEEDEDE-------------------------------QEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAV
        PFW+++ N+P   ++ +  +++  K+G V E ED+                               Q+ +    YERLP+ C+ CG LGH +++C +E  
Subjt:  PFWVQICNVPTQWQTVQMARSLGGKMGTVEEDEDE-------------------------------QEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAV

Query:  VNAASVGD--QYGEWMRAGMMGG-----------EGARR----------RYEGKGDE-VKISGDEGRVQVEQEGV-TDVLRVEQD
         +    G+  Q+G W++A    G           +G R+          +++G GD  V+   D G V+  Q  +  DV R +QD
Subjt:  VNAASVGD--QYGEWMRAGMMGG-----------EGARR----------RYEGKGDE-VKISGDEGRVQVEQEGV-TDVLRVEQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding3.2e-0931.63Show/hide
Query:  VLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDEDEQEV-WCPVLYERLPDFCYVCGCLGHVKREC
        +L  G WSF+  + +++  + T      +F   PFW+QI  +P ++ T ++  S+G +MG   E    ++V      YE+L +FC  CG L H   EC
Subjt:  VLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICNVPTQWQTVQMARSLGGKMGTVEEDEDEQEV-WCPVLYERLPDFCYVCGCLGHVKREC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAACTGATTAAGCGATGGAAATCTATGGCATTGACGGGGGAGGAGGCTGATGTTATTAGGCCAAAGGAGATGGCGGCGCCGTTGTCTGGGGCGTCGTTAGAATT
ATGCCTAGTGGGCAAGGTGATATCGTCTAAAAGGGTGAACGTGGAGGCCTTCAGAACAGTCATGAAAGTTTCGGTCGCAAGGGGAAAGAAGCAGGTGCTATCATCTGGGT
CGTGGTCGTTTGATAGGGCTCTATTGATACTGAAGGAGCCAAAGGCAACAGTGGGGTTGGTAGGTGTTGATTTCAGTGATTGTCCGTTTTGGGTTCAGATATGCAACGTG
CCGACGCAGTGGCAGACTGTGCAGATGGCGAGATCGCTGGGAGGGAAGATGGGCACCGTGGAGGAGGACGAGGATGAGCAGGAAGTATGGTGTCCGGTTCTCTATGAGCG
CTTGCCTGACTTCTGCTATGTGTGTGGATGCCTGGGGCATGTCAAGAGGGAATGCACAAGTGAGGCAGTTGTGAACGCGGCGAGTGTGGGAGACCAGTATGGGGAGTGGA
TGCGAGCTGGGATGATGGGTGGAGAAGGGGCTCGGAGAAGGTATGAAGGCAAGGGGGATGAGGTTAAGATTAGTGGGGATGAAGGAAGGGTACAGGTAGAGCAAGAAGGG
GTAACCGATGTACTTCGGGTTGAACAGGATAGCCCACTTAGTGGTGGCCCAACGGTAGGAGAGGTGGTTCATGTAGGTCTTGACGTGGAGCAGGAGCAGGATGTTCATGG
CCCAAATAAGGATCCGAAAGGTAAACAAAAGGAGGATGCCGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAACTGATTAAGCGATGGAAATCTATGGCATTGACGGGGGAGGAGGCTGATGTTATTAGGCCAAAGGAGATGGCGGCGCCGTTGTCTGGGGCGTCGTTAGAATT
ATGCCTAGTGGGCAAGGTGATATCGTCTAAAAGGGTGAACGTGGAGGCCTTCAGAACAGTCATGAAAGTTTCGGTCGCAAGGGGAAAGAAGCAGGTGCTATCATCTGGGT
CGTGGTCGTTTGATAGGGCTCTATTGATACTGAAGGAGCCAAAGGCAACAGTGGGGTTGGTAGGTGTTGATTTCAGTGATTGTCCGTTTTGGGTTCAGATATGCAACGTG
CCGACGCAGTGGCAGACTGTGCAGATGGCGAGATCGCTGGGAGGGAAGATGGGCACCGTGGAGGAGGACGAGGATGAGCAGGAAGTATGGTGTCCGGTTCTCTATGAGCG
CTTGCCTGACTTCTGCTATGTGTGTGGATGCCTGGGGCATGTCAAGAGGGAATGCACAAGTGAGGCAGTTGTGAACGCGGCGAGTGTGGGAGACCAGTATGGGGAGTGGA
TGCGAGCTGGGATGATGGGTGGAGAAGGGGCTCGGAGAAGGTATGAAGGCAAGGGGGATGAGGTTAAGATTAGTGGGGATGAAGGAAGGGTACAGGTAGAGCAAGAAGGG
GTAACCGATGTACTTCGGGTTGAACAGGATAGCCCACTTAGTGGTGGCCCAACGGTAGGAGAGGTGGTTCATGTAGGTCTTGACGTGGAGCAGGAGCAGGATGTTCATGG
CCCAAATAAGGATCCGAAAGGTAAACAAAAGGAGGATGCCGGCTGA
Protein sequenceShow/hide protein sequence
MEELIKRWKSMALTGEEADVIRPKEMAAPLSGASLELCLVGKVISSKRVNVEAFRTVMKVSVARGKKQVLSSGSWSFDRALLILKEPKATVGLVGVDFSDCPFWVQICNV
PTQWQTVQMARSLGGKMGTVEEDEDEQEVWCPVLYERLPDFCYVCGCLGHVKRECTSEAVVNAASVGDQYGEWMRAGMMGGEGARRRYEGKGDEVKISGDEGRVQVEQEG
VTDVLRVEQDSPLSGGPTVGEVVHVGLDVEQEQDVHGPNKDPKGKQKEDAG