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Lag0039548 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039548
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr2:46039505..46040002
RNA-Seq ExpressionLag0039548
SyntenyLag0039548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8682317.1 Polynucleotide adenylyltransferase family protein isoform 4 [Hibiscus syriacus]7.2e-1435.29Show/hide
Query:  CLPNNLKPGVKSLNSS-----KGPWKAI-------HRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLR--NASSEAW
        C  NNL P  K + SS        W+ +             I SN+    G G    FW D W+G   L+  FP LY+LS+ KE  V + R  NA+   W
Subjt:  CLPNNLKPGVKSLNSS-----KGPWKAI-------HRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLR--NASSEAW

Query:  NLHLRRNLNDGETNEWATLSQLLSAFTF-QDKEDYWSWTLDKSGHFSTSSLTK
        ++  RRNL D E ++W  L  LL+  +   D+ED W W  +  G FST+S  K
Subjt:  NLHLRRNLNDGETNEWATLSQLLSAFTF-QDKEDYWSWTLDKSGHFSTSSLTK

MCH99327.1 ribonuclease H protein [Trifolium medium]7.2e-1443.43Show/hide
Query:  VGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNA-SSEAWNLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS
        +G G++T FW DKW+G  +L+  FP L+S+S +K+  VA L N   SE WNL  RR L   E+  W  L  ++++ T   +ED W W LDK+G FS  S
Subjt:  VGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNA-SSEAWNLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS

OVA07023.1 Reverse transcriptase zinc-binding domain [Macleaya cordata]4.2e-1432.21Show/hide
Query:  VVAEDYSFEIWCLPNNLKPGVKSLNSSKGPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSE---AW
        ++AE Y  E     N   P         G W+A+     +  + +   VG G +T FW D W+G  +L   FP LY+ S K+ +F++D+ +  S    +W
Subjt:  VVAEDYSFEIWCLPNNLKPGVKSLNSSKGPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSE---AW

Query:  NLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS
        +L L R + + +  E A ++ LL +F   D+ED   W L+KSG F+ SS
Subjt:  NLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS

PWA63752.1 reverse transcriptase domain, Reverse transcriptase zinc-binding domain protein [Artemisia annua]1.6e-1338.58Show/hide
Query:  SKGPWKAIHRL-QPLITSNIDI------IVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVAD--LRNASSEAWNLHLRRNLNDG-ETNEWATL
        SKG W  I +L Q L   NI +      IVGKGD   FW D W+G  +L S FP LY+L ++K+  + +  +R    ++WN + RR+L  G ET+++  L
Subjt:  SKGPWKAIHRL-QPLITSNIDI------IVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVAD--LRNASSEAWNLHLRRNLNDG-ETNEWATL

Query:  SQLLSAFTFQDKEDYWSWTLDKSGHFS
         +++   T  D  D W W+L+KSG F+
Subjt:  SQLLSAFTFQDKEDYWSWTLDKSGHFS

RVW84593.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]9.4e-1436.62Show/hide
Query:  WCLPNNLKPGVKSLNSSKGPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSE----AWNLHLRRNLN
        WC     KP         G WK I     L++  +  IVG G +  FW DKW G + L  TFP L++L+++KE++VAD+ +  +E     WN +  R  N
Subjt:  WCLPNNLKPGVKSLNSSKGPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSE----AWNLHLRRNLN

Query:  DGETNEWAT-LSQLLSAFTFQDKEDYWSWTLDKSGHFSTSSL
        D E  E    + ++ S    +D ED  SWT  KSG FS  SL
Subjt:  DGETNEWAT-LSQLLSAFTFQDKEDYWSWTLDKSGHFSTSSL

TrEMBL top hitse value%identityAlignment
A0A0V0IX46 Putative ovule protein (Fragment)3.2e-1539.5Show/hide
Query:  GPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSEAWNLHLRRNLNDGETNEWATLSQLLSAF-TFQD
        G W+ I  L P + +   I +G G KTLFW + W G ASL+++FP L+SLSL+K + V ++R+A  + WNL  RR LND E N       +L  +    +
Subjt:  GPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSEAWNLHLRRNLNDGETNEWATLSQLLSAF-TFQD

Query:  KEDYWSWTLDKSGHFSTSS
        +ED   W  D  G FS  +
Subjt:  KEDYWSWTLDKSGHFSTSS

A0A0V0IZY8 Putative ovule protein (Fragment)3.2e-1539.5Show/hide
Query:  GPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSEAWNLHLRRNLNDGETNEWATLSQLLSAF-TFQD
        G W+ I  L P + +   I +G G KTLFW + W G ASL+++FP L+SLSL+K + V ++R+A  + WNL  RR LND E N       +L  +    +
Subjt:  GPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSEAWNLHLRRNLNDGETNEWATLSQLLSAF-TFQD

Query:  KEDYWSWTLDKSGHFSTSS
        +ED   W  D  G FS  +
Subjt:  KEDYWSWTLDKSGHFSTSS

A0A200QJ46 Reverse transcriptase zinc-binding domain2.1e-1432.21Show/hide
Query:  VVAEDYSFEIWCLPNNLKPGVKSLNSSKGPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSE---AW
        ++AE Y  E     N   P         G W+A+     +  + +   VG G +T FW D W+G  +L   FP LY+ S K+ +F++D+ +  S    +W
Subjt:  VVAEDYSFEIWCLPNNLKPGVKSLNSSKGPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSE---AW

Query:  NLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS
        +L L R + + +  E A ++ LL +F   D+ED   W L+KSG F+ SS
Subjt:  NLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS

A0A392NHI5 Ribonuclease H protein (Fragment)3.5e-1443.43Show/hide
Query:  VGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNA-SSEAWNLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS
        +G G++T FW DKW+G  +L+  FP L+S+S +K+  VA L N   SE WNL  RR L   E+  W  L  ++++ T   +ED W W LDK+G FS  S
Subjt:  VGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNA-SSEAWNLHLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSS

A0A6A2YSK0 Polynucleotide adenylyltransferase family protein isoform 43.5e-1435.29Show/hide
Query:  CLPNNLKPGVKSLNSS-----KGPWKAI-------HRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLR--NASSEAW
        C  NNL P  K + SS        W+ +             I SN+    G G    FW D W+G   L+  FP LY+LS+ KE  V + R  NA+   W
Subjt:  CLPNNLKPGVKSLNSS-----KGPWKAI-------HRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLR--NASSEAW

Query:  NLHLRRNLNDGETNEWATLSQLLSAFTF-QDKEDYWSWTLDKSGHFSTSSLTK
        ++  RRNL D E ++W  L  LL+  +   D+ED W W  +  G FST+S  K
Subjt:  NLHLRRNLNDGETNEWATLSQLLSAFTF-QDKEDYWSWTLDKSGHFSTSSLTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGAGATTTTACAAAGAAAAGGATGCGTTGTGGCAGAAGATTATAGCTTCGAAATATGGTGTCTCCCTAACAATCTCAAACCGGGAGTTAAATCTTTGAATTC
GTCCAAAGGCCCATGGAAGGCCATTCACAGATTGCAGCCATTGATAACCAGTAACATTGATATCATAGTTGGTAAGGGAGACAAGACTCTGTTTTGGGTTGATAAATGGA
TTGGTCCCGCGAGCCTTCAGTCCACCTTTCCTTTGTTATATAGTTTATCTTTGAAGAAGGAATCTTTCGTTGCTGATCTAAGGAATGCTTCCTCTGAAGCTTGGAATTTA
CATTTGAGAAGAAACCTAAATGATGGTGAGACCAATGAATGGGCCACATTATCCCAACTCCTATCTGCCTTCACCTTCCAAGATAAGGAGGATTATTGGTCATGGACCCT
TGATAAATCTGGACATTTTTCTACCAGCTCCCTCACTAAAAAGGCTGGCCTCCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGGAGATTTTACAAAGAAAAGGATGCGTTGTGGCAGAAGATTATAGCTTCGAAATATGGTGTCTCCCTAACAATCTCAAACCGGGAGTTAAATCTTTGAATTC
GTCCAAAGGCCCATGGAAGGCCATTCACAGATTGCAGCCATTGATAACCAGTAACATTGATATCATAGTTGGTAAGGGAGACAAGACTCTGTTTTGGGTTGATAAATGGA
TTGGTCCCGCGAGCCTTCAGTCCACCTTTCCTTTGTTATATAGTTTATCTTTGAAGAAGGAATCTTTCGTTGCTGATCTAAGGAATGCTTCCTCTGAAGCTTGGAATTTA
CATTTGAGAAGAAACCTAAATGATGGTGAGACCAATGAATGGGCCACATTATCCCAACTCCTATCTGCCTTCACCTTCCAAGATAAGGAGGATTATTGGTCATGGACCCT
TGATAAATCTGGACATTTTTCTACCAGCTCCCTCACTAAAAAGGCTGGCCTCCCGTGA
Protein sequenceShow/hide protein sequence
MDLEILQRKGCVVAEDYSFEIWCLPNNLKPGVKSLNSSKGPWKAIHRLQPLITSNIDIIVGKGDKTLFWVDKWIGPASLQSTFPLLYSLSLKKESFVADLRNASSEAWNL
HLRRNLNDGETNEWATLSQLLSAFTFQDKEDYWSWTLDKSGHFSTSSLTKKAGLP