; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039556 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039556
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:46241039..46244132
RNA-Seq ExpressionLag0039556
SyntenyLag0039556
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]2.9e-1245.56Show/hide
Query:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS
        + NPGIVR ++   +FELKPVMFQML    QF G   EDPH HL+SF+++ +   I  V+ E L++ LFP SLRD A+   +++  + V+
Subjt:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS

XP_030483210.1 uncharacterized protein LOC115699807 [Cannabis sativa]1.7e-1247.62Show/hide
Query:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI
        + NPGIVR ++   +FELKPVMFQML    QF G   EDPH HL+ F+++ +   +P VT + L++ LFP SLRD A+   +S+
Subjt:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI

XP_038880527.1 uncharacterized protein LOC120072192 [Benincasa hispida]1.2e-1350.6Show/hide
Query:  FNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI
        F+PGI+    D  RFE+K VM QML    QF G   EDPH+H+K F++ CN  +IPR+T E++++ LFP SLRD AK   SS+
Subjt:  FNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI

XP_038889254.1 uncharacterized protein LOC120079150 [Benincasa hispida]7.6e-1348.19Show/hide
Query:  FNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI
        F+PGI+    +  RFE+K VM QML   +QF G   EDPH+H+K F++ CN  +IP +T E +++ LFP SLRD AK   SS+
Subjt:  FNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI

XP_038890753.1 uncharacterized protein LOC120080236 [Benincasa hispida]3.7e-1551.81Show/hide
Query:  FNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI
        F+PGI+   LD  RFE+K VM QML    QF G   EDPH+H+K F++ CN  +IPR+T E +++ LFP SLRD AK + SS+
Subjt:  FNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI

TrEMBL top hitse value%identityAlignment
A0A392NID4 Retrotrans_gag domain-containing protein (Fragment)2.7e-1140.91Show/hide
Query:  NPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS
        N GIV+ ++   +FE KP+MFQML    QF   + EDPH HLK F+ + +   IP +T++  ++ LFP SLRD  K   +S+  N ++
Subjt:  NPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS

A0A6J1EEI2 uncharacterized protein LOC1114333944.5e-1147.5Show/hide
Query:  MRKFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAK
        + + NP I+R ++    FELKPVMFQML    QF G   EDPH HLKSF+ + +     RV  + +++ LFP SLRD AK
Subjt:  MRKFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAK

U5CUI2 Retrotrans_gag domain-containing protein1.4e-1245.56Show/hide
Query:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS
        + NPGIVR ++   +FELKPVMFQML    QF G   EDPH HL+SF+++ +   I  V+ E L++ LFP SLRD A+   +++  + V+
Subjt:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS

U5CUK7 Uncharacterized protein4.5e-1142.22Show/hide
Query:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS
        + N GIVR ++    FELKPVMFQML    QF G   EDPH H++SF+++ +   +  V+ E L++ LFP SLRD A+   +++  + V+
Subjt:  KFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVS

W9RHB3 Putative disease resistance RPP13-like protein 12.7e-1146.34Show/hide
Query:  NPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI
        NP IVR  ++   FELKPVMFQML    QF G + +DPH HL+ F+++ +   +P V  E L++ LFP SLRD A+   +S+
Subjt:  NPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTAAATTCAACCCAGGGATAGTACGTACTAAGTTGGATACAGAAAGGTTTGAACTTAAGCCTGTTATGTTTCAAATGCTTACTGCAACAGAACAGTTTGTAGGATG
TTCATTAGAAGATCCTCACTCTCACCTCAAATCATTTATCGACATTTGCAACAAGCTCATCATTCCAAGAGTTACCCTAGAACAACTTCAAGTCATATTATTTCCTTGCT
CGCTACGAGATGCTGCTAAAGGTATAAAGAGTAGCATTTCCAAAAATTTGGTCTCCTTCAGAGTTCCACATCTCCCTCTCTTAACCGTAGCAAGTAGTTACGAGATGCTC
TCCCTTTTCTGGCAGAACTTACCTAATATGATTACCAAACCTGTGTCTGGAGCTAAGTTAAACTACTGTAATGAAGGGATCAAGATGGTCTCCTTCAGGTTACCGTACTA
TCTGGAAATACAGGGCCCAGGATTCGGAATCCGGATTCGGCCATTAACGATCCCGGCATTCCCCTGCGACCTGGCCACGCCACCATACTTTTCTGAAACTGCTTCAAAGA
ATGAAGACTGTCCCCACAAACCAACACTGGGTCCTTTTAACATGCTTTGTCCTCACTCACATGCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTAAATTCAACCCAGGGATAGTACGTACTAAGTTGGATACAGAAAGGTTTGAACTTAAGCCTGTTATGTTTCAAATGCTTACTGCAACAGAACAGTTTGTAGGATG
TTCATTAGAAGATCCTCACTCTCACCTCAAATCATTTATCGACATTTGCAACAAGCTCATCATTCCAAGAGTTACCCTAGAACAACTTCAAGTCATATTATTTCCTTGCT
CGCTACGAGATGCTGCTAAAGGTATAAAGAGTAGCATTTCCAAAAATTTGGTCTCCTTCAGAGTTCCACATCTCCCTCTCTTAACCGTAGCAAGTAGTTACGAGATGCTC
TCCCTTTTCTGGCAGAACTTACCTAATATGATTACCAAACCTGTGTCTGGAGCTAAGTTAAACTACTGTAATGAAGGGATCAAGATGGTCTCCTTCAGGTTACCGTACTA
TCTGGAAATACAGGGCCCAGGATTCGGAATCCGGATTCGGCCATTAACGATCCCGGCATTCCCCTGCGACCTGGCCACGCCACCATACTTTTCTGAAACTGCTTCAAAGA
ATGAAGACTGTCCCCACAAACCAACACTGGGTCCTTTTAACATGCTTTGTCCTCACTCACATGCTTTCTAG
Protein sequenceShow/hide protein sequence
MRKFNPGIVRTKLDTERFELKPVMFQMLTATEQFVGCSLEDPHSHLKSFIDICNKLIIPRVTLEQLQVILFPCSLRDAAKGIKSSISKNLVSFRVPHLPLLTVASSYEML
SLFWQNLPNMITKPVSGAKLNYCNEGIKMVSFRLPYYLEIQGPGFGIRIRPLTIPAFPCDLATPPYFSETASKNEDCPHKPTLGPFNMLCPHSHAF