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Lag0039559 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039559
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:46295485..46295829
RNA-Seq ExpressionLag0039559
SyntenyLag0039559
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_192824169.1 retrotransposon gag domain-containing protein, partial [Escherichia coli]8.0e-0434.65Show/hide
Query:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT
        M++ FL++Y+  ++     ++I+N+ Q  +E F+EF  RF  L     +  +SE  LI  F +GL  D RRM+N+A  G ++  T   A  +I +LAE  
Subjt:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT

Query:  R
        R
Subjt:  R

XP_010667080.1 PREDICTED: uncharacterized protein LOC104884176 [Beta vulgaris subsp. vulgaris]1.2e-0432.54Show/hide
Query:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT
        M++ FL+K+   + L E  R I+NI Q  +E+ ++++ RF  L     +  F+E  L+     GL PD RRM+N+A  G++   T   A E+I + AE +
Subjt:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT

Query:  RF-----------RANSPDELESQIS
        R             A+S   LES++S
Subjt:  RF-----------RANSPDELESQIS

XP_010678235.1 PREDICTED: uncharacterized protein LOC104893798 [Beta vulgaris subsp. vulgaris]3.6e-0431.75Show/hide
Query:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT
        M++ FL+K+   + L E  R I+NI Q  +E+ ++++ RF  L     +  F+E  L+     GL PD RRM+N+A  G++   T   A E+I +  E +
Subjt:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT

Query:  RF-----------RANSPDELESQIS
        R             A+S   LES++S
Subjt:  RF-----------RANSPDELESQIS

XP_010684910.1 PREDICTED: uncharacterized protein LOC104899419 [Beta vulgaris subsp. vulgaris]2.7e-0431.75Show/hide
Query:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT
        M++ FL+K+   + L E  R I+NI Q  +E+ ++++ RF  L     +  F+E  L+     GL PD RRM+N+A  G++   T   A E+I + AE +
Subjt:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRF-NLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT

Query:  RF-----------RANSPDELESQIS
                      A+S   LES++S
Subjt:  RF-----------RANSPDELESQIS

XP_013607986.1 PREDICTED: uncharacterized protein LOC106314701 [Brassica oleracea var. oleracea]8.0e-0429.46Show/hide
Query:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRFNLYYME-HHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT
        +R  FL  +H  +       +I+N  Q  +E FHE   R+  Y  E  H  F +D ++E F +G+  + R  L+S+ +GD +  T   A+E+IE +A  +
Subjt:  MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRFNLYYME-HHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVT

Query:  RFRANSPDELES
          +    D  +S
Subjt:  RFRANSPDELES

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAATTTTCCTGAAGAAGTATCACCTCATTACACTGCTAATAGAAGCCACCAGAAGAATTGCCAACATTGCACAATCACTTGAAGAGTTGTTCCACGAGTTCGT
GAGCCGCTTCAATCTATACTACATGGAACATCACACCCCATTCTCAGAGGACTCCCTGATAGAAAGCTTCTGCGAAGGGCTAAAACCCGATCATAGAAGAATGCTTAACT
CAGCTAGGGATGGTGATGTGCTTGCTACAACACTTGGTGTGGCGTGGGAGATTATTGAAAAACTGGCGGAAGTCACTAGATTCCGTGCCAACTCCCCTGATGAGCTAGAG
AGCCAAATCTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAATTTTCCTGAAGAAGTATCACCTCATTACACTGCTAATAGAAGCCACCAGAAGAATTGCCAACATTGCACAATCACTTGAAGAGTTGTTCCACGAGTTCGT
GAGCCGCTTCAATCTATACTACATGGAACATCACACCCCATTCTCAGAGGACTCCCTGATAGAAAGCTTCTGCGAAGGGCTAAAACCCGATCATAGAAGAATGCTTAACT
CAGCTAGGGATGGTGATGTGCTTGCTACAACACTTGGTGTGGCGTGGGAGATTATTGAAAAACTGGCGGAAGTCACTAGATTCCGTGCCAACTCCCCTGATGAGCTAGAG
AGCCAAATCTCGTAG
Protein sequenceShow/hide protein sequence
MRRIFLKKYHLITLLIEATRRIANIAQSLEELFHEFVSRFNLYYMEHHTPFSEDSLIESFCEGLKPDHRRMLNSARDGDVLATTLGVAWEIIEKLAEVTRFRANSPDELE
SQIS