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Lag0039560 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039560
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr2:46360249..46361221
RNA-Seq ExpressionLag0039560
SyntenyLag0039560
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]4.6e-2451.26Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        MK ++  KFK+P  K+YDG  D + HLD Y  W D +G +EA +CR FSFTL    R WF +L RKSI S KELARAFVTQF G  ++      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SL DY++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]4.4e-2755.46Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        MK ++  KFK+PT KQ+DG  DLV HLD Y  WMD +G SEA KCR FS TL   AR WF +L R SI S K LA+AFVTQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SLHDY++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]3.3e-2248.74Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        MK + + KFK+P   +YDG  D + HLD Y  W D +   EA +CR FSFTL   AR WF +L R SI S KELA AFVTQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SL +Y++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.7e-2352.1Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        M+ ++  KFK+PT KQ+D   D V HLD Y  WMD +G SEA +CR FS TL   AR WF +L R SI S K LARAFVTQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SL DY++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.3e-2349.59Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        M+ ++  KFK+PT K +DG  + V HLD Y  WMD +G S+A +CR FS TL   AR WF +L R SI S K LARAF+TQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQFK
           +SLHDY++ F+ E LQ +
Subjt:  GLEKSLHDYISHFSNEALQFK

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.2e-2451.26Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        MK ++  KFK+P  K+YDG  D + HLD Y  W D +G +EA +CR FSFTL    R WF +L RKSI S KELARAFVTQF G  ++      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SL DY++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

A0A6J1D7D2 uncharacterized protein LOC1110183072.1e-2755.46Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        MK ++  KFK+PT KQ+DG  DLV HLD Y  WMD +G SEA KCR FS TL   AR WF +L R SI S K LA+AFVTQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SLHDY++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

A0A6J1DWY0 uncharacterized protein LOC1110252938.4e-2452.1Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        M+ ++  KFK+PT KQ+D   D V HLD Y  WMD +G SEA +CR FS TL   AR WF +L R SI S K LARAFVTQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SL DY++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

A0A6J1DZ49 uncharacterized protein LOC1110248511.6e-2248.74Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        MK + + KFK+P   +YDG  D + HLD Y  W D +   EA +CR FSFTL   AR WF +L R SI S KELA AFVTQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQ
           +SL +Y++ F+ E LQ
Subjt:  GLEKSLHDYISHFSNEALQ

A0A6J1E1E7 uncharacterized protein LOC1110255481.1e-2349.59Show/hide
Query:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ
        M+ ++  KFK+PT K +DG  + V HLD Y  WMD +G S+A +CR FS TL   AR WF +L R SI S K LARAF+TQF+G R +      LLT KQ
Subjt:  MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQ

Query:  GLEKSLHDYISHFSNEALQFK
           +SLHDY++ F+ E LQ +
Subjt:  GLEKSLHDYISHFSNEALQFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTGAAATACAACAGAAGTTCAAGGTTCCAACCTTCAAACAGTATGACGGTAAGAAAGACCTTGTGCACCACTTGGATACGTACATGTCATGGATGGATTTCCA
TGGAGCTTCCGAGGCCACCAAATGCCGAGCCTTTTCTTTCACTTTAATAGTAGGGGCGAGACAATGGTTTGGAAAGTTGTTAAGAAAATCTATAGGTTCGCTCAAAGAGT
TGGCTCGAGCTTTTGTCACACAATTTTTGGGGTCAAGAGACCAGCGTAATTCTCAATTCAACCTACTAACTAATAAGCAAGGATTGGAAAAGAGTTTGCATGATTACATA
TCACATTTCAGCAATGAAGCACTTCAGTTTAAAGATGAGATTGAAACACCAATTCGCCATGGATTTCTGAAAGAGTTTGTTATAGATGAGAACCAGAAGAGGCCAAGGCT
GATCAGGGATGGTCGAGGCCGAGGAGATGATGAACCCCCTTTGGAGATCAGAACTATCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTGAAATACAACAGAAGTTCAAGGTTCCAACCTTCAAACAGTATGACGGTAAGAAAGACCTTGTGCACCACTTGGATACGTACATGTCATGGATGGATTTCCA
TGGAGCTTCCGAGGCCACCAAATGCCGAGCCTTTTCTTTCACTTTAATAGTAGGGGCGAGACAATGGTTTGGAAAGTTGTTAAGAAAATCTATAGGTTCGCTCAAAGAGT
TGGCTCGAGCTTTTGTCACACAATTTTTGGGGTCAAGAGACCAGCGTAATTCTCAATTCAACCTACTAACTAATAAGCAAGGATTGGAAAAGAGTTTGCATGATTACATA
TCACATTTCAGCAATGAAGCACTTCAGTTTAAAGATGAGATTGAAACACCAATTCGCCATGGATTTCTGAAAGAGTTTGTTATAGATGAGAACCAGAAGAGGCCAAGGCT
GATCAGGGATGGTCGAGGCCGAGGAGATGATGAACCCCCTTTGGAGATCAGAACTATCTTTTGA
Protein sequenceShow/hide protein sequence
MKAEIQQKFKVPTFKQYDGKKDLVHHLDTYMSWMDFHGASEATKCRAFSFTLIVGARQWFGKLLRKSIGSLKELARAFVTQFLGSRDQRNSQFNLLTNKQGLEKSLHDYI
SHFSNEALQFKDEIETPIRHGFLKEFVIDENQKRPRLIRDGRGRGDDEPPLEIRTIF