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Lag0039579 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039579
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:46786661..46787044
RNA-Seq ExpressionLag0039579
SyntenyLag0039579
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]3.4e-1148.33Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S KG  P+SSS S P+PMSA QY MDLGFT+V R R++ +S+ I    ES + PPRPS +L  PS             V QMRP  SP   SS+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPKP
        + PTT+  AV   KRFVP+P
Subjt:  SIPTTFVDAVQPPKRFVPKP

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]3.4e-1144.72Show/hide
Query:  RDKASSSLKGKSPASSSKSPAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQ
        R  ++SS   + P+SS+ +P+P+SADQY MDLGFT V R  ++S  + I    ES + PPRPS +L  PS           + V QMRP  SP   SS++
Subjt:  RDKASSSLKGKSPASSSKSPAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQ

Query:  QGSSIPTTFVDAVQPPKRFVPKP
        + S+ PTT+  AV P KRFVP+P
Subjt:  QGSSIPTTFVDAVQPPKRFVPKP

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]7.5e-1146.22Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S +G  P+SSS S P+PMSADQY MDLGFT V R R +S+ +QI    +S + PPR SA+L  PS           + V QMRP  SP    S+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPK
        + PTT+   + P KRFVP+
Subjt:  SIPTTFVDAVQPPKRFVPK

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]1.2e-1147.06Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S KG  P+SSS S P+PMS DQY MDLG+T V + R+KS+ + IR  MES + PPRPS +L  P              V QMR + SP   SS+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPK
        ++PTT+  AV P K+FVP+
Subjt:  SIPTTFVDAVQPPKRFVPK

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]1.2e-1350Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S KG  P+SSS S P+PMSADQY+MDLGFT V R R++S+S++     ES + PPRP A+L  PS             V QMRP  SP   SS+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPKP
        + PTT+  AV P KRFVP+P
Subjt:  SIPTTFVDAVQPPKRFVPKP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.6e-1144.72Show/hide
Query:  RDKASSSLKGKSPASSSKSPAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQ
        R  ++SS   + P+SS+ +P+P+SADQY MDLGFT V R  ++S  + I    ES + PPRPS +L  PS           + V QMRP  SP   SS++
Subjt:  RDKASSSLKGKSPASSSKSPAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQ

Query:  QGSSIPTTFVDAVQPPKRFVPKP
        + S+ PTT+  AV P KRFVP+P
Subjt:  QGSSIPTTFVDAVQPPKRFVPKP

A0A5A7URC1 Uncharacterized protein3.6e-1146.67Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S KG  P+SSS S  +PM++DQY MDL FT V R R++S+S++     ES + PPRP A+L  PS             V QMRP  SP   SS+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPKP
        + PTT+  AV P KRFVP+P
Subjt:  SIPTTFVDAVQPPKRFVPKP

A0A5D3BI61 Uncharacterized protein5.6e-1247.06Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S KG  P+SSS S P+PMS DQY MDLG+T V + R+KS+ + IR  MES + PPRPS +L  P              V QMR + SP   SS+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPK
        ++PTT+  AV P K+FVP+
Subjt:  SIPTTFVDAVQPPKRFVPK

A0A5D3CKX1 Uncharacterized protein6.0e-1450Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S KG  P+SSS S P+PMSADQY+MDLGFT V R R++S+S++     ES + PPRP A+L  PS             V QMRP  SP   SS+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPKP
        + PTT+  AV P KRFVP+P
Subjt:  SIPTTFVDAVQPPKRFVPKP

E5GCE6 Uncharacterized protein1.6e-1148.33Show/hide
Query:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS
        S+S KG  P+SSS S P+PMSA QY MDLGFT+V R R++ +S+ I    ES + PPRPS +L  PS             V QMRP  SP   SS+++ S
Subjt:  SSSLKGKSPASSSKS-PAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGS

Query:  SIPTTFVDAVQPPKRFVPKP
        + PTT+  AV   KRFVP+P
Subjt:  SIPTTFVDAVQPPKRFVPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCAGCGAGACAAAGCCTCTTCTTCTTTAAAGGGCAAAAGCCCAGCTTCATCTTCAAAATCTCCAGCTCCTATGAGCGCAGATCAATATGACATGGATCTTGG
CTTCACTCTAGTGAATCGTCCAAGAACCAAAAGTGCATCCCTTCAAATCAGAGATTCAATGGAGTCTTTAGCTCCACCACCGAGGCCATCCGCCTCTCTTGCATGGCCTT
CTGCCATTCCACCAATGAGACCTATTGTCTCTCCAACCTCTGTAACTCAAATGAGACCTACTGTCTCTCCATCTACCCAATCTTCTTCTCAACAGGGATCTTCTATCCCT
ACAACTTTTGTGGATGCTGTTCAGCCTCCCAAAAGGTTTGTTCCAAAACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATCAGCGAGACAAAGCCTCTTCTTCTTTAAAGGGCAAAAGCCCAGCTTCATCTTCAAAATCTCCAGCTCCTATGAGCGCAGATCAATATGACATGGATCTTGG
CTTCACTCTAGTGAATCGTCCAAGAACCAAAAGTGCATCCCTTCAAATCAGAGATTCAATGGAGTCTTTAGCTCCACCACCGAGGCCATCCGCCTCTCTTGCATGGCCTT
CTGCCATTCCACCAATGAGACCTATTGTCTCTCCAACCTCTGTAACTCAAATGAGACCTACTGTCTCTCCATCTACCCAATCTTCTTCTCAACAGGGATCTTCTATCCCT
ACAACTTTTGTGGATGCTGTTCAGCCTCCCAAAAGGTTTGTTCCAAAACCATAG
Protein sequenceShow/hide protein sequence
MSDQRDKASSSLKGKSPASSSKSPAPMSADQYDMDLGFTLVNRPRTKSASLQIRDSMESLAPPPRPSASLAWPSAIPPMRPIVSPTSVTQMRPTVSPSTQSSSQQGSSIP
TTFVDAVQPPKRFVPKP