; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039608 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039608
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr2:47176298..47177790
RNA-Seq ExpressionLag0039608
SyntenyLag0039608
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.0e-10766.98Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------
        + VGS L+YLLLYVDDII+TG D  Y+ +LKN LA EF+IS+LG LKYFLGLE+ ++ DGIFVNQAKYL+DLL T GM+SAK+C+TPM            
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------

Query:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI
                          FTRPDI+ +VNRVSQFM +PTV+HFS VKRILRYL GT   GI FR+ + SL  FCDSD A DTSDRRSTSGFIAFL S+PI
Subjt:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI

Query:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA
        SWS+KKQS VSRSSTEAEY SLATTT DLYW+RQLL DLHV L   PTL CDNVSAISLA+NP+FHARTK IEIDYHFV EKV  KDIS+ YI S +QLA
Subjt:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA

Query:  DIFTKPLSSQTFLFVRDKLLT
        DI TKPL S TFL +RDKLLT
Subjt:  DIFTKPLSSQTFLFVRDKLLT

KAA0047933.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.0e-9461.68Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------
        + VGSSLTYLLLYVD+II+T PD  Y+ +LKN LA EF+ISDLG LKYFLGLE+ ++ DGIF NQAKYL+DLL T GM+S K C+TPM            
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------

Query:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI
                          FT P+I+F+VNRVS  + +  +  F             +PFGI FR+++ SL  FCDSD   DTSDRRSTSGFIAFL S+PI
Subjt:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI

Query:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA
        SW +KKQSTVSRSSTEAEYRSLATTT DLYW+RQLL DLHV L   PTL CDNV AISL +NP+FHARTK IEIDYHFVREKV RKDIS+RYISS +QL 
Subjt:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA

Query:  DIFTKPLSSQTFLFVRDKLLT
        DI TKPL S TFL + DKLLT
Subjt:  DIFTKPLSSQTFLFVRDKLLT

KAA0057165.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-8764.58Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------
        + VGSSLTYLLLYV +II+ GPD  Y+ +LKN LA EF+ISDLG LKYFLGLE+ ++ DGIFVNQAKYL+DLL T  M+SAK C+TPM            
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------

Query:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI
                          FTRPDI+F++NRVSQFM +PTV+HFS VKRILRYL GT   GI FR+ + SL  FCDS+ AGDTSD+RSTS FIAFL S+PI
Subjt:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI

Query:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKI
        SWS+KKQSTVSRSSTEAEYR LATTT DLYW+RQLL DLHV L   PTL CDNVSAISLA+N +FHART +
Subjt:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKI

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.1e-9666.11Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPMFTRPDISFAVNR
        + VGSSLTYLLLYVDDII+TGPD  Y+S LKN LA EF+ISDLG LKYFLGLE+ ++ DGI VNQA+YL+DLL T GM+SAK+C+TP+ T  D+      
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPMFTRPDISFAVNR

Query:  VSQ-------FMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSSTEAEYRSLA
         +        FM +PTV+HFS VKRILRY                         L GDTSDRRSTSGFIAFL S+PISWS+KKQST+SRSSTEAEYRSLA
Subjt:  VSQ-------FMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSSTEAEYRSLA

Query:  TTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLFVRDKLLT
        TTT DLYW+RQLL DLHV L   P L CDN+SAISLA+NP+FHARTK IEIDYHFVREKV RKDIS+RYISS +QLADI TKPL S TFL +RDKLLT
Subjt:  TTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLFVRDKLLT

KAA0065957.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.2e-8861.24Show/hide
Query:  DDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------------
        DDII+TGPD  Y+S+LKN LA +F+ISDLG LKYFLGL++ ++ DGIFVNQAKYL+DLL T+ M+S K+C+T M                          
Subjt:  DDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------------

Query:  ----FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSS
            FTRPDI+F+VNRVSQFM +PTV+HFS +KRILRY                         L GDTSDRRSTSGFIAFL S+PISWS+KKQSTVS SS
Subjt:  ----FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSS

Query:  TEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLF
        TEAEY SLATTT +LYW+RQLL DLHV+L   PTL CDNVSAISLA+NP+FHARTK IEI YHFVREKV  KDI + YISS +QLADI TKPL S  FL 
Subjt:  TEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLF

Query:  VRDKLLT
         RDKLLT
Subjt:  VRDKLLT

TrEMBL top hitse value%identityAlignment
A0A5A7TPR4 Putative mitochondrial protein9.9e-10866.98Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------
        + VGS L+YLLLYVDDII+TG D  Y+ +LKN LA EF+IS+LG LKYFLGLE+ ++ DGIFVNQAKYL+DLL T GM+SAK+C+TPM            
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------

Query:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI
                          FTRPDI+ +VNRVSQFM +PTV+HFS VKRILRYL GT   GI FR+ + SL  FCDSD A DTSDRRSTSGFIAFL S+PI
Subjt:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI

Query:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA
        SWS+KKQS VSRSSTEAEY SLATTT DLYW+RQLL DLHV L   PTL CDNVSAISLA+NP+FHARTK IEIDYHFV EKV  KDIS+ YI S +QLA
Subjt:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA

Query:  DIFTKPLSSQTFLFVRDKLLT
        DI TKPL S TFL +RDKLLT
Subjt:  DIFTKPLSSQTFLFVRDKLLT

A0A5A7TWG2 Putative mitochondrial protein9.6e-9561.68Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------
        + VGSSLTYLLLYVD+II+T PD  Y+ +LKN LA EF+ISDLG LKYFLGLE+ ++ DGIF NQAKYL+DLL T GM+S K C+TPM            
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------

Query:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI
                          FT P+I+F+VNRVS  + +  +  F             +PFGI FR+++ SL  FCDSD   DTSDRRSTSGFIAFL S+PI
Subjt:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI

Query:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA
        SW +KKQSTVSRSSTEAEYRSLATTT DLYW+RQLL DLHV L   PTL CDNV AISL +NP+FHARTK IEIDYHFVREKV RKDIS+RYISS +QL 
Subjt:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLA

Query:  DIFTKPLSSQTFLFVRDKLLT
        DI TKPL S TFL + DKLLT
Subjt:  DIFTKPLSSQTFLFVRDKLLT

A0A5A7UZE5 Putative mitochondrial protein1.0e-9666.11Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPMFTRPDISFAVNR
        + VGSSLTYLLLYVDDII+TGPD  Y+S LKN LA EF+ISDLG LKYFLGLE+ ++ DGI VNQA+YL+DLL T GM+SAK+C+TP+ T  D+      
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPMFTRPDISFAVNR

Query:  VSQ-------FMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSSTEAEYRSLA
         +        FM +PTV+HFS VKRILRY                         L GDTSDRRSTSGFIAFL S+PISWS+KKQST+SRSSTEAEYRSLA
Subjt:  VSQ-------FMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSSTEAEYRSLA

Query:  TTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLFVRDKLLT
        TTT DLYW+RQLL DLHV L   P L CDN+SAISLA+NP+FHARTK IEIDYHFVREKV RKDIS+RYISS +QLADI TKPL S TFL +RDKLLT
Subjt:  TTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLFVRDKLLT

A0A5A7VFU7 Putative mitochondrial protein6.0e-8961.24Show/hide
Query:  DDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------------
        DDII+TGPD  Y+S+LKN LA +F+ISDLG LKYFLGL++ ++ DGIFVNQAKYL+DLL T+ M+S K+C+T M                          
Subjt:  DDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------------

Query:  ----FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSS
            FTRPDI+F+VNRVSQFM +PTV+HFS +KRILRY                         L GDTSDRRSTSGFIAFL S+PISWS+KKQSTVS SS
Subjt:  ----FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSS

Query:  TEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLF
        TEAEY SLATTT +LYW+RQLL DLHV+L   PTL CDNVSAISLA+NP+FHARTK IEI YHFVREKV  KDI + YISS +QLADI TKPL S  FL 
Subjt:  TEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLF

Query:  VRDKLLT
         RDKLLT
Subjt:  VRDKLLT

A0A5D3DUH6 Putative mitochondrial protein1.1e-8764.58Show/hide
Query:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------
        + VGSSLTYLLLYV +II+ GPD  Y+ +LKN LA EF+ISDLG LKYFLGLE+ ++ DGIFVNQAKYL+DLL T  M+SAK C+TPM            
Subjt:  KKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM------------

Query:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI
                          FTRPDI+F++NRVSQFM +PTV+HFS VKRILRYL GT   GI FR+ + SL  FCDS+ AGDTSD+RSTS FIAFL S+PI
Subjt:  ------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPI

Query:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKI
        SWS+KKQSTVSRSSTEAEYR LATTT DLYW+RQLL DLHV L   PTL CDNVSAISLA+N +FHART +
Subjt:  SWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKI

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.5e-4735.02Show/hide
Query:  YLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTP---------------------
        Y+LLYVDD++I   D + ++  K +L  +F+++DL  +K+F+G+ +    D I+++Q+ Y+  +L+   M +  A  TP                     
Subjt:  YLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTP---------------------

Query:  ----------MFTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLS----LTAFCDSDLAGDTSDRRSTSGFI-AFLSSSPISW
                  + TRPD++ AVN +S++  +     +  +KR+LRYL GT    ++F++ NL+    +  + DSD AG   DR+ST+G++      + I W
Subjt:  ----------MFTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLS----LTAFCDSDLAGDTSDRRSTSGFI-AFLSSSPISW

Query:  SAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADI
        + K+Q++V+ SSTEAEY +L     +  WL+ LL  +++ L  P  +  DN   IS+ANNP  H R K I+I YHF RE+V    I + YI +++QLADI
Subjt:  SAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADI

Query:  FTKPLSSQTFLFVRDKL
        FTKPL +  F+ +RDKL
Subjt:  FTKPLSSQTFLFVRDKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.9e-4133.55Show/hide
Query:  LLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEV--HNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM-------------------
        LLLYVDD++I G D   ++ LK  L+  F + DLG  +  LG+++    TS  ++++Q KY+  +L    M +AK   TP+                   
Subjt:  LLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEV--HNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM-------------------

Query:  -------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSP
                            TRPDI+ AV  VS+F++ P   H+  VK ILRYL GT    + F  ++  L  + D+D+AGD  +R+S++G++   S   
Subjt:  -------------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSP

Query:  ISWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQL
        ISW +K Q  V+ S+TEAEY +   T  ++ WL++ L++L +       + CD+ SAI L+ N ++HARTK I++ YH++RE V  + + V  IS+ +  
Subjt:  ISWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQL

Query:  ADIFTKPLSSQTF
        AD+ TK +    F
Subjt:  ADIFTKPLSSQTF

P92519 Uncharacterized mitochondrial protein AtMg008104.1e-4243.75Show/hide
Query:  YLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------
        YLLLYVDDI++TG  ++ L++L   L++ F + DLG + YFLG+++     G+F++Q KY   +L   GM   K   TP+                    
Subjt:  YLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------

Query:  ----------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGI-MFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQ
                   TRPDIS+AVN V Q M  PT+  F ++KR+LRY+ GT   G+ + + + L++ AFCDSD AG TS RRST+GF  FL  + ISWSAK+Q
Subjt:  ----------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGI-MFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQ

Query:  STVSRSSTEAEYRSLATTTTDLYW
         TVSRSSTE EYR+LA T  +L W
Subjt:  STVSRSSTEAEYRSLATTTTDLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.6e-6845.66Show/hide
Query:  GSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM---------------
        G S+ Y+L+YVDDI+ITG D + L    ++L+  F + D   L YFLG+E      G+ ++Q +Y+ DLLA   M +AK   TPM               
Subjt:  GSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM---------------

Query:  ----------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRAN-LSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPIS
                        FTRPDIS+AVNR+SQFM  PT  H   +KRILRYL+GT   GI  ++ N LSL A+ D+D AGD  D  ST+G+I +L   PIS
Subjt:  ----------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRAN-LSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPIS

Query:  WSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLAD
        WS+KKQ  V RSSTEAEYRS+A T++++ W+  LL +L + L+ PP + CDNV A  L  NP+FH+R K I IDYHF+R +V    + V ++S+ DQLAD
Subjt:  WSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLAD

Query:  IFTKPLSSQTF
          TKPLS   F
Subjt:  IFTKPLSSQTF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-6645.02Show/hide
Query:  GSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM---------------
        G S+ Y+L+YVDDI+ITG D+  L    + L+  F + +   L YFLG+E      G+ ++Q +Y  DLLA   M +AK   TPM               
Subjt:  GSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM---------------

Query:  ----------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRAN-LSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPIS
                        FTRPD+S+AVNR+SQ+M  PT  H++ +KR+LRYL+GT   GI  ++ N LSL A+ D+D AGDT D  ST+G+I +L   PIS
Subjt:  ----------------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMFRRAN-LSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPIS

Query:  WSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLAD
        WS+KKQ  V RSSTEAEYRS+A T+++L W+  LL +L + LS PP + CDNV A  L  NP+FH+R K I +DYHF+R +V    + V ++S+ DQLAD
Subjt:  WSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLAD

Query:  IFTKPLSSQTF
          TKPLS   F
Subjt:  IFTKPLSSQTF

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.1e-4940.07Show/hide
Query:  LLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM---------------------
        +L+YVDDIII   + + +  LK+ L + F++ DLG LKYFLGLE+  ++ GI + Q KY  DLL   G+   K    PM                     
Subjt:  LLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM---------------------

Query:  ----------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMF-RRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQ
                   TR DISFAVN++SQF + P + H   V +IL Y+ GT   G+ +  +A + L  F D+        RRST+G+  FL +S ISW +KKQ
Subjt:  ----------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMF-RRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQ

Query:  STVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREK-VSRKDISVRYISSKDQLADIFTKP
          VS+SS EAEYR+L+  T ++ WL Q  R+L + LS P  L CDN +AI +A N +FH RTK IE D H VRE+ V +  +S  + +  +Q  D FT+ 
Subjt:  STVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLSAPPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREK-VSRKDISVRYISSKDQLADIFTKP

Query:  LS
        LS
Subjt:  LS

ATMG00240.1 Gag-Pol-related retrotransposon family protein7.9e-0940.26Show/hide
Query:  TRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMF-RRANLSLTAFCDSDLAGDTSDRRSTSGFIAFL
        TRPD++FAVNR+SQF           V ++L Y+ GT   G+ +   ++L L AF DSD A     RRS +GF + +
Subjt:  TRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGIMF-RRANLSLTAFCDSDLAGDTSDRRSTSGFIAFL

ATMG00810.1 DNA/RNA polymerases superfamily protein2.9e-4343.75Show/hide
Query:  YLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------
        YLLLYVDDI++TG  ++ L++L   L++ F + DLG + YFLG+++     G+F++Q KY   +L   GM   K   TP+                    
Subjt:  YLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPM--------------------

Query:  ----------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGI-MFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQ
                   TRPDIS+AVN V Q M  PT+  F ++KR+LRY+ GT   G+ + + + L++ AFCDSD AG TS RRST+GF  FL  + ISWSAK+Q
Subjt:  ----------FTRPDISFAVNRVSQFMQRPTVVHFSVVKRILRYLSGTKPFGI-MFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQ

Query:  STVSRSSTEAEYRSLATTTTDLYW
         TVSRSSTE EYR+LA T  +L W
Subjt:  STVSRSSTEAEYRSLATTTTDLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGAAGAATGGAAAAAAAAGTTGGATCTTCCTTGACCTATCTGCTTCTGTATGTCGATGATATAATTATCACTGGACCGGATTCTTCATATTTATCAATCTTGAA
GAATCACTTGGCTACTGAATTCCAAATATCAGATCTTGGTGCATTGAAATATTTTCTTGGCTTGGAAGTTCATAACACATCAGATGGTATCTTTGTTAATCAGGCTAAGT
ACCTCTCTGACTTACTTGCCACTGTAGGAATGTCCTCTGCCAAGGCATGCTTAACGCCCATGTTTACTCGCCCCGACATTTCATTTGCAGTAAATCGAGTGAGTCAGTTC
ATGCAACGACCAACTGTTGTTCATTTTTCTGTTGTTAAACGTATCTTACGATATCTCTCTGGGACTAAACCATTTGGAATTATGTTTCGACGCGCAAATTTGTCTCTCAC
TGCCTTCTGTGACTCTGATTTGGCTGGGGACACATCTGATCGCCGATCCACATCTGGATTCATTGCTTTTCTTAGCTCTAGTCCTATATCTTGGTCAGCCAAAAAGCAAT
CTACGGTCTCACGCTCATCCACTGAAGCTGAATATCGTTCTCTTGCAACTACAACAACAGATCTTTATTGGCTTCGTCAGCTCCTTCGTGATCTTCATGTCACTTTATCA
GCCCCTCCGACTTTACTATGTGACAATGTCTCAGCTATCTCTCTTGCAAATAATCCAATTTTTCACGCTCGCACAAAAATCATTGAGATTGATTATCACTTCGTTCGTGA
GAAGGTTTCTCGTAAAGACATCTCTGTTCGCTACATCTCTTCTAAAGATCAGTTGGCTGACATATTTACAAAACCTTTGTCCTCTCAGACATTTTTATTTGTCAGGGACA
AACTTTTGACTTCACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGAAGAATGGAAAAAAAAGTTGGATCTTCCTTGACCTATCTGCTTCTGTATGTCGATGATATAATTATCACTGGACCGGATTCTTCATATTTATCAATCTTGAA
GAATCACTTGGCTACTGAATTCCAAATATCAGATCTTGGTGCATTGAAATATTTTCTTGGCTTGGAAGTTCATAACACATCAGATGGTATCTTTGTTAATCAGGCTAAGT
ACCTCTCTGACTTACTTGCCACTGTAGGAATGTCCTCTGCCAAGGCATGCTTAACGCCCATGTTTACTCGCCCCGACATTTCATTTGCAGTAAATCGAGTGAGTCAGTTC
ATGCAACGACCAACTGTTGTTCATTTTTCTGTTGTTAAACGTATCTTACGATATCTCTCTGGGACTAAACCATTTGGAATTATGTTTCGACGCGCAAATTTGTCTCTCAC
TGCCTTCTGTGACTCTGATTTGGCTGGGGACACATCTGATCGCCGATCCACATCTGGATTCATTGCTTTTCTTAGCTCTAGTCCTATATCTTGGTCAGCCAAAAAGCAAT
CTACGGTCTCACGCTCATCCACTGAAGCTGAATATCGTTCTCTTGCAACTACAACAACAGATCTTTATTGGCTTCGTCAGCTCCTTCGTGATCTTCATGTCACTTTATCA
GCCCCTCCGACTTTACTATGTGACAATGTCTCAGCTATCTCTCTTGCAAATAATCCAATTTTTCACGCTCGCACAAAAATCATTGAGATTGATTATCACTTCGTTCGTGA
GAAGGTTTCTCGTAAAGACATCTCTGTTCGCTACATCTCTTCTAAAGATCAGTTGGCTGACATATTTACAAAACCTTTGTCCTCTCAGACATTTTTATTTGTCAGGGACA
AACTTTTGACTTCACTCTAG
Protein sequenceShow/hide protein sequence
MLGRMEKKVGSSLTYLLLYVDDIIITGPDSSYLSILKNHLATEFQISDLGALKYFLGLEVHNTSDGIFVNQAKYLSDLLATVGMSSAKACLTPMFTRPDISFAVNRVSQF
MQRPTVVHFSVVKRILRYLSGTKPFGIMFRRANLSLTAFCDSDLAGDTSDRRSTSGFIAFLSSSPISWSAKKQSTVSRSSTEAEYRSLATTTTDLYWLRQLLRDLHVTLS
APPTLLCDNVSAISLANNPIFHARTKIIEIDYHFVREKVSRKDISVRYISSKDQLADIFTKPLSSQTFLFVRDKLLTSL