; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039616 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039616
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box/LRR-repeat protein
Genome locationchr2:47365566..47366171
RNA-Seq ExpressionLag0039616
SyntenyLag0039616
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141790.1 F-box/FBD/LRR-repeat protein At1g16930-like [Momordica charantia]4.2e-1644.52Show/hide
Query:  QELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKL-NNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL
        +ELY+T +      W CLS    LTVLK++   + ++ G LVLP LRIL V+ L          Y+ D    +      G   LNE+TF GCPNLECL L
Subjt:  QELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKL-NNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL

Query:  IDC-LFASVCISAPKLESLELSALR--SLPFCPEVELCTPNLKRVKLSNVVPCVK
        I+     S CISAP LESLE+ A     L F P+++LCTPNLKR K  NV+P ++
Subjt:  IDC-LFASVCISAPKLESLELSALR--SLPFCPEVELCTPNLKRVKLSNVVPCVK

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]2.2e-1738.24Show/hide
Query:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL
        +ELY+ T  I  + W  CLS    LTVLK+    + ++G L LP LRILE++       +D  DY+                    + F+GCPNL+ LVL
Subjt:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL

Query:  IDCLFASVCISAPKLESLELSALRSLPFCPEVEL-CTPNLKRVKLSNVVPCVKSASDLLYIDKLTL--------ANDNYVRREKI---SQLLRFFHNAVS
        I+ LF S  I APKLE+L L +   L F  EVEL CT +L+ V  SN++P V SA +   I K+ +        + + Y  + KI   S+L R FHNA S
Subjt:  IDCLFASVCISAPKLESLELSALRSLPFCPEVEL-CTPNLKRVKLSNVVPCVKSASDLLYIDKLTL--------ANDNYVRREKI---SQLLRFFHNAVS

Query:  LTLP
          LP
Subjt:  LTLP

XP_038890212.1 F-box/FBD/LRR-repeat protein At5g56420-like [Benincasa hispida]1.4e-2447.37Show/hide
Query:  QELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVLI
        Q+L++TT +  E  WSCLS FKLLT+LKIT R +++   LVLP LRILE+KR L++  + Y  Y  D  EY   L  N D+ LNE TF+G PNLE LVL 
Subjt:  QELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVLI

Query:  DCLF--ASVCISAPKLESLELSA-LRSLPFCPEVELCTPNLKRVKLSNVVPCV--KSA--SDLLYIDKLTLA---NDNYVRREKISQLLR
        DC+   A + I APKLE+LEL A    L F  ++E   PNLK V+L N++P V  KS+  SD +YIDK++ A    D+  R   + Q+++
Subjt:  DCLF--ASVCISAPKLESLELSA-LRSLPFCPEVELCTPNLKRVKLSNVVPCV--KSA--SDLLYIDKLTLA---NDNYVRREKISQLLR

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]3.1e-2741.71Show/hide
Query:  AQELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL
        A++L + T    +  WS LS  K LT+L+I+ R  ++   LVLP LR+L     L + + D+  Y    ++Y  K     D+PLNE TF+GCPNLECL+L
Subjt:  AQELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL

Query:  IDCLFASVCISAPKLESLELS----ALRSLPFCPEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKLTLAND-NYVRR--------EKISQLLRFFHNAV
           L  S  + APKL++LEL     +  +  + PE+ LCTPNL+ V+  NV+PC+KSAS+ + + K+ +  D NY  R        E +SQLLR FHNA 
Subjt:  IDCLFASVCISAPKLESLELS----ALRSLPFCPEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKLTLAND-NYVRR--------EKISQLLRFFHNAV

Query:  SLTLPENVIRV
        S TLP N  +V
Subjt:  SLTLPENVIRV

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]5.5e-1636.76Show/hide
Query:  QELYVTTND-IGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLV
        Q+L + T D IG + W+ C S    L  LK+    ++++G L +P L+ILE++        D+  YE+D    +K +            F GCPNLE LV
Subjt:  QELYVTTND-IGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLV

Query:  LIDCLFASVCISAPKLESLELSALRSLPFC-PEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKLTL----------ANDNYVRREKISQLLRFFHNAVS
        L+D LF S  ISAPKL++L+L A   +    PEVEL TP L+ V   NV+P VKS S+   I K+ +           +     +    +LL  FHNA S
Subjt:  LIDCLFASVCISAPKLESLELSALRSLPFC-PEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKLTL----------ANDNYVRREKISQLLRFFHNAVS

Query:  LTLP
         TLP
Subjt:  LTLP

TrEMBL top hitse value%identityAlignment
A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.0e-1534.45Show/hide
Query:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL
        Q+L V T +IG + W  C      L  LK+    ++++G L LP L+ILE++   S + D+  +Y+                      F+GCPNLE LVL
Subjt:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL

Query:  IDCLFASVCISAPKLESLELSALRSLPFC-PEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKL----------TLANDNYVRREKISQLLRFFHNAVSL
        +D LF S  ISAP+LE+ +L A   +    P+VEL TP LK V   NV+P ++S S+   I K+          T  +     + K   LL   HNA S 
Subjt:  IDCLFASVCISAPKLESLELSALRSLPFC-PEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKL----------TLANDNYVRREKISQLLRFFHNAVSL

Query:  TLPENVIRV
        TLP    +V
Subjt:  TLPENVIRV

A0A5A7TCF1 F-box/LRR-repeat protein1.7e-1534.48Show/hide
Query:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL
        Q+L + T +IG + W  C      L  LK+    ++++G L LP L+ILE++   S + D+  +Y+                      F+GCPNLE LVL
Subjt:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL

Query:  IDCLFASVCISAPKLESLELSALRSLPFC-PEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKL----------TLANDNYVRREKISQLLRFFHNAVSL
        +D LF S  ISAP+LE+ +L A   +    P+VEL TP LK V   NV+P ++S S+   I K+          T  +     + K   LL   HNA S 
Subjt:  IDCLFASVCISAPKLESLELSALRSLPFC-PEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKL----------TLANDNYVRREKISQLLRFFHNAVSL

Query:  TLP
        TLP
Subjt:  TLP

A0A6J1CJ18 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g568202.1e-1339.29Show/hide
Query:  MAQELYVTTNDIGEWTWSC-LSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYID-YEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLEC
        + QEL ++T     + W C LS    L VLKI    +++ G L    LRILE++        D+ D Y++  NE               + F+GCPNLE 
Subjt:  MAQELYVTTNDIGEWTWSC-LSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYID-YEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLEC

Query:  LVLIDCLFASVCISAPKLESLELSALRSLPFCPEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKLTL
        LVL++ LF S  ISAPKLE+LEL A       P+VEL  P+LK +K  NV+P +KSAS    I K+ +
Subjt:  LVLIDCLFASVCISAPKLESLELSALRSLPFCPEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKLTL

A0A6J1CJ42 F-box/FBD/LRR-repeat protein At1g16930-like2.0e-1644.52Show/hide
Query:  QELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKL-NNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL
        +ELY+T +      W CLS    LTVLK++   + ++ G LVLP LRIL V+ L          Y+ D    +      G   LNE+TF GCPNLECL L
Subjt:  QELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKL-NNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL

Query:  IDC-LFASVCISAPKLESLELSALR--SLPFCPEVELCTPNLKRVKLSNVVPCVK
        I+     S CISAP LESLE+ A     L F P+++LCTPNLKR K  NV+P ++
Subjt:  IDC-LFASVCISAPKLESLELSALR--SLPFCPEVELCTPNLKRVKLSNVVPCVK

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like1.1e-1738.24Show/hide
Query:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL
        +ELY+ T  I  + W  CLS    LTVLK+    + ++G L LP LRILE++       +D  DY+                    + F+GCPNL+ LVL
Subjt:  QELYVTTNDIGEWTWS-CLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVL

Query:  IDCLFASVCISAPKLESLELSALRSLPFCPEVEL-CTPNLKRVKLSNVVPCVKSASDLLYIDKLTL--------ANDNYVRREKI---SQLLRFFHNAVS
        I+ LF S  I APKLE+L L +   L F  EVEL CT +L+ V  SN++P V SA +   I K+ +        + + Y  + KI   S+L R FHNA S
Subjt:  IDCLFASVCISAPKLESLELSALRSLPFCPEVEL-CTPNLKRVKLSNVVPCVKSASDLLYIDKLTL--------ANDNYVRREKI---SQLLRFFHNAVS

Query:  LTLP
          LP
Subjt:  LTLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAAGAGCTTTACGTTACAACCAACGATATAGGTGAATGGACGTGGTCGTGTTTATCGGATTTCAAACTGCTCACTGTCCTCAAGATTACACGTCGAAAGTTAAA
TAACTTCGGATTCTTGGTGTTACCTCGTTTGAGAATTTTAGAGGTTAAAAGGCTGTTATCGCATTCCTTGGATGATTACATCGACTATGAACAGGACGTCAATGAGTACC
ACAAAAAATTGAAACGCAACGGCGACCTACCATTGAATGAAAAGACATTCACAGGTTGTCCAAATTTGGAATGTTTAGTTTTAATTGATTGTCTATTCGCAAGTGTTTGT
ATTTCTGCTCCAAAACTTGAGAGCTTGGAGCTAAGTGCTCTAAGATCTCTACCATTTTGTCCGGAAGTTGAGTTGTGTACACCAAATCTGAAAAGGGTCAAGCTTAGCAA
TGTTGTACCTTGTGTGAAGTCTGCTTCTGACTTACTGTACATAGACAAGCTAACCTTAGCAAATGATAACTATGTAAGAAGGGAAAAGATCTCTCAACTGCTCAGATTTT
TTCATAATGCAGTGTCTCTTACGCTGCCTGAAAATGTAATACGGGTATCCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAAGAGCTTTACGTTACAACCAACGATATAGGTGAATGGACGTGGTCGTGTTTATCGGATTTCAAACTGCTCACTGTCCTCAAGATTACACGTCGAAAGTTAAA
TAACTTCGGATTCTTGGTGTTACCTCGTTTGAGAATTTTAGAGGTTAAAAGGCTGTTATCGCATTCCTTGGATGATTACATCGACTATGAACAGGACGTCAATGAGTACC
ACAAAAAATTGAAACGCAACGGCGACCTACCATTGAATGAAAAGACATTCACAGGTTGTCCAAATTTGGAATGTTTAGTTTTAATTGATTGTCTATTCGCAAGTGTTTGT
ATTTCTGCTCCAAAACTTGAGAGCTTGGAGCTAAGTGCTCTAAGATCTCTACCATTTTGTCCGGAAGTTGAGTTGTGTACACCAAATCTGAAAAGGGTCAAGCTTAGCAA
TGTTGTACCTTGTGTGAAGTCTGCTTCTGACTTACTGTACATAGACAAGCTAACCTTAGCAAATGATAACTATGTAAGAAGGGAAAAGATCTCTCAACTGCTCAGATTTT
TTCATAATGCAGTGTCTCTTACGCTGCCTGAAAATGTAATACGGGTATCCATCTAA
Protein sequenceShow/hide protein sequence
MAQELYVTTNDIGEWTWSCLSDFKLLTVLKITRRKLNNFGFLVLPRLRILEVKRLLSHSLDDYIDYEQDVNEYHKKLKRNGDLPLNEKTFTGCPNLECLVLIDCLFASVC
ISAPKLESLELSALRSLPFCPEVELCTPNLKRVKLSNVVPCVKSASDLLYIDKLTLANDNYVRREKISQLLRFFHNAVSLTLPENVIRVSI