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Lag0039635 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039635
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:47665885..47667205
RNA-Seq ExpressionLag0039635
SyntenyLag0039635
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021753633.1 uncharacterized protein LOC110719026 [Chenopodium quinoa]6.1e-0632.2Show/hide
Query:  VGAMECW---VVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISLEVESDSMEVVSILSGSDLDLSELKVLTYVVVKMASKLERVS
        VG + C    VV D +G  +  G  Q+   W ++  +A+AI  G+R+     V++   L VESD ++V+  L     DLSEL ++   ++ + S  + V 
Subjt:  VGAMECW---VVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISLEVESDSMEVVSILSGSDLDLSELKVLTYVVVKMASKLERVS

Query:  FSHCRRSANSVAHCFAKF
        +S+ +R  N VAH +A F
Subjt:  FSHCRRSANSVAHCFAKF

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.4e-0556.82Show/hide
Query:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILT
        WRSI WGRDLF KG+RW VGN   I +  DPW+ R G   P+ T
Subjt:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILT

XP_030495270.1 uncharacterized protein LOC115711072 [Cannabis sativa]7.9e-0625.31Show/hide
Query:  MTWRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILTIDQLKGQKSAY----------HLTIEINSHKQGSQSDTTRQSRFGKASGAQR--
        +TW+SI WG++L  KG R+ +G+   +   KDPWI      KPI  ID++     AY          H    I S K G    TT + +   ++  ++  
Subjt:  MTWRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILTIDQLKGQKSAY----------HLTIEINSHKQGSQSDTTRQSRFGKASGAQR--

Query:  KEWRSMDYWSWLVDNLSKDELGQRFDYHVGAMECWVVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISL-EVESDSMEVVSILSG
          WR      + ++  +   L Q+    +GA    ++ D  G+ +      V   +    ++A+A+   +  +     Q++  L  +E+D+  V + L+ 
Subjt:  KEWRSMDYWSWLVDNLSKDELGQRFDYHVGAMECWVVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISL-EVESDSMEVVSILSG

Query:  SDLDLSELKVLTYVVVKMASKLERVSFSHCRRSANSVAHCFAKFA
         + DLS    L   +  + S   +V  +H +R+AN  AH  AK+A
Subjt:  SDLDLSELKVLTYVVVKMASKLERVSFSHCRRSANSVAHCFAKFA

XP_030497957.1 uncharacterized protein LOC115713607 [Cannabis sativa]5.7e-0452.78Show/hide
Query:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRR
        W+ + WGRDL  KG+RWCVG+   I I++DPW+ R+
Subjt:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRR

XP_030959169.1 uncharacterized protein LOC115981127 [Quercus lobata]2.0e-0434.02Show/hide
Query:  QVHQQWAIKSLKARAILEGIRMIYDTCVQNKISLEVESDSMEVVSILSGSDLDLSELKVLTYVVVKMASKLERVSFSHCRRSANSVAHCFAKFACNF
        +++Q + +  +KA A L+ ++  ++   QN I   +E DS+ ++  L   D +LS L +L   V   A+   R+S+SH +RS NSVAH   K+A +F
Subjt:  QVHQQWAIKSLKARAILEGIRMIYDTCVQNKISLEVESDSMEVVSILSGSDLDLSELKVLTYVVVKMASKLERVSFSHCRRSANSVAHCFAKFACNF

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224236.6e-0656.82Show/hide
Query:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILT
        WRSI WGRDLF KG+RW VGN   I +  DPW+ R G   P+ T
Subjt:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILT

A0A803MUM1 Uncharacterized protein2.1e-0433.96Show/hide
Query:  VVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISLEVESDSMEVVSILSGSDLDLSELKVLTYVVVKMASKLERVSFSHCRRSANS
        VV D +G  +  G  QVHQ W    ++A+A++ G+++     V+  I   VESD   +V +++G   D S L +L   +  +A   + + F+H  R ANS
Subjt:  VVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISLEVESDSMEVVSILSGSDLDLSELKVLTYVVVKMASKLERVSFSHCRRSANS

Query:  VAHCFA
        VAH  A
Subjt:  VAHCFA

A0A803P6S5 Uncharacterized protein1.1e-0524.79Show/hide
Query:  MTWRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILTIDQLKGQKSAYHLTIEINSHKQGSQ-----SDTTRQSRFGKASGAQRKEWRSMD
        +TW+SI WG++L  KG R+ +G+   +   KDPWI      KPI  ID++     AY    + N    G Q     +     +RF +     + +    +
Subjt:  MTWRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILTIDQLKGQKSAYHLTIEINSHKQGSQ-----SDTTRQSRFGKASGAQRKEWRSMD

Query:  YWSWLVDNLSKDELGQRFDYHVGAMECWVVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISL-EVESDSMEVVSILSGSDLDLSE
                L + +LG      +GA    ++ D  G+ +      V   +    ++A+A+   +  +     Q++  L  +E+D+  V + L+  + DLS 
Subjt:  YWSWLVDNLSKDELGQRFDYHVGAMECWVVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISL-EVESDSMEVVSILSGSDLDLSE

Query:  LKVLTYVVVKMASKLERVSFSHCRRSANSVAHCFAKFA
           L   +  + S   +V  +H +R+AN  AH  AK+A
Subjt:  LKVLTYVVVKMASKLERVSFSHCRRSANSVAHCFAKFA

A0A803PDB4 Uncharacterized protein2.8e-0452.78Show/hide
Query:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRR
        W+ + WGRDL  KG+RWCVG+   I I++DPW+ R+
Subjt:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRR

A0A803PEX7 Uncharacterized protein3.3e-0558.33Show/hide
Query:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRR
        W+ I WGRDL AKG+RWCVGN   I +++DPW+ R+
Subjt:  WRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGGAGGAGCATATCCTGGGGCAGAGACCTTTTTGCTAAAGGTTTCAGATGGTGTGTGGGAAACATAAACTTAATCACGATAGACAAGGATCCTTGGATTAATAG
GAGGGGTTTGCGAAAACCAATCCTTACCATAGACCAACTCAAAGGGCAAAAGAGCGCTTATCACCTAACCATAGAGATCAACTCCCACAAGCAAGGCTCCCAGTCGGACA
CAACAAGGCAATCAAGATTTGGAAAAGCGTCTGGAGCTCAAAGGAAAGAGTGGAGGTCGATGGATTATTGGAGCTGGTTGGTGGATAATCTAAGCAAGGACGAGCTTGGC
CAAAGGTTTGATTATCATGTGGGAGCTATGGAATGTTGGGTGGTGCATGACTCGATAGGATCCTCAATCTGTTTTGGATGGCTCCAAGTTCACCAACAATGGGCAATCAA
ATCTCTGAAAGCCAGGGCCATTTTAGAGGGGATTAGAATGATCTACGATACCTGTGTGCAAAACAAAATTTCGCTGGAGGTAGAGTCAGATTCTATGGAAGTTGTTTCGA
TTCTTTCTGGATCGGATCTTGATCTGTCTGAGTTGAAAGTTCTCACATATGTTGTCGTCAAGATGGCTTCAAAGCTGGAAAGAGTCTCGTTCAGCCATTGCAGGAGGTCT
GCAAACTCAGTTGCCCACTGCTTTGCTAAATTTGCTTGTAATTTTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTGGAGGAGCATATCCTGGGGCAGAGACCTTTTTGCTAAAGGTTTCAGATGGTGTGTGGGAAACATAAACTTAATCACGATAGACAAGGATCCTTGGATTAATAG
GAGGGGTTTGCGAAAACCAATCCTTACCATAGACCAACTCAAAGGGCAAAAGAGCGCTTATCACCTAACCATAGAGATCAACTCCCACAAGCAAGGCTCCCAGTCGGACA
CAACAAGGCAATCAAGATTTGGAAAAGCGTCTGGAGCTCAAAGGAAAGAGTGGAGGTCGATGGATTATTGGAGCTGGTTGGTGGATAATCTAAGCAAGGACGAGCTTGGC
CAAAGGTTTGATTATCATGTGGGAGCTATGGAATGTTGGGTGGTGCATGACTCGATAGGATCCTCAATCTGTTTTGGATGGCTCCAAGTTCACCAACAATGGGCAATCAA
ATCTCTGAAAGCCAGGGCCATTTTAGAGGGGATTAGAATGATCTACGATACCTGTGTGCAAAACAAAATTTCGCTGGAGGTAGAGTCAGATTCTATGGAAGTTGTTTCGA
TTCTTTCTGGATCGGATCTTGATCTGTCTGAGTTGAAAGTTCTCACATATGTTGTCGTCAAGATGGCTTCAAAGCTGGAAAGAGTCTCGTTCAGCCATTGCAGGAGGTCT
GCAAACTCAGTTGCCCACTGCTTTGCTAAATTTGCTTGTAATTTTGGGTAG
Protein sequenceShow/hide protein sequence
MTWRSISWGRDLFAKGFRWCVGNINLITIDKDPWINRRGLRKPILTIDQLKGQKSAYHLTIEINSHKQGSQSDTTRQSRFGKASGAQRKEWRSMDYWSWLVDNLSKDELG
QRFDYHVGAMECWVVHDSIGSSICFGWLQVHQQWAIKSLKARAILEGIRMIYDTCVQNKISLEVESDSMEVVSILSGSDLDLSELKVLTYVVVKMASKLERVSFSHCRRS
ANSVAHCFAKFACNFG