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Lag0039648 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039648
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box/LRR-repeat protein At3g26922-like isoform X2
Genome locationchr2:47778604..47780454
RNA-Seq ExpressionLag0039648
SyntenyLag0039648
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]4.7e-0543.37Show/hide
Query:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML
        D   TQ+L   F  LL V HNA SFTLP KA +V+    SS    SFHN+R+L+LKT+ ++ +       L + LK P LE +
Subjt:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML

XP_008459618.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]4.7e-0543.37Show/hide
Query:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML
        D   TQ+L   F  LL V HNA SFTLP KA +V+    SS    SFHN+R+L+LKT+ ++ +       L + LK P LE +
Subjt:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]9.8e-1145.36Show/hide
Query:  QKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPIS--RLMNSLKCPNLEMLDFEVDPNQVVSLLSLRL
        QK+ E+ SQLL+VFHNA SFTLP  A +V+   P SL+GCSFHNLR+L+ +T  + ++I  P+S     N + CPNL    + V    + + LS +L
Subjt:  QKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPIS--RLMNSLKCPNLEMLDFEVDPNQVVSLLSLRL

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]5.2e-0444.16Show/hide
Query:  TQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLE
        TQKL  +F +LL VFHNARSFTLP KA  V+    S      FHN+ +L+LKT+ +  +       L + LK P L+
Subjt:  TQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLE

TrEMBL top hitse value%identityAlignment
A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X12.3e-0543.37Show/hide
Query:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML
        D   TQ+L   F  LL V HNA SFTLP KA +V+    SS    SFHN+R+L+LKT+ ++ +       L + LK P LE +
Subjt:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X22.3e-0543.37Show/hide
Query:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML
        D   TQ+L   F  LL V HNA SFTLP KA +V+    SS    SFHN+R+L+LKT+ ++ +       L + LK P LE +
Subjt:  DEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGTGTGGAGTCGGAGCTGTTGGACACGTCGGAGTCGTTGGAGTCGTCGGAGCCGAGGGAGGAGAAGACGAAGTGGCTACGCAAAAGTTGACAGAGGATTTCTC
TCAGTTGCTTCAAGTGTTTCATAATGCAAGGTCTTTCACACTGCCTTTTAAGGCAATGGAGGTGCTATTGTCAGTTCCTTCTTCTCTTAGTGGATGTTCTTTTCATAATT
TGAGATATTTGAAGTTGAAAACAGAGGCAACCAACAAAATAATAAGCTTGCCTATCAGTAGATTGATGAATTCACTAAAATGCCCGAATTTAGAAATGTTGGACTTCGAG
GTTGATCCCAACCAGGTAGTCTCTTTACTTTCTCTACGACTGATCACAAACAATTCTCAATCGCTTCCACCTAAGTATCCATCCTCCTCCCTTTGTGCATGCCCCATGGA
TGTTGCTCTTATACCAAATGATGGGTCTTTGGCAGGCCCTTATTGTGAATGCATACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGTGTGGAGTCGGAGCTGTTGGACACGTCGGAGTCGTTGGAGTCGTCGGAGCCGAGGGAGGAGAAGACGAAGTGGCTACGCAAAAGTTGACAGAGGATTTCTC
TCAGTTGCTTCAAGTGTTTCATAATGCAAGGTCTTTCACACTGCCTTTTAAGGCAATGGAGGTGCTATTGTCAGTTCCTTCTTCTCTTAGTGGATGTTCTTTTCATAATT
TGAGATATTTGAAGTTGAAAACAGAGGCAACCAACAAAATAATAAGCTTGCCTATCAGTAGATTGATGAATTCACTAAAATGCCCGAATTTAGAAATGTTGGACTTCGAG
GTTGATCCCAACCAGGTAGTCTCTTTACTTTCTCTACGACTGATCACAAACAATTCTCAATCGCTTCCACCTAAGTATCCATCCTCCTCCCTTTGTGCATGCCCCATGGA
TGTTGCTCTTATACCAAATGATGGGTCTTTGGCAGGCCCTTATTGTGAATGCATACTCTAG
Protein sequenceShow/hide protein sequence
MKRCGVGAVGHVGVVGVVGAEGGEDEVATQKLTEDFSQLLQVFHNARSFTLPFKAMEVLLSVPSSLSGCSFHNLRYLKLKTEATNKIISLPISRLMNSLKCPNLEMLDFE
VDPNQVVSLLSLRLITNNSQSLPPKYPSSSLCACPMDVALIPNDGSLAGPYCECIL