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Lag0039675 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039675
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr2:48162468..48162809
RNA-Seq ExpressionLag0039675
SyntenyLag0039675
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060627.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]1.4e-1649.48Show/hide
Query:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE
        TNFS+PPLNQLLNQ++S+KLDRGN+LLWK LALPI++SY+ EGHL+G  PCPPK++      +       A     EA    +S S     +NP ++
Subjt:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE

KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]1.2e-1547.47Show/hide
Query:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGE--INPTYE
        T+F++PPLNQ+LNQ+T+IKLDR N+LLWK LALPIL+ Y+LEGHL+G KPCP K+V   ++       +  G    +    Q + S++     INP +E
Subjt:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGE--INPTYE

TYK02246.1 uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]1.4e-1649.48Show/hide
Query:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE
        TNFS+PPLNQLLNQ++S+KLDRGN+LLWK LALPI++SY+ EGHL+G  PCPPK++      +       A     EA    +S S     +NP ++
Subjt:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.3e-1756.31Show/hide
Query:  APVSGTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPT
        A VSG  F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSY+L  +L+G KPCPP ++     V   +P++  G  +     SQ+S +     +NPT
Subjt:  APVSGTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPT

Query:  YEA
        YEA
Subjt:  YEA

XP_038882253.1 uncharacterized protein LOC120073479 [Benincasa hispida]3.1e-1654.17Show/hide
Query:  FSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYEA
        FS+PPLNQLLNQITSIKL+RG F+LWK L+LPIL+ YRLEGHLS +K CP  ++ + ++VA P      G V+++A     S S  +  +NP YEA
Subjt:  FSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYEA

TrEMBL top hitse value%identityAlignment
A0A1S4DZ26 uncharacterized protein LOC1079912027.5e-1648.48Show/hide
Query:  SGTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE
        S TNFS+PPLNQLLNQ++S+KLDR N+LLWK LALPI++SY+ EG+L+G  PCPPK++    A +       A     EA    +S S     +NP ++
Subjt:  SGTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE

A0A5A7V1E0 Reverse transcriptase, RNA-dependent DNA polymerase6.7e-1749.48Show/hide
Query:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE
        TNFS+PPLNQLLNQ++S+KLDRGN+LLWK LALPI++SY+ EGHL+G  PCPPK++      +       A     EA    +S S     +NP ++
Subjt:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase5.7e-1647.47Show/hide
Query:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGE--INPTYE
        T+F++PPLNQ+LNQ+T+IKLDR N+LLWK LALPIL+ Y+LEGHL+G KPCP K+V   ++       +  G    +    Q + S++     INP +E
Subjt:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGE--INPTYE

A0A5D3BVJ1 Uncharacterized protein6.7e-1749.48Show/hide
Query:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE
        TNFS+PPLNQLLNQ++S+KLDRGN+LLWK LALPI++SY+ EGHL+G  PCPPK++      +       A     EA    +S S     +NP ++
Subjt:  TNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPTYE

A0A6J1DCW4 uncharacterized protein LOC1110195986.1e-1856.31Show/hide
Query:  APVSGTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPT
        A VSG  F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSY+L  +L+G KPCPP ++     V   +P++  G  +     SQ+S +     +NPT
Subjt:  APVSGTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPT

Query:  YEA
        YEA
Subjt:  YEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCGTCAATTCCTCCGGTAATTCAGCCCCAGTCTCCGGCACTAATTTTAGCAGTCCACCGTTGAATCAGCTTCTCAACCAAATCACCTCTATAAAACTTGATAG
AGGTAATTTTCTTCTCTGGAAAAATCTTGCGTTACCGATTCTTCGAAGTTATCGATTGGAAGGACATCTGTCTGGCTCTAAGCCATGTCCTCCAAAGTATGTCCAAGCTC
CAGCTGCTGTAGCAGATCCCTCGCCATCGTCTGGTGCAGGAGGCGTGAACACAGAAGCAGTGGTTAGTCAAGCCTCTGTTTCGGCCTTAGTTGGAGAAATTAATCCAACA
TATGAAGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGCGTCAATTCCTCCGGTAATTCAGCCCCAGTCTCCGGCACTAATTTTAGCAGTCCACCGTTGAATCAGCTTCTCAACCAAATCACCTCTATAAAACTTGATAG
AGGTAATTTTCTTCTCTGGAAAAATCTTGCGTTACCGATTCTTCGAAGTTATCGATTGGAAGGACATCTGTCTGGCTCTAAGCCATGTCCTCCAAAGTATGTCCAAGCTC
CAGCTGCTGTAGCAGATCCCTCGCCATCGTCTGGTGCAGGAGGCGTGAACACAGAAGCAGTGGTTAGTCAAGCCTCTGTTTCGGCCTTAGTTGGAGAAATTAATCCAACA
TATGAAGCGTGA
Protein sequenceShow/hide protein sequence
MTSVNSSGNSAPVSGTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYRLEGHLSGSKPCPPKYVQAPAAVADPSPSSGAGGVNTEAVVSQASVSALVGEINPT
YEA