; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039681 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039681
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:48316805..48318548
RNA-Seq ExpressionLag0039681
SyntenyLag0039681
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEZ42778.1 hypothetical protein [Tanacetum cinerariifolium]1.3e-0832.09Show/hide
Query:  VHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDV---------------VVNDKINMGLEQDTQ-DDDIDKTGELVPDSSLDSISFDLG
        VH   L++++  +++K +I   +KYP+   S++ I+V+DS+VQ V                +++K+N  L+ ++   + I +   L P   ++ I   LG
Subjt:  VHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDV---------------VVNDKINMGLEQDTQ-DDDIDKTGELVPDSSLDSISFDLG

Query:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRK
        + + + ++L SI+Q PKLELK LP+HLKY +LR+
Subjt:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRK

XP_010246599.1 PREDICTED: uncharacterized protein LOC104589861 [Nelumbo nucifera]5.4e-1036.22Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ---DDDIDKTGELVPDSSLDS--ISFDLGISVTSGEML
        ++V    LS+E+  EIVK +I + +KYP+   S+  +++VDS+VQ++   + +N  L+   Q   ++++D + E  P+  L+    + ++  S +  ++L
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ---DDDIDKTGELVPDSSLDS--ISFDLGISVTSGEML

Query:  PSIMQTPKLELKALPEHLKYTYLRKKQ
        PSI+Q PKLELK LP+HLKY YL  K+
Subjt:  PSIMQTPKLELKALPEHLKYTYLRKKQ

XP_019198426.1 PREDICTED: uncharacterized protein LOC109192308 [Ipomoea nil]1.4e-1039.52Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDV----VVNDKINMGLEQDTQDDDIDKTGELVPD--SSLDSISFDLGISVTSGEM
        ++V + +LS+E+  EI K +I   +KYPD   SLY ++V+DS+VQDV       +  ++  E D  D+ +D + E++    S L+S + D   S+T  ++
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDV----VVNDKINMGLEQDTQDDDIDKTGELVPD--SSLDSISFDLGISVTSGEM

Query:  LPSIMQTPKLELKALPEHLKYTYL
        LPS+++ P LELK LP+HLKY YL
Subjt:  LPSIMQTPKLELKALPEHLKYTYL

XP_022159045.1 uncharacterized protein LOC111025486 [Momordica charantia]1.5e-1242.28Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ-----DDDIDKTGELVPDSSLDSISFDLGISVTSGEML
        ++V    LS+E+  EIVK +I   +KYP+   SL QI+++DS+VQD    D  +   + D Q     +D+IDK            ++FD  IS T+ +++
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ-----DDDIDKTGELVPDSSLDSISFDLGISVTSGEML

Query:  PSIMQTPKLELKALPEHLKYTYL
        PSI+Q PKLELKALP+HLKY YL
Subjt:  PSIMQTPKLELKALPEHLKYTYL

XP_031402644.1 uncharacterized protein LOC116212216 [Punica granatum]2.3e-0836.76Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG
        ++VH   LSLE+  E +  +I   +++PDT  S+  ++V+DS V+DV     V D+++  ++Q    D Q ++D      + P  SL  +S  F+   L 
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG

Query:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ
        +  ++  +LPSI+Q PKLELK LPE+LKY YL +K+
Subjt:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ

TrEMBL top hitse value%identityAlignment
A0A1U7Z3A1 uncharacterized protein LOC1045898612.6e-1036.22Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ---DDDIDKTGELVPDSSLDS--ISFDLGISVTSGEML
        ++V    LS+E+  EIVK +I + +KYP+   S+  +++VDS+VQ++   + +N  L+   Q   ++++D + E  P+  L+    + ++  S +  ++L
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ---DDDIDKTGELVPDSSLDS--ISFDLGISVTSGEML

Query:  PSIMQTPKLELKALPEHLKYTYLRKKQ
        PSI+Q PKLELK LP+HLKY YL  K+
Subjt:  PSIMQTPKLELKALPEHLKYTYLRKKQ

A0A6J1DXI8 uncharacterized protein LOC1110254867.4e-1342.28Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ-----DDDIDKTGELVPDSSLDSISFDLGISVTSGEML
        ++V    LS+E+  EIVK +I   +KYP+   SL QI+++DS+VQD    D  +   + D Q     +D+IDK            ++FD  IS T+ +++
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQ-----DDDIDKTGELVPDSSLDSISFDLGISVTSGEML

Query:  PSIMQTPKLELKALPEHLKYTYL
        PSI+Q PKLELKALP+HLKY YL
Subjt:  PSIMQTPKLELKALPEHLKYTYL

A0A6P8D4X0 Reverse transcriptase2.5e-0836.03Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG
        ++VH   LSLE+  E +  +I   +++PDT  S+  ++V+DS V+DV     V ++++  ++Q    D Q ++D      + P  SL  +S  F+   L 
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG

Query:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ
        +  ++  +LPSI+Q PKLELK LPE+LKY YL +K+
Subjt:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ

A0A6P8DJV3 Reverse transcriptase2.5e-0836.03Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG
        ++VH   LSLE+  E +  +I   +++PDT  S+  ++V+DS V+DV     V ++++  ++Q    D Q ++D      + P  SL  +S  F+   L 
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG

Query:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ
        +  ++  +LPSI+Q PKLELK LPE+LKY YL +K+
Subjt:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ

A0A6P8E7Z7 uncharacterized protein LOC1162122161.1e-0836.76Show/hide
Query:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG
        ++VH   LSLE+  E +  +I   +++PDT  S+  ++V+DS V+DV     V D+++  ++Q    D Q ++D      + P  SL  +S  F+   L 
Subjt:  MNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVV----VNDKINMGLEQ----DTQ-DDDIDKTGELVPDSSLDSIS--FD---LG

Query:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ
        +  ++  +LPSI+Q PKLELK LPE+LKY YL +K+
Subjt:  ISVTSGEMLPSIMQTPKLELKALPEHLKYTYLRKKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAATGTTCATAGGAATGTATTGTCTTTAGAGTATCGGGACGAGATTGTTAAAGTTAGTATACCTAAGGTTGTTAAGTATCCTGATACTTCTGCTTCCCTTTACCA
AATTGAGGTAGTTGATTCTGTAGTGCAGGATGTTGTTGTTAATGATAAAATTAACATGGGTCTTGAACAGGATACCCAAGATGATGATATTGATAAGACAGGGGAGTTGG
TTCCTGATTCTTCCCTTGATTCTATTTCTTTTGATCTTGGTATTTCTGTTACTTCTGGTGAAATGCTACCCTCTATTATGCAAACACCCAAATTGGAGTTGAAAGCATTA
CCTGAGCACCTCAAATACACATATCTAAGAAAAAAACAGTATGATCATAGTAGGGACACTACCACCGAGATCTTACACTGTTATATCTCTGAACTAGGAACCAGATCTGG
GCGTTTTCAGGCGTTCTCCGGTGGCATGGGACCCACGACGTCTCTAGGCGTTCTTCGACGAGCACGGGACCCACGACGGCGACATCACAACAGCAGTTTGGAGGGGGGTT
TTGCCTTGTTTCACGGTGGGTTTTCTTTCTTATTCGAGCTGCCCTCCCTCACACGATCTCTCTCCCTATCTTTCTGTTTTCCCTATCTCAATTTTGAGGGCACAACTGCA
CTCCCTCCCGTCGTTGGCGTTGGAAAGGAAGGAGGAGGTCTCTTCGCTCTCCCTCCTTTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAATGTTCATAGGAATGTATTGTCTTTAGAGTATCGGGACGAGATTGTTAAAGTTAGTATACCTAAGGTTGTTAAGTATCCTGATACTTCTGCTTCCCTTTACCA
AATTGAGGTAGTTGATTCTGTAGTGCAGGATGTTGTTGTTAATGATAAAATTAACATGGGTCTTGAACAGGATACCCAAGATGATGATATTGATAAGACAGGGGAGTTGG
TTCCTGATTCTTCCCTTGATTCTATTTCTTTTGATCTTGGTATTTCTGTTACTTCTGGTGAAATGCTACCCTCTATTATGCAAACACCCAAATTGGAGTTGAAAGCATTA
CCTGAGCACCTCAAATACACATATCTAAGAAAAAAACAGTATGATCATAGTAGGGACACTACCACCGAGATCTTACACTGTTATATCTCTGAACTAGGAACCAGATCTGG
GCGTTTTCAGGCGTTCTCCGGTGGCATGGGACCCACGACGTCTCTAGGCGTTCTTCGACGAGCACGGGACCCACGACGGCGACATCACAACAGCAGTTTGGAGGGGGGTT
TTGCCTTGTTTCACGGTGGGTTTTCTTTCTTATTCGAGCTGCCCTCCCTCACACGATCTCTCTCCCTATCTTTCTGTTTTCCCTATCTCAATTTTGAGGGCACAACTGCA
CTCCCTCCCGTCGTTGGCGTTGGAAAGGAAGGAGGAGGTCTCTTCGCTCTCCCTCCTTTTAATTAA
Protein sequenceShow/hide protein sequence
MMNVHRNVLSLEYRDEIVKVSIPKVVKYPDTSASLYQIEVVDSVVQDVVVNDKINMGLEQDTQDDDIDKTGELVPDSSLDSISFDLGISVTSGEMLPSIMQTPKLELKAL
PEHLKYTYLRKKQYDHSRDTTTEILHCYISELGTRSGRFQAFSGGMGPTTSLGVLRRARDPRRRHHNSSLEGGFALFHGGFSFLFELPSLTRSLSLSFCFPYLNFEGTTA
LPPVVGVGKEGGGLFALPPFN