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Lag0039691 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039691
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:48440293..48441908
RNA-Seq ExpressionLag0039691
SyntenyLag0039691
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG55646.1 hypothetical protein EZV62_020902 [Acer yangbiense]9.9e-0625.97Show/hide
Query:  LEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNK-------------MQLSGGNQTILDRIKIMGKLTAMRGE---
        L++EY+PIV +IE ++   W E+Y TLL++++ L  +N V+     +   +A+   NK               L+ G     +R    G     RG    
Subjt:  LEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNK-------------MQLSGGNQTILDRIKIMGKLTAMRGE---

Query:  --------EVVEDILHIEVMC----PNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMKLN
                +V     H   +C     + ++  V   ++     ++ +VATPE +   +W  DSGAT+H+  D  NL++K N
Subjt:  --------EVVEDILHIEVMC----PNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMKLN

XP_022142770.1 uncharacterized protein LOC111012809 [Momordica charantia]1.6e-1129.28Show/hide
Query:  LSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNKMQLSGGNQTILDRIKIMGKLTAMRGE----
        LS+VLT      L AEYL I+  I  K+ + W E+++TL+TFEN L+ LN  N     V   +ANY YNK      N     + +  G+ +  R      
Subjt:  LSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNKMQLSGGNQTILDRIKIMGKLTAMRGE----

Query:  ------------EVVEDILHIEVMCPNQ-HVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNM----------------KLNI-
                    +V   I H+ V+C ++ +++++ N          AY+  PEVI  P+WL+DSGAT+H   D  NL                  KL I 
Subjt:  ------------EVVEDILHIEVMCPNQ-HVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNM----------------KLNI-

Query:  ------------VDKATRKVILQGILKDRLYQLKLTLLGPQLIHRSNVSLSSTSCLESTSHLS
                    +DK T +++L+G L   LYQL L      L  + +  + +   ++ST H++
Subjt:  ------------VDKATRKVILQGILKDRLYQLKLTLLGPQLIHRSNVSLSSTSCLESTSHLS

XP_022143631.1 uncharacterized protein LOC111013491 [Momordica charantia]4.5e-0650Show/hide
Query:  VATPEVITYPSWLVDSGATSHIIADLENLNMKLNIVDKATRKVILQGILKDRLYQL
        +ATPE +   +W +D+GA+SH+ +D+ NL++K +I DK T KV+L+G+LKD LYQ+
Subjt:  VATPEVITYPSWLVDSGATSHIIADLENLNMKLNIVDKATRKVILQGILKDRLYQL

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]5.6e-1733.85Show/hide
Query:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------
        +F++ +S VL+      LEAEYLPIV  IEGKD   W EL++TL+TFEN L+ LN+V+  +   + + + NY ++K    G  Q                
Subjt:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------

Query:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK
                R +  G+ +  RG       ++     HI  +C  +  +   NL +       AY+A PE++  PSWL DSGAT H+ +DL NLN+K
Subjt:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]5.6e-1733.85Show/hide
Query:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------
        +F++ +S VL+      LEAEYLPIV  IEGKD   W EL++TL+TFEN L+ LN+V+  +   + + + NY ++K    G  Q                
Subjt:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------

Query:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK
                R +  G+ +  RG       ++     HI  +C  +  +   NL +       AY+A PE++  PSWL DSGAT H+ +DL NLN+K
Subjt:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK

TrEMBL top hitse value%identityAlignment
A0A5C7HHE9 Uncharacterized protein4.8e-0625.97Show/hide
Query:  LEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNK-------------MQLSGGNQTILDRIKIMGKLTAMRGE---
        L++EY+PIV +IE ++   W E+Y TLL++++ L  +N V+     +   +A+   NK               L+ G     +R    G     RG    
Subjt:  LEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNK-------------MQLSGGNQTILDRIKIMGKLTAMRGE---

Query:  --------EVVEDILHIEVMC----PNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMKLN
                +V     H   +C     + ++  V   ++     ++ +VATPE +   +W  DSGAT+H+  D  NL++K N
Subjt:  --------EVVEDILHIEVMC----PNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMKLN

A0A6J1CLV9 uncharacterized protein LOC1110128097.7e-1229.28Show/hide
Query:  LSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNKMQLSGGNQTILDRIKIMGKLTAMRGE----
        LS+VLT      L AEYL I+  I  K+ + W E+++TL+TFEN L+ LN  N     V   +ANY YNK      N     + +  G+ +  R      
Subjt:  LSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNKMQLSGGNQTILDRIKIMGKLTAMRGE----

Query:  ------------EVVEDILHIEVMCPNQ-HVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNM----------------KLNI-
                    +V   I H+ V+C ++ +++++ N          AY+  PEVI  P+WL+DSGAT+H   D  NL                  KL I 
Subjt:  ------------EVVEDILHIEVMCPNQ-HVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNM----------------KLNI-

Query:  ------------VDKATRKVILQGILKDRLYQLKLTLLGPQLIHRSNVSLSSTSCLESTSHLS
                    +DK T +++L+G L   LYQL L      L  + +  + +   ++ST H++
Subjt:  ------------VDKATRKVILQGILKDRLYQLKLTLLGPQLIHRSNVSLSSTSCLESTSHLS

A0A6J1CQV1 uncharacterized protein LOC1110134912.2e-0650Show/hide
Query:  VATPEVITYPSWLVDSGATSHIIADLENLNMKLNIVDKATRKVILQGILKDRLYQL
        +ATPE +   +W +D+GA+SH+ +D+ NL++K +I DK T KV+L+G+LKD LYQ+
Subjt:  VATPEVITYPSWLVDSGATSHIIADLENLNMKLNIVDKATRKVILQGILKDRLYQL

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X22.7e-1733.85Show/hide
Query:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------
        +F++ +S VL+      LEAEYLPIV  IEGKD   W EL++TL+TFEN L+ LN+V+  +   + + + NY ++K    G  Q                
Subjt:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------

Query:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK
                R +  G+ +  RG       ++     HI  +C  +  +   NL +       AY+A PE++  PSWL DSGAT H+ +DL NLN+K
Subjt:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X12.7e-1733.85Show/hide
Query:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------
        +F++ +S VL+      LEAEYLPIV  IEGKD   W EL++TL+TFEN L+ LN+V+  +   + + + NY ++K    G  Q                
Subjt:  SFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSG-SVGEATANYGYNKMQLSGGNQTILD------------

Query:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK
                R +  G+ +  RG       ++     HI  +C  +  +   NL +       AY+A PE++  PSWL DSGAT H+ +DL NLN+K
Subjt:  --------RIKIMGKLTAMRGE------EVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGATGGTAATGAAGAACAGTCTTCCCTATCTCAAACTCAAGTATCTCTTTCTGCTATAACACTTCCCACTGCAAATCCATCAACTAATCCTTCCTTTGACCA
TCCATTAAGTACCGTCCTTACTGTCAAACTTGATGATAGATTGGAGGCAGAGTATTTACCAATTGTCAGCATTATTGAAGGCAAGGATGGCGTCCCTTGGCATGAACTCT
ATTCTACACTTCTTACTTTTGAGAATAACTTGGTGTGGTTGAATGTTGTTAATCCTCCAAGTGGAAGTGTTGGAGAAGCTACAGCCAATTATGGCTACAACAAAATGCAA
CTTTCTGGTGGTAACCAAACAATACTGGACAGAATAAAAATTATGGGAAAACTAACCGCAATGAGAGGGGAAGAGGTCGTGGAAGATATTCTCCATATCGAGGTAATGTG
TCCAAACCAACATGTCAAGTTTGTGGAAAATTTGGACACTCTACTGCTATTTGTTACCATAGCCTATGTAGCAACTCCTGAGGTGATTACATACCCTAGTTGGTTGGTTG
ACAGTGGGGCGACTAGTCACATCATTGCTGATCTTGAGAATCTGAATATGAAACTGAATATCGTGGACAAGGCAACAAGGAAAGTAATACTACAGGGGATACTTAAGGAT
AGACTCTACCAGTTGAAGCTTACTCTCCTAGGGCCTCAACTCATTCACAGAAGCAATGTTTCTTTGTCAAGCACAAGTTGTTTGGAGTCTACTAGTCATCTATCTTCCTA
TGTTATTAGTTTCAAGTCACATGTTGTGTTTCCTTTCAAATCCTTTGTTTCTTCTACTTATGTAAGTCATGACAAGCCTCAAAAGATGTGGGGCATCAAAGATAGGTCGT
CCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGATGGTAATGAAGAACAGTCTTCCCTATCTCAAACTCAAGTATCTCTTTCTGCTATAACACTTCCCACTGCAAATCCATCAACTAATCCTTCCTTTGACCA
TCCATTAAGTACCGTCCTTACTGTCAAACTTGATGATAGATTGGAGGCAGAGTATTTACCAATTGTCAGCATTATTGAAGGCAAGGATGGCGTCCCTTGGCATGAACTCT
ATTCTACACTTCTTACTTTTGAGAATAACTTGGTGTGGTTGAATGTTGTTAATCCTCCAAGTGGAAGTGTTGGAGAAGCTACAGCCAATTATGGCTACAACAAAATGCAA
CTTTCTGGTGGTAACCAAACAATACTGGACAGAATAAAAATTATGGGAAAACTAACCGCAATGAGAGGGGAAGAGGTCGTGGAAGATATTCTCCATATCGAGGTAATGTG
TCCAAACCAACATGTCAAGTTTGTGGAAAATTTGGACACTCTACTGCTATTTGTTACCATAGCCTATGTAGCAACTCCTGAGGTGATTACATACCCTAGTTGGTTGGTTG
ACAGTGGGGCGACTAGTCACATCATTGCTGATCTTGAGAATCTGAATATGAAACTGAATATCGTGGACAAGGCAACAAGGAAAGTAATACTACAGGGGATACTTAAGGAT
AGACTCTACCAGTTGAAGCTTACTCTCCTAGGGCCTCAACTCATTCACAGAAGCAATGTTTCTTTGTCAAGCACAAGTTGTTTGGAGTCTACTAGTCATCTATCTTCCTA
TGTTATTAGTTTCAAGTCACATGTTGTGTTTCCTTTCAAATCCTTTGTTTCTTCTACTTATGTAAGTCATGACAAGCCTCAAAAGATGTGGGGCATCAAAGATAGGTCGT
CCATTTGA
Protein sequenceShow/hide protein sequence
MATDGNEEQSSLSQTQVSLSAITLPTANPSTNPSFDHPLSTVLTVKLDDRLEAEYLPIVSIIEGKDGVPWHELYSTLLTFENNLVWLNVVNPPSGSVGEATANYGYNKMQ
LSGGNQTILDRIKIMGKLTAMRGEEVVEDILHIEVMCPNQHVKFVENLDTLLLFVTIAYVATPEVITYPSWLVDSGATSHIIADLENLNMKLNIVDKATRKVILQGILKD
RLYQLKLTLLGPQLIHRSNVSLSSTSCLESTSHLSSYVISFKSHVVFPFKSFVSSTYVSHDKPQKMWGIKDRSSI