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Lag0039695 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039695
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr2:48500808..48501119
RNA-Seq ExpressionLag0039695
SyntenyLag0039695
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044249 - cellular biosynthetic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025506.1 transcription initiation factor TFIID subunit 2-like [Cucumis melo var. makuwa]7.7e-2257.61Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLY
        MA+ R+DIEKFDGKG F LW AK+KAI+G+RK L A+ +P+K+P  ++ E+KETM   AYG I+LNLS++VLR+VI +ET   +W KL +LY
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLY

KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.9e-2251.49Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK
        M   +F+IEKFDG GDF LW  +I AILG +KAL AL +P ++PA+++  ++ET+   AY T+I+N++++VLRQVI E T    W KL  LYE KD  NK
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK

Query:  M
        M
Subjt:  M

XP_038880370.1 uncharacterized protein LOC120072018 [Benincasa hispida]1.2e-2253Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK
        MA  R++IEKFDGK DF+L  AKIKA+LG++K L A+++P K P ++S  DKET+ + AYGTIILN+++S+LRQ++ + T   +W KLN++Y  KD  NK
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK

XP_038889933.1 uncharacterized protein LOC120079695 [Benincasa hispida]1.7e-2150Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK
        M   RF+IEKFDGK DF+LW AKIKA+LG++KAL A+++  K P + +  +KE + + AYGTI+LN++++VLRQ++  +T   +W KLN++Y  KD  NK
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]1.3e-2149.51Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK
        MA  R++IEKFD K DF+LW  KIK +LG++KAL A+++P K P +++  +KET+ + A GTI+LN++++VLRQVI++ T   +W KLN++Y  KD  NK
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK

Query:  MCL
          L
Subjt:  MCL

TrEMBL top hitse value%identityAlignment
A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-2251.49Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK
        M   +F+IEKFDG GDF LW  +I AILG +KAL AL +P ++PA+++  ++ET+   AY T+I+N++++VLRQVI E T    W KL  LYE KD  NK
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK

Query:  M
        M
Subjt:  M

A0A5A7UZ07 Retrotransposon protein, putative, Ty1-copia subclass5.9e-2049.5Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK
        M   +F+IEKFDG GDF L   +I AILG +KAL AL +P ++ A+++  ++ET+   AYGT+I+N++ +VLRQ+I E T    W KL  LYE KD  NK
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK

Query:  M
        M
Subjt:  M

A0A5C7GXL9 Sucrose-phosphate phosphatase5.9e-2049.49Show/hide
Query:  RFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNKMCL
        +FDI+KFDG GDF +W  K+KA+L ++K L A+  P+K+P S+++E K+ M   A GTIILNLS++VLR++  E+T   +W KL  LY TK   NK+ L
Subjt:  RFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNKMCL

A0A5C7HB65 gag_pre-integrs domain-containing protein5.9e-2049.49Show/hide
Query:  RFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNKMCL
        +FDI+KFDG GDF +W  K+KA+L ++K L A+  P+K+P S+++E K+ M   A GTIILNLS++VLR++  E+T   +W KL  LY TK   NK+ L
Subjt:  RFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNKMCL

A0A5D3BQH4 Transcription initiation factor TFIID subunit 2-like3.7e-2257.61Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLY
        MA+ R+DIEKFDGKG F LW AK+KAI+G+RK L A+ +P+K+P  ++ E+KETM   AYG I+LNLS++VLR+VI +ET   +W KL +LY
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLY

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-0829.13Show/hide
Query:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK
        M+  ++++ KF+G   F  W  +++ +L ++     L    K P ++  ED   ++  A   I L+LS+ V+  +I E+T   IW +L  LY +K   NK
Subjt:  MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNK

Query:  MCL
        + L
Subjt:  MCL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGCAAGATTTGATATAGAGAAATTTGATGGAAAAGGAGATTTCGACTTATGGAATGCCAAGATCAAGGCGATACTTGGGGAACGAAAGGCACTCTATGCATT
ATCAGAACCTGATAAAATACCTGCATCTATCTCAATCGAAGACAAAGAAACCATGAACATGACTGCGTATGGGACTATCATATTGAATCTTAGTAACAGTGTCTTGAGAC
AAGTAATACATGAGGAGACTCCATTGAAGATTTGGGCAAAGTTGAACAAGCTTTATGAGACCAAAGATGCTCATAATAAGATGTGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGGCAAGATTTGATATAGAGAAATTTGATGGAAAAGGAGATTTCGACTTATGGAATGCCAAGATCAAGGCGATACTTGGGGAACGAAAGGCACTCTATGCATT
ATCAGAACCTGATAAAATACCTGCATCTATCTCAATCGAAGACAAAGAAACCATGAACATGACTGCGTATGGGACTATCATATTGAATCTTAGTAACAGTGTCTTGAGAC
AAGTAATACATGAGGAGACTCCATTGAAGATTTGGGCAAAGTTGAACAAGCTTTATGAGACCAAAGATGCTCATAATAAGATGTGCCTTTGA
Protein sequenceShow/hide protein sequence
MALARFDIEKFDGKGDFDLWNAKIKAILGERKALYALSEPDKIPASISIEDKETMNMTAYGTIILNLSNSVLRQVIHEETPLKIWAKLNKLYETKDAHNKMCL