; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039702 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039702
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr2:48582126..48582593
RNA-Seq ExpressionLag0039702
SyntenyLag0039702
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.2e-5774.84Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D  LY +LV SLQYLTFTRPDI+ +VNRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR+ + SL  FCDSD
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WA DTSDRRSTSGFIAFLGS+PISWS+KKQ  VSRSSTEAEY SLATTTADLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

KAA0057165.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.8e-5773.55Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK C+TPMST++D +  A  F+D +LY +LV SLQYLTFTRPDI+F++NRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR+ + SL  FCDS+
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDTSD+RSTS FIAFLGS+PISWS+KKQ TVSRSSTEAEYR LATTTADLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

TYK06454.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.5e-5672.9Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D +LY +LV SLQYLTFTRPDI+F+VNRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR  + SL  FCDSD
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDTSDRRSTS FI FLG +PISWS+KKQ TVSRSS E EY SLATTT DLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

XP_016902250.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.2e-5572.9Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D ++Y +LV SLQYLTFTRPDI+F VN VSQF+HKPTV+HFS VKRILRYL G+  LGI FR+ + SL  FCDS+
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDT DR STSGFIAFLGS+PISWS+KKQ TVSRSSTEAEYRSLATTT DLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

XP_016902755.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]5.5e-5672.9Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D +LY +LV SLQYLTFTRPDI+F+VNRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR  + SL  FCDSD
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDTSDRRSTS FI FLG +PISWS+KKQ TVSRSS E EY SLATTT DLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

TrEMBL top hitse value%identityAlignment
A0A1S4E450 uncharacterized mitochondrial protein AtMg00810-like2.7e-5672.9Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D +LY +LV SLQYLTFTRPDI+F+VNRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR  + SL  FCDSD
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDTSDRRSTS FI FLG +PISWS+KKQ TVSRSS E EY SLATTT DLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

A0A5A7SGQ3 Putative mitochondrial protein2.7e-5672.9Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D +LY +LV SLQYLTFTRPDI+F+VNRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR  + SL  FCDSD
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDTSDRRSTS FI FLG +PISWS+KKQ TVSRSS E EY SLATTT DLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

A0A5A7TPR4 Putative mitochondrial protein1.1e-5774.84Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D  LY +LV SLQYLTFTRPDI+ +VNRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR+ + SL  FCDSD
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WA DTSDRRSTSGFIAFLGS+PISWS+KKQ  VSRSSTEAEY SLATTTADLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

A0A5D3C550 Putative mitochondrial protein2.7e-5672.9Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK+C+TPMST++DL+  A  F+D +LY +LV SLQYLTFTRPDI+F+VNRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR  + SL  FCDSD
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDTSDRRSTS FI FLG +PISWS+KKQ TVSRSS E EY SLATTT DLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

A0A5D3DUH6 Putative mitochondrial protein1.8e-5773.55Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD
        M+SAK C+TPMST++D +  A  F+D +LY +LV SLQYLTFTRPDI+F++NRVSQFMHKPTV+HFS VKRILRYL G+  LGI FR+ + SL  FCDS+
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSD

Query:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        WAGDTSD+RSTS FIAFLGS+PISWS+KKQ TVSRSSTEAEYR LATTTADLYW+
Subjt:  WAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1619.2e-2243.75Show/hide
Query:  YHQLVDSLQYL-TFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLS-LTAFCDSDWAGDTSDRRSTSGFIAFLGSSPISWSA
        Y   V ++ YL   TRPD++ AV  +SQF   P   H+  +KR+LRYL  ++  G+ F RA  + L  + D+DWAGD   RRSTSG++  L    +SW +
Subjt:  YHQLVDSLQYL-TFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLS-LTAFCDSDWAGDTSDRRSTSGFIAFLGSSPISWSA

Query:  KKQPTVSRSSTEAEYRSLATTTADLYWL
        KKQ TV+ SSTE EY +L+  T +  WL
Subjt:  KKQPTVSRSSTEAEYRSLATTTADLYWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-1639.37Show/hide
Query:  YHQLVDSLQY-LTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAK
        Y   V SL Y +  TRPDI+ AV  VS+F+  P   H+  VK ILRYL G+    + F  ++  L  + D+D AGD  +R+S++G++       ISW +K
Subjt:  YHQLVDSLQY-LTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSDWAGDTSDRRSTSGFIAFLGSSPISWSAK

Query:  KQPTVSRSSTEAEYRSLATTTADLYWL
         Q  V+ S+TEAEY +   T  ++ WL
Subjt:  KQPTVSRSSTEAEYRSLATTTADLYWL

P92519 Uncharacterized mitochondrial protein AtMg008102.3e-3651.61Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGI-LFRRANLSLTAFCDS
        M   K   TP+   ++  +  + + D + +  +V +LQYLT TRPDIS+AVN V Q MH+PT+  F  +KR+LRY+ G+   G+ + + + L++ AFCDS
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGI-LFRRANLSLTAFCDS

Query:  DWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYW
        DWAG TS RRST+GF  FLG + ISWSAK+QPTVSRSSTE EYR+LA T A+L W
Subjt:  DWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.3e-3954.78Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYA-SLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRAN-LSLTAFCD
        M +AK   TPM+ +  L +Y+ +   D T Y  +V SLQYL FTRPDIS+AVNR+SQFMH PT  H   +KRILRYL+G+   GI  ++ N LSL A+ D
Subjt:  MSSAKTCLTPMSTTVDLHIYA-SLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRAN-LSLTAFCD

Query:  SDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        +DWAGD  D  ST+G+I +LG  PISWS+KKQ  V RSSTEAEYRS+A T++++ W+
Subjt:  SDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.8e-3954.14Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYA-SLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRAN-LSLTAFCD
        M +AK   TPM+T+  L +++ +   D T Y  +V SLQYL FTRPD+S+AVNR+SQ+MH PT  H++ +KR+LRYL+G+   GI  ++ N LSL A+ D
Subjt:  MSSAKTCLTPMSTTVDLHIYA-SLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRAN-LSLTAFCD

Query:  SDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
        +DWAGDT D  ST+G+I +LG  PISWS+KKQ  V RSSTEAEYRS+A T+++L W+
Subjt:  SDWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.1e-2541.83Show/hide
Query:  KTCLTPMSTTVDLHIYA-SLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILF-RRANLSLTAFCDSDWA
        K    PM  +V    ++   F DA  Y +L+  L YL  TR DISFAVN++SQF   P + H   V +IL Y+ G+   G+ +  +A + L  F D+ + 
Subjt:  KTCLTPMSTTVDLHIYA-SLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILF-RRANLSLTAFCDSDWA

Query:  GDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL
             RRST+G+  FLG+S ISW +KKQ  VS+SS EAEYR+L+  T ++ WL
Subjt:  GDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL

ATMG00240.1 Gag-Pol-related retrotransposon family protein3.0e-1241.98Show/hide
Query:  YLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILF-RRANLSLTAFCDSDWAGDTSDRRSTSGFIAFL
        YLT TRPD++FAVNR+SQF           V ++L Y+ G+   G+ +   ++L L AF DSDWA     RRS +GF + +
Subjt:  YLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILF-RRANLSLTAFCDSDWAGDTSDRRSTSGFIAFL

ATMG00810.1 DNA/RNA polymerases superfamily protein1.6e-3751.61Show/hide
Query:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGI-LFRRANLSLTAFCDS
        M   K   TP+   ++  +  + + D + +  +V +LQYLT TRPDIS+AVN V Q MH+PT+  F  +KR+LRY+ G+   G+ + + + L++ AFCDS
Subjt:  MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGI-LFRRANLSLTAFCDS

Query:  DWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYW
        DWAG TS RRST+GF  FLG + ISWSAK+QPTVSRSSTE EYR+LA T A+L W
Subjt:  DWAGDTSDRRSTSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCTGCTAAGACATGCTTAACACCCATGTCTACTACAGTTGATCTTCATATCTATGCATCGTTATTTCACGATGCCACGCTTTATCATCAACTGGTTGACTCTCT
TCAGTATCTTACTTTTACACGACCTGACATTTCCTTTGCAGTAAATCGTGTAAGTCAATTCATGCATAAACCTACAGTTGTTCATTTCTCTACTGTCAAACGTATCTTGC
GTTATCTCTCTGGCTCCAAACCACTTGGCATTCTTTTTCGCCGTGCCAATTTGTCTCTTACTGCATTTTGTGACTCTGATTGGGCTGGTGATACTTCTGATCGACGTTCC
ACATCTGGCTTCATTGCTTTCCTTGGCTCCAGTCCAATATCCTGGTCAGCCAAAAAGCAACCTACCGTCTCACGTTCTTCCACTGAGGCTGAATATCGCTCCCTTGCGAC
CACAACAGCAGATCTTTACTGGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCTGCTAAGACATGCTTAACACCCATGTCTACTACAGTTGATCTTCATATCTATGCATCGTTATTTCACGATGCCACGCTTTATCATCAACTGGTTGACTCTCT
TCAGTATCTTACTTTTACACGACCTGACATTTCCTTTGCAGTAAATCGTGTAAGTCAATTCATGCATAAACCTACAGTTGTTCATTTCTCTACTGTCAAACGTATCTTGC
GTTATCTCTCTGGCTCCAAACCACTTGGCATTCTTTTTCGCCGTGCCAATTTGTCTCTTACTGCATTTTGTGACTCTGATTGGGCTGGTGATACTTCTGATCGACGTTCC
ACATCTGGCTTCATTGCTTTCCTTGGCTCCAGTCCAATATCCTGGTCAGCCAAAAAGCAACCTACCGTCTCACGTTCTTCCACTGAGGCTGAATATCGCTCCCTTGCGAC
CACAACAGCAGATCTTTACTGGTTATGA
Protein sequenceShow/hide protein sequence
MSSAKTCLTPMSTTVDLHIYASLFHDATLYHQLVDSLQYLTFTRPDISFAVNRVSQFMHKPTVVHFSTVKRILRYLSGSKPLGILFRRANLSLTAFCDSDWAGDTSDRRS
TSGFIAFLGSSPISWSAKKQPTVSRSSTEAEYRSLATTTADLYWL