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Lag0039706 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039706
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:48658664..48660046
RNA-Seq ExpressionLag0039706
SyntenyLag0039706
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.3e-3332Show/hide
Query:  IWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDEE
        IW  + +++++ +G N+F+  F+ +  +K++ EGGPW FD+ LLV  E  G E+   L+FRY  FWI   NLP  C +R+    LG  VG  + ++  E 
Subjt:  IWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDEE

Query:  GRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLREC--EDKTSTKDEAIQYGPWIRNDSPIKIKSKRTKEKAESG
        G C G+ +R+RV I+V  PLKR   + +G   +   + I YE+LP++CY CG++GHL+R+C    K  T   + ++GPW+R  S  + +SK T EK  S 
Subjt:  GRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLREC--EDKTSTKDEAIQYGPWIRNDSPIKIKSKRTKEKAESG

Query:  WTQRGRGRRNHGRGRGDRFANMSESEGDGKSNSGKDESEWESESESQTTGEEPASSGERKWEQLPRTIAGNQTATYNELIETGKDKKGKAICQEKEEGQK
              G R    G  D   N+   +G  K N GKD S    + E      E  S       +    ++     +  EL++  +    + I ++  +  K
Subjt:  WTQRGRGRRNHGRGRGDRFANMSESEGDGKSNSGKDESEWESESESQTTGEEPASSGERKWEQLPRTIAGNQTATYNELIETGKDKKGKAICQEKEEGQK

TXG57565.1 hypothetical protein EZV62_015394 [Acer yangbiense]4.3e-3236.6Show/hide
Query:  KIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDE
        +IW L   + ++ V S +F   F+    ++KV  GGPWSFD AL+V  E  G      LKF    FW+H  NLP +C +++ A+ LG  +G    ++   
Subjt:  KIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDE

Query:  EGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAI---QYGPWIRNDSPIKIKSKR
         G C G+ LRVRV I++ +PL+R   + V    EE  + I++E+LP++C+ CG LGH++R C +    ++  +   QYG W+R  SP+K++++R
Subjt:  EGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAI---QYGPWIRNDSPIKIKSKR

TXG70618.1 hypothetical protein EZV62_005553 [Acer yangbiense]3.7e-3133.82Show/hide
Query:  MMPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVE
        MMPKIW       I+ +  N F  TFK  + + ++  G PWSFD+ALLV VE KG      + F   +FW+    +P IC + +   ALGN +G  + ++
Subjt:  MMPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVE

Query:  VDEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTST---KDEAIQYGPWIRNDSPIKIKSKRTKE
            G C G+ + VRV I++ +PL+    + V    +E  + +RYE+L ++C+ CG +GH++ +C  + ++   +D  + YGPW+R  SP +  + R K+
Subjt:  VDEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTST---KDEAIQYGPWIRNDSPIKIKSKRTKE

Query:  KAES
        +  S
Subjt:  KAES

XP_015382889.1 uncharacterized protein LOC102626150 [Citrus sinensis]9.6e-3233.99Show/hide
Query:  MPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEV
        M ++W    ++ I+K+G N+F   F +   K+ +  GGPW FDRAL+V VE  G        F   S W+   ++P +C S++ A  LG  +G  E V+ 
Subjt:  MPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEV

Query:  DEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTM-AEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAIQYGPWIRNDSPIKIKSKRTKEKAE
        ++ G C G  LR+R+ +++ +PLK+   ++     AE+  +++ YE+LPD+C+ CGR+GH  REC    S   + + YGPW+R    I I  K  + + +
Subjt:  DEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTM-AEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAIQYGPWIRNDSPIKIKSKRTKEKAE

Query:  SGW
          W
Subjt:  SGW

XP_042952204.1 uncharacterized protein LOC122289286 [Carya illinoinensis]1.3e-3132.43Show/hide
Query:  MPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEV
        M K+WNLEG I+ K++G N F   F+    K+KV +G PWSFDR L+   + K       + F+   FW+   N+P    + +    LG+ +G    VE 
Subjt:  MPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEV

Query:  DEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAIQYGPWIR------------------
        D++G   G  LR+RV +++ +PL R  LIKV    ++ WI  +YE+LP++C+ CG+L H+  +C  +T++K    QYG W+R                  
Subjt:  DEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAIQYGPWIR------------------

Query:  ------NDSPIKIKSKRTKEKAESGWTQRGRGRRNHGRGRGDRFANMSESEGDGKSNSG
              N SP++ K+    +K  SGW+  G          G+   N + ++GD K  SG
Subjt:  ------NDSPIKIKSKRTKEKAESGWTQRGRGRRNHGRGRGDRFANMSESEGDGKSNSG

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)7.9e-3234.63Show/hide
Query:  MPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEV
        M ++W    ++ I+K+G N+F   F +   K+ +  GGPW FDRAL+   E  G        F + SFW+   ++P +C S+  A  LG  +G  E VE 
Subjt:  MPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEV

Query:  DEEGRCGGESLRVRVKIEVQEPLKR-ATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAIQYGPWIR-NDSPIKIKSKRTKEKA
        D  G C G+ LR+R+ +++ +PLK+   L +    A++  +++ YE+LPD+C+ CGR+GH  REC    S   + + YGPW++ N    K+K  R +++ 
Subjt:  DEEGRCGGESLRVRVKIEVQEPLKR-ATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAIQYGPWIR-NDSPIKIKSKRTKEKA

Query:  ESGWT
           WT
Subjt:  ESGWT

A0A5C7H9Y2 CCHC-type domain-containing protein6.5e-3432Show/hide
Query:  IWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDEE
        IW  + +++++ +G N+F+  F+ +  +K++ EGGPW FD+ LLV  E  G E+   L+FRY  FWI   NLP  C +R+    LG  VG  + ++  E 
Subjt:  IWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDEE

Query:  GRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLREC--EDKTSTKDEAIQYGPWIRNDSPIKIKSKRTKEKAESG
        G C G+ +R+RV I+V  PLKR   + +G   +   + I YE+LP++CY CG++GHL+R+C    K  T   + ++GPW+R  S  + +SK T EK  S 
Subjt:  GRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLREC--EDKTSTKDEAIQYGPWIRNDSPIKIKSKRTKEKAESG

Query:  WTQRGRGRRNHGRGRGDRFANMSESEGDGKSNSGKDESEWESESESQTTGEEPASSGERKWEQLPRTIAGNQTATYNELIETGKDKKGKAICQEKEEGQK
              G R    G  D   N+   +G  K N GKD S    + E      E  S       +    ++     +  EL++  +    + I ++  +  K
Subjt:  WTQRGRGRRNHGRGRGDRFANMSESEGDGKSNSGKDESEWESESESQTTGEEPASSGERKWEQLPRTIAGNQTATYNELIETGKDKKGKAICQEKEEGQK

A0A5C7HLA0 CCHC-type domain-containing protein2.1e-3236.6Show/hide
Query:  KIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDE
        +IW L   + ++ V S +F   F+    ++KV  GGPWSFD AL+V  E  G      LKF    FW+H  NLP +C +++ A+ LG  +G    ++   
Subjt:  KIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDE

Query:  EGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAI---QYGPWIRNDSPIKIKSKR
         G C G+ LRVRV I++ +PL+R   + V    EE  + I++E+LP++C+ CG LGH++R C +    ++  +   QYG W+R  SP+K++++R
Subjt:  EGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAI---QYGPWIRNDSPIKIKSKR

A0A5C7IND8 CCHC-type domain-containing protein1.8e-3133.82Show/hide
Query:  MMPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVE
        MMPKIW       I+ +  N F  TFK  + + ++  G PWSFD+ALLV VE KG      + F   +FW+    +P IC + +   ALGN +G  + ++
Subjt:  MMPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVE

Query:  VDEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTST---KDEAIQYGPWIRNDSPIKIKSKRTKE
            G C G+ + VRV I++ +PL+    + V    +E  + +RYE+L ++C+ CG +GH++ +C  + ++   +D  + YGPW+R  SP +  + R K+
Subjt:  VDEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTST---KDEAIQYGPWIRNDSPIKIKSKRTKE

Query:  KAES
        +  S
Subjt:  KAES

A0A5C7ISE3 CCHC-type domain-containing protein1.8e-3134.27Show/hide
Query:  MMPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVE
        + P+IW       I+ +  N F  TFK+   + +V +GGPWSFD+ALLV  E  G      +KF   +FW+   N+P +C + +  + LG  VG  + V+
Subjt:  MMPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVE

Query:  VDEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLREC-EDKTSTKDEAIQ--YGPWIRNDSPIKI---KSKR
          + G C G+ +RVRV I+V +PL+R   + V     E  + ++YE+LP++C+ CG LGH +R C ++K     E     +G W++ DSP+ I   + + 
Subjt:  VDEEGRCGGESLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLREC-EDKTSTKDEAIQ--YGPWIRNDSPIKI---KSKR

Query:  TKEKAESGWTQRG
        T  + E G +  G
Subjt:  TKEKAESGWTQRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCAAAAATATGGAATCTAGAAGGAAAGATAAGTATAAAAAAAGTAGGATCAAACCTCTTTGAGTGCACTTTTAAGACTTTTAGAGGGAAGAAGAAAGTTACGGA
AGGTGGTCCTTGGAGTTTCGACAGAGCCCTCTTGGTTTTCGTTGAGATTAAAGGACACGAAAGATACGCTAGCCTAAAGTTCAGGTATGCTTCTTTTTGGATACACTTCA
TGAACTTACCAAGGATTTGTTATTCCAGGAAATGGGCTGAAGCCTTGGGGAATGCGGTTGGCATCTTCGAAAGGGTGGAGGTGGATGAAGAAGGAAGATGTGGCGGTGAA
TCCCTGCGTGTCAGAGTTAAAATAGAAGTCCAAGAGCCGTTGAAAAGAGCCACTTTGATCAAGGTGGGAACGATGGCTGAAGAAGAATGGATTCAGATCAGATATGAGAA
ATTGCCAGATTATTGCTATGGATGCGGTAGGTTGGGTCATCTGTTGAGAGAGTGTGAAGACAAGACCAGCACCAAAGATGAAGCTATTCAGTACGGGCCTTGGATTAGAA
ATGATTCTCCGATCAAAATTAAATCGAAGAGAACAAAAGAGAAAGCTGAATCGGGGTGGACTCAGAGGGGAAGAGGTCGTCGAAACCATGGCAGGGGGAGGGGAGATAGA
TTCGCAAACATGTCGGAAAGCGAAGGAGATGGAAAAAGCAACAGCGGCAAAGACGAATCAGAATGGGAATCTGAATCTGAATCTCAGACGACCGGAGAAGAACCGGCGAG
CAGCGGAGAAAGAAAATGGGAACAACTTCCTAGGACCATCGCGGGGAACCAAACGGCTACCTACAATGAGCTGATAGAAACAGGAAAGGACAAAAAAGGTAAGGCCATTT
GTCAGGAAAAAGAGGAAGGACAGAAAGTGGGGCCGGATATGCAAGCCTTCATAAACATGGAAAAGGAAAGTAGTAAGAGTCACATGGATGCTTCTTCAACCAAGGTAGCC
ATAGAAAAGAGAAACATGGGCCAAAAGAAGGATTTGGGCCAAAATCCAAACCCTGAAACAAAGGAAATGGAAAAGGTTTTTTCCAAACACAAAGATGACCAGGTTGGAGG
TAGCAGTAACGAAGTCAAAGACCAATTATCTGTGGGGAATTGTGTTAACAATGGTGAATCTGGCACTCAAAAAATTCATGGTAAATCCTGGAAAAGAAGAGCCAGAGAAG
ACCAAAGAAAGGATACTAGTGGCAGCATGTTGAGTGGGCTAAACAGTAATGGTAAGCATGAAAGAGAGACAGAAGAGGAGGGAAATGATTCAAAAAAGCAGCGCACAAGC
TACTTCGGGGAACCCGTTGTGATATCGGCGGCGGCTGACTTTCAGCCCCGCCGGACGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCCAAAAATATGGAATCTAGAAGGAAAGATAAGTATAAAAAAAGTAGGATCAAACCTCTTTGAGTGCACTTTTAAGACTTTTAGAGGGAAGAAGAAAGTTACGGA
AGGTGGTCCTTGGAGTTTCGACAGAGCCCTCTTGGTTTTCGTTGAGATTAAAGGACACGAAAGATACGCTAGCCTAAAGTTCAGGTATGCTTCTTTTTGGATACACTTCA
TGAACTTACCAAGGATTTGTTATTCCAGGAAATGGGCTGAAGCCTTGGGGAATGCGGTTGGCATCTTCGAAAGGGTGGAGGTGGATGAAGAAGGAAGATGTGGCGGTGAA
TCCCTGCGTGTCAGAGTTAAAATAGAAGTCCAAGAGCCGTTGAAAAGAGCCACTTTGATCAAGGTGGGAACGATGGCTGAAGAAGAATGGATTCAGATCAGATATGAGAA
ATTGCCAGATTATTGCTATGGATGCGGTAGGTTGGGTCATCTGTTGAGAGAGTGTGAAGACAAGACCAGCACCAAAGATGAAGCTATTCAGTACGGGCCTTGGATTAGAA
ATGATTCTCCGATCAAAATTAAATCGAAGAGAACAAAAGAGAAAGCTGAATCGGGGTGGACTCAGAGGGGAAGAGGTCGTCGAAACCATGGCAGGGGGAGGGGAGATAGA
TTCGCAAACATGTCGGAAAGCGAAGGAGATGGAAAAAGCAACAGCGGCAAAGACGAATCAGAATGGGAATCTGAATCTGAATCTCAGACGACCGGAGAAGAACCGGCGAG
CAGCGGAGAAAGAAAATGGGAACAACTTCCTAGGACCATCGCGGGGAACCAAACGGCTACCTACAATGAGCTGATAGAAACAGGAAAGGACAAAAAAGGTAAGGCCATTT
GTCAGGAAAAAGAGGAAGGACAGAAAGTGGGGCCGGATATGCAAGCCTTCATAAACATGGAAAAGGAAAGTAGTAAGAGTCACATGGATGCTTCTTCAACCAAGGTAGCC
ATAGAAAAGAGAAACATGGGCCAAAAGAAGGATTTGGGCCAAAATCCAAACCCTGAAACAAAGGAAATGGAAAAGGTTTTTTCCAAACACAAAGATGACCAGGTTGGAGG
TAGCAGTAACGAAGTCAAAGACCAATTATCTGTGGGGAATTGTGTTAACAATGGTGAATCTGGCACTCAAAAAATTCATGGTAAATCCTGGAAAAGAAGAGCCAGAGAAG
ACCAAAGAAAGGATACTAGTGGCAGCATGTTGAGTGGGCTAAACAGTAATGGTAAGCATGAAAGAGAGACAGAAGAGGAGGGAAATGATTCAAAAAAGCAGCGCACAAGC
TACTTCGGGGAACCCGTTGTGATATCGGCGGCGGCTGACTTTCAGCCCCGCCGGACGCCATGA
Protein sequenceShow/hide protein sequence
MMPKIWNLEGKISIKKVGSNLFECTFKTFRGKKKVTEGGPWSFDRALLVFVEIKGHERYASLKFRYASFWIHFMNLPRICYSRKWAEALGNAVGIFERVEVDEEGRCGGE
SLRVRVKIEVQEPLKRATLIKVGTMAEEEWIQIRYEKLPDYCYGCGRLGHLLRECEDKTSTKDEAIQYGPWIRNDSPIKIKSKRTKEKAESGWTQRGRGRRNHGRGRGDR
FANMSESEGDGKSNSGKDESEWESESESQTTGEEPASSGERKWEQLPRTIAGNQTATYNELIETGKDKKGKAICQEKEEGQKVGPDMQAFINMEKESSKSHMDASSTKVA
IEKRNMGQKKDLGQNPNPETKEMEKVFSKHKDDQVGGSSNEVKDQLSVGNCVNNGESGTQKIHGKSWKRRAREDQRKDTSGSMLSGLNSNGKHERETEEEGNDSKKQRTS
YFGEPVVISAAADFQPRRTP