; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039707 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039707
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:48665243..48666214
RNA-Seq ExpressionLag0039707
SyntenyLag0039707
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5469007.1 hypothetical protein F2P56_013112 [Juglans regia]8.8e-2440.14Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +D+ L+L +E  G  +   L   H  FW+   +LP +  N    + +G+ +  F  VD    E+E G  MRVRV +D+  PL+R   +K+G +   
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR
         W+++ YE+LPDFCY CG LGH  R+C++F  VN + D LPYG  LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]6.1e-2533.17Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        ++GGPW++D+ L++  E  G E+ + L+F++  FWI    LP  C NR+    LG  V + + +D       VG  +R+RV +DV NPL+RG  + +G  
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETS
         +   + I YE+LP+FCY CG++GHL RDC  +  E+ +     +GP +R  A+ R +      KK+     RE        N   +G      G ++S
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETS

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]6.5e-2742.47Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +DRALI+ +      +   + F++ S W+HF +L   C N+  A  LGNA+  FE V+ +A+ +  G  +RVRV+ DV  PL RG  + +      
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR
         WI I+YE+LPDF Y CGRL H+ +DCSD  V++   +L YGP LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.6e-2536.98Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        M  GPW +D+ALI+ ++    +  S L+F   +FWIH  +LP    N+  A  LGNA+  F  VD +   +  G S+R+RV +D+  PLRRG  I I   
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKD--REERLGGQDRNKEDQG
            WI I+YE+LPDFCY CG +GH + DC       + +++    YGP L      R   S    +K  KGK   RE+  G    N +++G
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKD--REERLGGQDRNKEDQG

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.8e-2438.46Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        +  GPW +D+ L++  E+    + S ++     FW+H   LP V  N+K  E +GNAV +F  +D++      G +MR+RV +DV+ PLRRG  + + S 
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKG----DLPYGPELRKEAI
        AE  W+  +YE+LP +CY CGRLGH  R+C D   +  G     L YG  LR + I
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKG----DLPYGPELRKEAI

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)8.1e-2334.48Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        M GGPW +DRALI   E  G     +  F H SFW+   ++P +C ++  A  LG  + + E V+ DA     G  +R+R+ VD+  PL++  +I++  +
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  ---AEEEWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDR
           A++  +++ YE+LPDFC+ CGR+GH  R+C  ++  +K +L YGP L+   +        E  K  +G+DR
Subjt:  ---AEEEWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDR

A0A5C7H9Y2 CCHC-type domain-containing protein3.0e-2533.17Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        ++GGPW++D+ L++  E  G E+ + L+F++  FWI    LP  C NR+    LG  V + + +D       VG  +R+RV +DV NPL+RG  + +G  
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETS
         +   + I YE+LP+FCY CG++GHL RDC  +  E+ +     +GP +R  A+ R +      KK+     RE        N   +G      G ++S
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETS

A0A6J1BSZ1 uncharacterized protein LOC1110054813.2e-2742.47Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +DRALI+ +      +   + F++ S W+HF +L   C N+  A  LGNA+  FE V+ +A+ +  G  +RVRV+ DV  PL RG  + +      
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR
         WI I+YE+LPDF Y CGRL H+ +DCSD  V++   +L YGP LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR

A0A6J1DU55 uncharacterized protein LOC1110231357.8e-2636.98Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        M  GPW +D+ALI+ ++    +  S L+F   +FWIH  +LP    N+  A  LGNA+  F  VD +   +  G S+R+RV +D+  PLRRG  I I   
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKD--REERLGGQDRNKEDQG
            WI I+YE+LPDFCY CG +GH + DC       + +++    YGP L      R   S    +K  KGK   RE+  G    N +++G
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKD--REERLGGQDRNKEDQG

A0A6P9EH14 uncharacterized protein LOC1089842004.3e-2440.14Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +D+ L+L +E  G  +   L   H  FW+   +LP +  N    + +G+ +  F  VD    E+E G  MRVRV +D+  PL+R   +K+G +   
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR
         W+++ YE+LPDFCY CG LGH  R+C++F  VN + D LPYG  LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGGGCCATGGGTCTACGACAGAGCTCTGATATTGTTTGAAGAAATCAAAGGAGGAGAACGATACTCCCGCTTAAAATTCCAACACGCCTCCTTCTGGATACA
CTTCTTAGAATTGCCGAGAGTCTGCTTCAATAGAAAGTGGGCGGAAGCTCTTGGAAATGCGGTAGACAGGTTCGAACGAGTTGACTTTGATGCTGACGAATACGAAGTTG
GAGGATCTATGAGAGTCAGAGTGAAAGTTGATGTCCAAAATCCCCTGAGGAGAGGGACGGTAATCAAAATAGGATCAAAAGCAGAGGAGGAATGGATCAAGATAAGATAC
GAGAAACTCCCCGACTTCTGCTATGGATGTGGGCGGTTGGGTCACCTGGCCAGGGACTGTAGCGACTTTGAAGTGAACAACAAAGGGGACCTCCCATATGGTCCAGAACT
CAGGAAAGAAGCAATACCAAGAGTGAAAAGGAGTCCAGATGAAACAAAGAAAGACGAGAAAGGCAAAGACCGAGAAGAAAGGCTCGGCGGGCAAGACAGAAACAAGGAAG
ATCAAGGTGATAGAAGCCTTTTCAGAGGACATGAAACCAGCCCAGGCCAACCAAGCTGCCGGAAAGATAATCCGCCGGAAAATCAGTCCAGACACTTACCGGAGGTGAGG
AAGAATAGGGCAGTCTCAACGGCTACTTTCAAACCCCAAGAAGCGTCAGAGGACATGATGATTGACCAATCTGCTTCTTCCTCGTTACTGGAAAAAAAGGGAAAAAGTAC
AGAAAAAGATGTCAGTAGAGGCAGCTACCAGACAAGACAAAAGAGAAGGAAAGAATGGAAATCGAAGCAAAAAGCAATGAGGATAGGAAAAGGAAAGGGCCCAAGTCAAA
CTCATGCTCCGAAAAGAACTTGGGCCAAAAAACTCAAAACTCAGAAAGGGGCCAAACAAGGATCCACTACGCAGACATGGAAAAAGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAGGGCCATGGGTCTACGACAGAGCTCTGATATTGTTTGAAGAAATCAAAGGAGGAGAACGATACTCCCGCTTAAAATTCCAACACGCCTCCTTCTGGATACA
CTTCTTAGAATTGCCGAGAGTCTGCTTCAATAGAAAGTGGGCGGAAGCTCTTGGAAATGCGGTAGACAGGTTCGAACGAGTTGACTTTGATGCTGACGAATACGAAGTTG
GAGGATCTATGAGAGTCAGAGTGAAAGTTGATGTCCAAAATCCCCTGAGGAGAGGGACGGTAATCAAAATAGGATCAAAAGCAGAGGAGGAATGGATCAAGATAAGATAC
GAGAAACTCCCCGACTTCTGCTATGGATGTGGGCGGTTGGGTCACCTGGCCAGGGACTGTAGCGACTTTGAAGTGAACAACAAAGGGGACCTCCCATATGGTCCAGAACT
CAGGAAAGAAGCAATACCAAGAGTGAAAAGGAGTCCAGATGAAACAAAGAAAGACGAGAAAGGCAAAGACCGAGAAGAAAGGCTCGGCGGGCAAGACAGAAACAAGGAAG
ATCAAGGTGATAGAAGCCTTTTCAGAGGACATGAAACCAGCCCAGGCCAACCAAGCTGCCGGAAAGATAATCCGCCGGAAAATCAGTCCAGACACTTACCGGAGGTGAGG
AAGAATAGGGCAGTCTCAACGGCTACTTTCAAACCCCAAGAAGCGTCAGAGGACATGATGATTGACCAATCTGCTTCTTCCTCGTTACTGGAAAAAAAGGGAAAAAGTAC
AGAAAAAGATGTCAGTAGAGGCAGCTACCAGACAAGACAAAAGAGAAGGAAAGAATGGAAATCGAAGCAAAAAGCAATGAGGATAGGAAAAGGAAAGGGCCCAAGTCAAA
CTCATGCTCCGAAAAGAACTTGGGCCAAAAAACTCAAAACTCAGAAAGGGGCCAAACAAGGATCCACTACGCAGACATGGAAAAAGATCTGA
Protein sequenceShow/hide protein sequence
MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVDRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRY
EKLPDFCYGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDETKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETSPGQPSCRKDNPPENQSRHLPEVR
KNRAVSTATFKPQEASEDMMIDQSASSSLLEKKGKSTEKDVSRGSYQTRQKRRKEWKSKQKAMRIGKGKGPSQTHAPKRTWAKKLKTQKGAKQGSTTQTWKKI