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Lag0039711 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039711
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:48768290..48768938
RNA-Seq ExpressionLag0039711
SyntenyLag0039711
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5445283.1 hypothetical protein F2P56_034346 [Juglans regia]2.2e-1942.66Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV---SPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNL-HLFFADDSLLLFRAK
        +K +L  +I+ NQSAF+ GR + DN ++ YE        +    PLSPYLF+LCAE LS +L   E   ++T + + R GP  + HLFFADDSLL  +AK
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV---SPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNL-HLFFADDSLLLFRAK

Query:  EKEARVVQDILRCDERGLGQTINFDKSIISFSSGIVVGMQDKV
         +E + V +IL   E+G GQ +N DKS I FS    +  Q ++
Subjt:  EKEARVVQDILRCDERGLGQTINFDKSIISFSSGIVVGMQDKV

XP_022149385.1 uncharacterized protein LOC111017816 [Momordica charantia]9.0e-2149.25Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRVSPLSPYLFLLCAEG----LSFMLHEVE--VAKTITGLKLSRHGPTNLHLFFADDSLLLFR
        MK +L  +IS NQSAF+ GRCVVDNAI+GYEC+H ++   S    Y F  C  G    L F+L  VE  +++   G+ L   GP   HLFFADDSL  FR
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRVSPLSPYLFLLCAEG----LSFMLHEVE--VAKTITGLKLSRHGPTNLHLFFADDSLLLFR

Query:  AKEKEARVVQDILRCDERGLGQTINFDKSIISFS
        A   EA  V+ IL   ++  GQTINF+KS+ SFS
Subjt:  AKEKEARVVQDILRCDERGLGQTINFDKSIISFS

XP_027109083.1 uncharacterized protein LOC113728935 [Coffea arabica]4.5e-2033.33Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV------------------------------------------------------------
        +K +L+  IS NQ+AFI GR ++DN IL +E LH +K +                                                             
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV------------------------------------------------------------

Query:  ------------SPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS
                     PLSPYLFLLC+EG S +L + E  K I+G+K+SR+GP+  HLFFADDSL+  +A+ +EA  +  ILR  E+G GQ+IN +KS + FS
Subjt:  ------------SPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS

Query:  SGIVVGMQDKVRQ
        S +    + +VRQ
Subjt:  SGIVVGMQDKVRQ

XP_027152311.1 uncharacterized protein LOC113752397 [Coffea eugenioides]1.3e-1932.39Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVR-------------------------------------------------------------
        +K  L+  IS NQSAF+ GR ++DN IL +E LH LK +                                                             
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVR-------------------------------------------------------------

Query:  -----------VSPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS
                     PLSPYLFLLC+EGLS ++ + ++ K +TG+K+SR  P   HLFFADDSL+  RA  +EA V+  IL+  E+  GQ IN DKS + FS
Subjt:  -----------VSPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS

Query:  SGIVVGMQDKVRQ
           +  ++++V Q
Subjt:  SGIVVGMQDKVRQ

XP_030936341.1 uncharacterized protein LOC115961505 [Quercus lobata]1.5e-2040.14Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKV-------------------RVSPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNL
        +K  LN LIS  QSAF  GR + DN ++ +E LH +K                    +  PLSPYLFL CAEGL+ +L +   A  I G  + R GP   
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKV-------------------RVSPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNL

Query:  HLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS
        HLFFADD LL  R+  +E  ++Q++L   E+  GQ +N DK+ + FS
Subjt:  HLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS

TrEMBL top hitse value%identityAlignment
A0A2N9IUS1 Reverse transcriptase domain-containing protein1.4e-1936.72Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRVS-----------------------------------PLSPYLFLLCAEGLSFMLHEVEVA
        +K +L  +IS  QSAF+ GR + DN ++ +E LH +K R +                                   PLSPYLFLLCAEGL  +L +    
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRVS-----------------------------------PLSPYLFLLCAEGLSFMLHEVEVA

Query:  KTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFSSGIVVGMQDKVRQV
        K I G+ LSR GP   HLFFADDSLL  RA+  E   + +IL   E   GQ IN +K+ + FS       Q ++ Q+
Subjt:  KTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFSSGIVVGMQDKVRQV

A0A6J1D5K1 uncharacterized protein LOC1110178164.4e-2149.25Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRVSPLSPYLFLLCAEG----LSFMLHEVE--VAKTITGLKLSRHGPTNLHLFFADDSLLLFR
        MK +L  +IS NQSAF+ GRCVVDNAI+GYEC+H ++   S    Y F  C  G    L F+L  VE  +++   G+ L   GP   HLFFADDSL  FR
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRVSPLSPYLFLLCAEG----LSFMLHEVE--VAKTITGLKLSRHGPTNLHLFFADDSLLLFR

Query:  AKEKEARVVQDILRCDERGLGQTINFDKSIISFS
        A   EA  V+ IL   ++  GQTINF+KS+ SFS
Subjt:  AKEKEARVVQDILRCDERGLGQTINFDKSIISFS

A0A6P6T223 uncharacterized protein LOC1136967821.1e-1934.93Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCL-------------KVRVS----------------------------------------------
        +K +L+  IS NQSAFI GR ++DN +L +E +H L             K+ +S                                              
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCL-------------KVRVS----------------------------------------------

Query:  ---------PLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFSSGIV
                 PLSPYLFLLC+EGLS +LH     K I GLKLSRH PT  HLFFADDSL+  +A    A  ++ IL   E+G GQ IN +KS + FS  +V
Subjt:  ---------PLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFSSGIV

Query:  VGMQDKVRQ
          +Q  + Q
Subjt:  VGMQDKVRQ

A0A6P6W173 uncharacterized protein LOC1137289352.2e-2033.33Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV------------------------------------------------------------
        +K +L+  IS NQ+AFI GR ++DN IL +E LH +K +                                                             
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV------------------------------------------------------------

Query:  ------------SPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS
                     PLSPYLFLLC+EG S +L + E  K I+G+K+SR+GP+  HLFFADDSL+  +A+ +EA  +  ILR  E+G GQ+IN +KS + FS
Subjt:  ------------SPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFS

Query:  SGIVVGMQDKVRQ
        S +    + +VRQ
Subjt:  SGIVVGMQDKVRQ

A0A803PI06 Uncharacterized protein1.8e-1935.93Show/hide
Query:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV------------------------------------SPLSPYLFLLCAEGLSFMLHEVEV
        +K +LN+LIS NQSAF+  R + DN I+  E  H +K++                                      PLSPYLFLLCAEG S +L + E 
Subjt:  MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRV------------------------------------SPLSPYLFLLCAEGLSFMLHEVEV

Query:  AKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFSSGI
         KT+ G+K++R  P   HL FADDS L  +A      V++++L   ER  GQ +NF KS +  S  +
Subjt:  AKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCDERGLGQTINFDKSIISFSSGI

SwissProt top hitse value%identityAlignment
P92555 Uncharacterized mitochondrial protein AtMg012509.4e-0543.75Show/hide
Query:  PLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDS
        PLSPYLF+LC E LS +    +    + G+++S + P   HL FADD+
Subjt:  PLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDS

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)6.7e-0643.75Show/hide
Query:  PLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDS
        PLSPYLF+LC E LS +    +    + G+++S + P   HL FADD+
Subjt:  PLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGTATGTTGAACGATTTGATTTCTCATAACCAGAGTGCATTTATTTTGGGGCGCTGTGTGGTTGATAACGCCATTCTAGGCTATGAGTGCCTTCATTGCCTGAA
AGTAAGGGTGAGTCCACTATCCCCTTACTTGTTTCTCCTATGCGCTGAAGGCCTATCATTTATGCTTCATGAAGTTGAGGTGGCAAAGACTATCACGGGCCTAAAGTTAT
CTCGACATGGCCCAACCAACTTGCACTTGTTCTTTGCTGATGATAGCCTTTTGCTCTTTCGGGCCAAGGAGAAAGAAGCTCGAGTAGTTCAGGATATCCTTCGCTGTGAT
GAACGTGGCTTAGGTCAGACAATTAACTTCGACAAATCTATTATCTCATTTAGCTCAGGAATAGTTGTGGGGATGCAGGATAAGGTGAGGCAGGTTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGTATGTTGAACGATTTGATTTCTCATAACCAGAGTGCATTTATTTTGGGGCGCTGTGTGGTTGATAACGCCATTCTAGGCTATGAGTGCCTTCATTGCCTGAA
AGTAAGGGTGAGTCCACTATCCCCTTACTTGTTTCTCCTATGCGCTGAAGGCCTATCATTTATGCTTCATGAAGTTGAGGTGGCAAAGACTATCACGGGCCTAAAGTTAT
CTCGACATGGCCCAACCAACTTGCACTTGTTCTTTGCTGATGATAGCCTTTTGCTCTTTCGGGCCAAGGAGAAAGAAGCTCGAGTAGTTCAGGATATCCTTCGCTGTGAT
GAACGTGGCTTAGGTCAGACAATTAACTTCGACAAATCTATTATCTCATTTAGCTCAGGAATAGTTGTGGGGATGCAGGATAAGGTGAGGCAGGTTTACTAG
Protein sequenceShow/hide protein sequence
MKGMLNDLISHNQSAFILGRCVVDNAILGYECLHCLKVRVSPLSPYLFLLCAEGLSFMLHEVEVAKTITGLKLSRHGPTNLHLFFADDSLLLFRAKEKEARVVQDILRCD
ERGLGQTINFDKSIISFSSGIVVGMQDKVRQVY