; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039721 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039721
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionregulator of nonsense transcripts UPF3-like
Genome locationchr2:48932960..48940804
RNA-Seq ExpressionLag0039721
SyntenyLag0039721
Gene Ontology termsGO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (biological process)
GO:0045727 - positive regulation of translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR005120 - UPF3 domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR039722 - Nonsense-mediated mRNA decay protein 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459659.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo]2.9e-26092.76Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPI+TPLMEFVRQKRAVESG+QGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SSGIGISDVG AD GKKKILLLKGKERDISHV+D MLQLQ+  +SGNSPA A+K N RREA G 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+S+NEPNPSGSEGDGKRAP++KFSKKELHGL +ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSVSQSSHL+SDSVEAYRGEMK+DIHGSRT DVTT VSGR SSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

XP_011656113.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus]1.7e-26092.95Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPI+TPLMEFVRQKRAVESG+QGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSS IGISDVGTAD GKKKILLLKGKERDISHV+D MLQLQ+  +SGNSPA A+K N RREA GG
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+S+NEPNPSGSEGDGKRA ++KFSKKELHGL +ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSV QSSHL+SDSVEA+RGEMK+DIHGSRTGDVTT VSGR SSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

XP_022149973.1 regulator of nonsense transcripts UPF3 isoform X1 [Momordica charantia]1.8e-26293.35Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNW YYRPGKTSQKDQRY+RAYIDFTRPEDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGR+GTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAKETPI+TPLMEFVRQKRAVESG+QGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQ--NTSGNSPAGATKQNQRREASGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQ ATSSGIGISDV TADSGKKKILLLKGKERDISHVADGML LQ  ++SGNSP  ATKQNQRREASG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQ--NTSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        +IRSILLNNE RHGQ SSV+QSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGL +ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDA VSQLDESS+SQSSHL+SDSVEA+R EMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGK SKRG+AGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

XP_022973412.1 regulator of nonsense transcripts UPF3-like isoform X1 [Cucurbita maxima]7.1e-25992.17Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHI DRFAGRYNW Y+RPGKTSQK+QRYARAYIDFT PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SS+KKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAK+TPI+TPLMEFVRQKRAVESG+QGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG
        GMEKKKYILKDS KNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGK RD+SH+ADGMLQ Q+  +SGNSPA ATKQNQRREA G 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        MIRSILLNN+ARHGQSSSVAQSHQKIQILNSDNGKRPPRPIN+RSGSNDMS+N+PNPSGSEGDGKRA E+KF+KKE HGL NASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPR RSDASVSQLDESSVSQS+HL+SDSVEAYRGEMKDD+HGSRTGDVTTTVSGR SSVENGSVRHVGRRGA H+MKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

XP_038890175.1 regulator of nonsense transcripts UPF3 isoform X1 [Benincasa hispida]3.7e-26092.56Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHI DRF GR+NWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGH+FVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKE PI+TPLMEFVRQKRAVESG+QGSSVPRKVKRGGAASSRKPE NSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDV TAD GKKKILLLKGKERDISHV+DGMLQLQ+  +S  SPA A+K NQRREASG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        MIRSILLNNEARHGQ+SSVAQSH KIQILNSDNGKRPPRPINARSGSNDMS+NEPNPSGSEGDGKRAP+ KFSKKELHGL + +EKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSVSQSSHL+SDSVEAYRGEMK+D+HGSRTGDVTTTVSGR SSVENGSVRHVGRRGA HVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

TrEMBL top hitse value%identityAlignment
A0A0A0KSY5 Smg4_UPF3 domain-containing protein8.1e-26192.95Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPI+TPLMEFVRQKRAVESG+QGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSS IGISDVGTAD GKKKILLLKGKERDISHV+D MLQLQ+  +SGNSPA A+K N RREA GG
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+S+NEPNPSGSEGDGKRA ++KFSKKELHGL +ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSV QSSHL+SDSVEA+RGEMK+DIHGSRTGDVTT VSGR SSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

A0A1S3CB69 regulator of nonsense transcripts UPF3 isoform X11.4e-26092.76Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSL HSDLFHHI DRFAGR+NWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSG AKETPI+TPLMEFVRQKRAVESG+QGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQSA SSGIGISDVG AD GKKKILLLKGKERDISHV+D MLQLQ+  +SGNSPA A+K N RREA G 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        +IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRP NARSGSND+S+NEPNPSGSEGDGKRAP++KFSKKELHGL +ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDASVSQL+ESSVSQSSHL+SDSVEAYRGEMK+DIHGSRT DVTT VSGR SSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

A0A6J1D779 regulator of nonsense transcripts UPF3 isoform X23.8e-25892.34Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNW YYRPGKTSQKDQRY+RAYIDFTRPEDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGR+GTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAKETPI+TPLMEFVRQKRAVESG+QGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQNTSGNSPAGATKQNQRREASGGMI
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQ ATSSGIGISDV TADSGKKKILLLKGKERDISH A       ++SGNSP  ATKQNQRREASG +I
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQNTSGNSPAGATKQNQRREASGGMI

Query:  RSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRGVW
        RSILLNNE RHGQ SSV+QSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGL +ASEKQEKRIRNKDRPDRGVW
Subjt:  RSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRGVW

Query:  APRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEK
        APRSRSDA VSQLDESS+SQSSHL+SDSVEA+R EMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGK SKRG+AGGHEK
Subjt:  APRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEK

Query:  QVWVQKSSS
        QVWVQKSSS
Subjt:  QVWVQKSSS

A0A6J1D8M3 regulator of nonsense transcripts UPF3 isoform X18.7e-26393.35Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNW YYRPGKTSQKDQRY+RAYIDFTRPEDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SSTKKDGR+GTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAKETPI+TPLMEFVRQKRAVESG+QGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQ--NTSGNSPAGATKQNQRREASGG
        GMEKKKYILKDSVKNTNRRDKSNFILVPRR+DQ ATSSGIGISDV TADSGKKKILLLKGKERDISHVADGML LQ  ++SGNSP  ATKQNQRREASG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQ--NTSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        +IRSILLNNE RHGQ SSV+QSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGL +ASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPRSRSDA VSQLDESS+SQSSHL+SDSVEA+R EMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGK SKRG+AGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

A0A6J1I7G4 regulator of nonsense transcripts UPF3-like isoform X13.4e-25992.17Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLERTKVVIRHLPPSLPHSDLFHHI DRFAGRYNW Y+RPGKTSQK+QRYARAYIDFT PEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR
        SS+KKDGREGTIYKDPDYLEFLK+IAKPAEHLPSAEIQLERKEAEQSGVAK+TPI+TPLMEFVRQKRAVESG+QGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG
        GMEKKKYILKDS KNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGK RD+SH+ADGMLQ Q+  +SGNSPA ATKQNQRREA G 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQN--TSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG
        MIRSILLNN+ARHGQSSSVAQSHQKIQILNSDNGKRPPRPIN+RSGSNDMS+N+PNPSGSEGDGKRA E+KF+KKE HGL NASEKQEKRIRNKDRPDRG
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH
        VWAPR RSDASVSQLDESSVSQS+HL+SDSVEAYRGEMKDD+HGSRTGDVTTTVSGR SSVENGSVRHVGRRGA H+MKDDGSLNPNEGKPSKRGVAGGH
Subjt:  VWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGH

Query:  EKQVWVQKSSS
        EKQVWVQKSSS
Subjt:  EKQVWVQKSSS

SwissProt top hitse value%identityAlignment
B0S733 Regulator of nonsense transcripts 3A5.3e-1525.85Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD
        +KVVIR LPPSL    L  H+       +++  + P   S     ++RAYI+F  PED+  F + FDG+VF++ KG +Y AVVE+AP Q+V +    KKD
Subjt:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD

Query:  GREGTIYKDPDYLEFL--------KVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSM
         + GTI +DP+Y  FL        K +A P   L   EI+ + +E     +AK T   TPL+E+++ K+  +   +      + +R      ++ E    
Subjt:  GREGTIYKDPDYLEFL--------KVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSM

Query:  KRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQNTSGNSPAGATKQNQRREASGG
        +R  E++K   K++ K     +K   I + ++ D+        + D G +   +K      G         D   Q++N             ++RE  G 
Subjt:  KRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQNTSGNSPAGATKQNQRREASGG

Query:  MIRSILLNNEARHGQSSSVAQSHQKIQ--ILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPD
          R     +     +     + H +    +   +  K        R+  +        P   +  GK   E   S+KE             RIRNKDRP 
Subjt:  MIRSILLNNEARHGQSSSVAQSHQKIQ--ILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPD

Query:  RGVWAPRSRS
          ++ P +R+
Subjt:  RGVWAPRSRS

Q10267 Nonsense-mediated mRNA decay protein 35.5e-1225.84Show/hide
Query:  KVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD
        KV++ +LPP+LP       I+  F     W  +  GK +   + +  + AY+ F     V EF   + GH F+++K   Y+A+V  AP Q++P S  K D
Subjt:  KVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTS--QKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKD

Query:  GREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKR--AVESGSQGSSVPRKVKRGGAASSRKPESNSMKRG---
          EG++ +DP + EF              + +   + A    V ++    TPL++++ +K+   VE G    S      +     + KP SN+ K G   
Subjt:  GREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKR--AVESGSQGSSVPRKVKRGGAASSRKPESNSMKRG---

Query:  MEKKK----------YILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTAD---SGKKKI
         E KK           ++K+   +  ++ K      P   + +A+ +    SD  T +   SGK+KI
Subjt:  MEKKK----------YILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTAD---SGKKKI

Q9BZI7 Regulator of nonsense transcripts 3B4.3e-1727.02Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKK-D
        +KVVIR LPP+L    L  H+       +++  +    TS     YARAYI+F   ED+  F + FDG+VF++ KG +Y A+VE+AP Q+  +  TKK D
Subjt:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKK-D

Query:  GREGTIYKDPDYLEFLKVIAKPAEHLPSA-EIQLERKEAE-QSGVAKETPIITPLMEFVRQKRAVESGSQGS----SVPRKVKRGGAASSRKPESNSMKR
         + GTI  DP+Y +FL+  A   E + S  E  LE  EA+ +  +AK+T   TPL+ F++ K+ +    +       + RK +R       K E    ++
Subjt:  GREGTIYKDPDYLEFLKVIAKPAEHLPSA-EIQLERKEAE-QSGVAKETPIITPLMEFVRQKRAVESGSQGS----SVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKIL--LLKGKERDISHVADGMLQLQNTS----GNSPAGATKQNQRRE
         +EK K I  D +   ++      I V R   Q+     +    +   + G +K L    K K+ D  +++D     Q+ +     +S     K  +  +
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKIL--LLKGKERDISHVADGMLQLQNTS----GNSPAGATKQNQRRE

Query:  ASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEK-----RI
         SG   R               + +  ++++    +  ++  R    ++        +         GK+A  +     E  G S  +EK+E+     RI
Subjt:  ASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEK-----RI

Query:  RNKDRPDRGVWAPRSRSDASVSQLDESSVSQSS
        RNKDRP   ++ P +RS   +   D+S+ S  S
Subjt:  RNKDRPDRGVWAPRSRSDASVSQLDESSVSQSS

Q9FVW4 Regulator of nonsense transcripts UPF32.8e-10947.54Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSL  SDL   ID RFA RYNW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLKVIA+P E+LPSAEIQLER+EAEQSG +K  PI+TPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDVG---TADSGKKKILLLKGKERD-ISHVADGMLQLQNTSGNSPA
        R  EKKKY+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T DSGKKKILLL+ K+RD   +      Q  +T+ +  +
Subjt:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDVG---TADSGKKKILLLKGKERD-ISHVADGMLQLQNTSGNSPA

Query:  GATKQNQRREASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEK
          ++QNQ+ +  G +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                            K+ H     SEK
Subjt:  GATKQNQRREASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEK

Query:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNP
        QE+R RNKDRPDR +WAP  R D S  Q   S+                GE+KD +   R+G+V    S  G ++ENGS RH  RR  G   K++  +  
Subjt:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNP

Query:  NEGKPSKRGVAGG---HEKQVWVQKSSS
         EGK S+RG  GG   HEKQ+W+QK SS
Subjt:  NEGKPSKRGVAGG---HEKQVWVQKSSS

Q9H1J1 Regulator of nonsense transcripts 3A5.1e-1023.26Show/hide
Query:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD
        +KVVIR LPP L    L   +  R    +++  +     S     Y+RAYI+F  P+D+  F + FDG++F++ KG +Y AVVE+AP Q++ +    KKD
Subjt:  TKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSS-TKKD

Query:  GREGTIYKDPDYLEFLKVIAKPAEHL-PSAEIQLERKEAE-QSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKRGMEK
         + G+I  DP+Y +FL+      E    + E  L   EA+ +  +A+ T   TPL+E+++ ++  +   +     R+ +R      ++      +R  E+
Subjt:  GREGTIYKDPDYLEFLKVIAKPAEHL-PSAEIQLERKEAE-QSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKRGMEK

Query:  KKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDI-----SHVADGMLQLQNTSGNSPAGATKQNQRREASGGM
        ++   K++ K     +K   I + ++ ++          +  T +  K+     +G+E D         A G +           G+ ++ Q    SG  
Subjt:  KKYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDI-----SHVADGMLQLQNTSGNSPAGATKQNQRREASGGM

Query:  IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKR-----PPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASE------KQEKR
               ++  H       +   + Q  + D+G+R      P  ++ RS         P   G +   K + +S    + +  L  A         +++R
Subjt:  IRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKR-----PPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASE------KQEKR

Query:  IRNKDRPDRGVWAPRSR
        + NKDRP   ++ P +R
Subjt:  IRNKDRPDRGVWAPRSR

Arabidopsis top hitse value%identityAlignment
AT1G33980.1 Smg-4/UPF3 family protein2.0e-11047.54Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSL  SDL   ID RFA RYNW  +RPGK+S K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQG-SSVPRKVKRGGAASSRKPESNSMK
         S KKD REG+I KDPDYLEFLKVIA+P E+LPSAEIQLER+EAEQSG +K  PI+TPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  SSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDVG---TADSGKKKILLLKGKERD-ISHVADGMLQLQNTSGNSPA
        R  EKKKY+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T DSGKKKILLL+ K+RD   +      Q  +T+ +  +
Subjt:  RGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDVG---TADSGKKKILLLKGKERD-ISHVADGMLQLQNTSGNSPA

Query:  GATKQNQRREASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEK
          ++QNQ+ +  G +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                            K+ H     SEK
Subjt:  GATKQNQRREASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEK

Query:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNP
        QE+R RNKDRPDR +WAP  R D S  Q   S+                GE+KD +   R+G+V    S  G ++ENGS RH  RR  G   K++  +  
Subjt:  QEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNP

Query:  NEGKPSKRGVAGG---HEKQVWVQKSSS
         EGK S+RG  GG   HEKQ+W+QK SS
Subjt:  NEGKPSKRGVAGG---HEKQVWVQKSSS

AT1G33980.2 Smg-4/UPF3 family protein1.9e-10847.17Show/hide
Query:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKT--SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV
        MK+PL++ KVV+RHLPPSL  SDL   ID RFA RYNW  +RPGK+    K+Q+Y+RAY+ F  PEDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRV
Subjt:  MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKT--SQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV

Query:  PRSSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQG-SSVPRKVKRGGAASSRKPESNS
        P+ S KKD REG+I KDPDYLEFLKVIA+P E+LPSAEIQLER+EAEQSG +K  PI+TPLMEF+RQKRA   G QG S + R  +R    S+ KP    
Subjt:  PRSSTKKDGREGTIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQG-SSVPRKVKRGGAASSRKPESNS

Query:  MKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDVG---TADSGKKKILLLKGKERD-ISHVADGMLQLQNTSGNS
         KR  EKKKY+ K+S KN  R+  ++ +   + + + + SSG           I  S  G   T DSGKKKILLL+ K+RD   +      Q  +T+ + 
Subjt:  MKRGMEKKKYILKDSVKNTNRRDKSNFILVPRREDQSATSSG-----------IGISDVG---TADSGKKKILLLKGKERD-ISHVADGMLQLQNTSGNS

Query:  PAGATKQNQRREASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNAS
         +  ++QNQ+ +  G +I+ ILL N++R  QSS+  QS Q+++   ++N KRP RP N R+G                            K+ H     S
Subjt:  PAGATKQNQRREASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNAS

Query:  EKQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSL
        EKQE+R RNKDRPDR +WAP  R D S  Q   S+                GE+KD +   R+G+V    S  G ++ENGS RH  RR  G   K++  +
Subjt:  EKQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSL

Query:  NPNEGKPSKRGVAGG---HEKQVWVQKSSS
           EGK S+RG  GG   HEKQ+W+QK SS
Subjt:  NPNEGKPSKRGVAGG---HEKQVWVQKSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACCCATTGGAGAGGACCAAAGTAGTCATTAGGCACTTGCCCCCTTCTCTCCCTCACTCAGATCTCTTCCACCATATTGATGATCGATTCGCCGGTCGCTACAA
TTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGGTACGCTCGAGCCTACATAGATTTTACGAGACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTTG
ATGGCCATGTTTTTGTTAACGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAGTATGCACCTTCACAGCGTGTTCCCAGATCATCTACCAAAAAGGATGGTCGTGAGGGG
ACTATATACAAAGATCCAGATTATTTGGAGTTTCTCAAAGTCATTGCAAAGCCTGCCGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGAAAAGAAGCAGAGCAATC
TGGTGTTGCAAAAGAAACTCCAATTATTACCCCTCTCATGGAATTTGTTCGCCAGAAACGAGCCGTTGAAAGCGGAAGTCAGGGATCTTCAGTACCTCGGAAGGTTAAAA
GAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCAAATTCCATGAAGCGAGGCATGGAGAAGAAGAAGTATATTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGAC
AAGTCAAATTTCATTTTGGTGCCCAGGCGAGAGGATCAGTCAGCCACTTCAAGTGGAATTGGAATTTCTGATGTTGGTACAGCTGACTCTGGAAAGAAAAAAATTCTGCT
TCTCAAGGGGAAAGAGCGAGATATATCTCATGTTGCTGATGGCATGTTACAGTTGCAGAACACATCTGGGAATTCTCCTGCTGGTGCTACAAAGCAGAATCAGAGGCGTG
AGGCTAGTGGAGGCATGATCAGAAGCATTCTTTTAAATAATGAAGCGCGTCACGGACAGAGTTCATCAGTAGCCCAGTCTCATCAAAAAATTCAGATCCTGAACTCAGAC
AATGGGAAGCGACCACCTCGTCCCATTAATGCTCGATCTGGGTCTAATGATATGTCCAATAATGAGCCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTCCAGA
AAGCAAGTTTAGTAAAAAGGAACTTCATGGCCTGAGTAATGCTAGTGAGAAGCAAGAAAAACGAATAAGAAACAAAGATAGGCCTGATCGTGGGGTCTGGGCGCCACGTA
GTCGTTCAGATGCCTCAGTCTCACAACTTGATGAATCCTCTGTTTCACAATCTAGTCATTTGGTTTCTGACTCAGTTGAAGCATACCGTGGGGAAATGAAAGATGATATT
CATGGAAGCCGGACTGGGGATGTTACAACCACTGTGAGTGGACGTGGCAGTTCAGTGGAGAATGGTTCTGTTAGACATGTTGGACGTCGTGGGGCCGGCCATGTAATGAA
GGATGATGGGTCTTTAAACCCAAATGAAGGCAAGCCATCCAAAAGAGGTGTTGCTGGTGGCCACGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGAAATATGGAAAA
AAAAATTGGTGGCCGGAAAAGTCATCGGCGATCGCTGGAAAAGTCGTCGGCGGTCGTCGGAAACTTCGCCGGCTGACGGCGGTCGGCGGTCGTCGGAAAAGTCAAGGAGT
CGCATGCAAGAAGTAATGTATTGTTCTCCATTGAATCATGACGATGTGTATGCTGTCCAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGA
TTGTCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTTATAGGTTTCGTGAACTGGATT
GCAAGATTTGCAATTGTTTCGTCGTATACAGGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGACCCATTGGAGAGGACCAAAGTAGTCATTAGGCACTTGCCCCCTTCTCTCCCTCACTCAGATCTCTTCCACCATATTGATGATCGATTCGCCGGTCGCTACAA
TTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGGTACGCTCGAGCCTACATAGATTTTACGAGACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTTG
ATGGCCATGTTTTTGTTAACGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAGTATGCACCTTCACAGCGTGTTCCCAGATCATCTACCAAAAAGGATGGTCGTGAGGGG
ACTATATACAAAGATCCAGATTATTTGGAGTTTCTCAAAGTCATTGCAAAGCCTGCCGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGAAAAGAAGCAGAGCAATC
TGGTGTTGCAAAAGAAACTCCAATTATTACCCCTCTCATGGAATTTGTTCGCCAGAAACGAGCCGTTGAAAGCGGAAGTCAGGGATCTTCAGTACCTCGGAAGGTTAAAA
GAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCAAATTCCATGAAGCGAGGCATGGAGAAGAAGAAGTATATTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGAC
AAGTCAAATTTCATTTTGGTGCCCAGGCGAGAGGATCAGTCAGCCACTTCAAGTGGAATTGGAATTTCTGATGTTGGTACAGCTGACTCTGGAAAGAAAAAAATTCTGCT
TCTCAAGGGGAAAGAGCGAGATATATCTCATGTTGCTGATGGCATGTTACAGTTGCAGAACACATCTGGGAATTCTCCTGCTGGTGCTACAAAGCAGAATCAGAGGCGTG
AGGCTAGTGGAGGCATGATCAGAAGCATTCTTTTAAATAATGAAGCGCGTCACGGACAGAGTTCATCAGTAGCCCAGTCTCATCAAAAAATTCAGATCCTGAACTCAGAC
AATGGGAAGCGACCACCTCGTCCCATTAATGCTCGATCTGGGTCTAATGATATGTCCAATAATGAGCCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTCCAGA
AAGCAAGTTTAGTAAAAAGGAACTTCATGGCCTGAGTAATGCTAGTGAGAAGCAAGAAAAACGAATAAGAAACAAAGATAGGCCTGATCGTGGGGTCTGGGCGCCACGTA
GTCGTTCAGATGCCTCAGTCTCACAACTTGATGAATCCTCTGTTTCACAATCTAGTCATTTGGTTTCTGACTCAGTTGAAGCATACCGTGGGGAAATGAAAGATGATATT
CATGGAAGCCGGACTGGGGATGTTACAACCACTGTGAGTGGACGTGGCAGTTCAGTGGAGAATGGTTCTGTTAGACATGTTGGACGTCGTGGGGCCGGCCATGTAATGAA
GGATGATGGGTCTTTAAACCCAAATGAAGGCAAGCCATCCAAAAGAGGTGTTGCTGGTGGCCACGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGAAATATGGAAAA
AAAAATTGGTGGCCGGAAAAGTCATCGGCGATCGCTGGAAAAGTCGTCGGCGGTCGTCGGAAACTTCGCCGGCTGACGGCGGTCGGCGGTCGTCGGAAAAGTCAAGGAGT
CGCATGCAAGAAGTAATGTATTGTTCTCCATTGAATCATGACGATGTGTATGCTGTCCAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGA
TTGTCTCCATTCTGAGGACTTAATGCACATCCTCAGAAGGCATCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTTATAGGTTTCGTGAACTGGATT
GCAAGATTTGCAATTGTTTCGTCGTATACAGGTGGTAA
Protein sequenceShow/hide protein sequence
MKDPLERTKVVIRHLPPSLPHSDLFHHIDDRFAGRYNWSYYRPGKTSQKDQRYARAYIDFTRPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREG
TIYKDPDYLEFLKVIAKPAEHLPSAEIQLERKEAEQSGVAKETPIITPLMEFVRQKRAVESGSQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRD
KSNFILVPRREDQSATSSGIGISDVGTADSGKKKILLLKGKERDISHVADGMLQLQNTSGNSPAGATKQNQRREASGGMIRSILLNNEARHGQSSSVAQSHQKIQILNSD
NGKRPPRPINARSGSNDMSNNEPNPSGSEGDGKRAPESKFSKKELHGLSNASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLDESSVSQSSHLVSDSVEAYRGEMKDDI
HGSRTGDVTTTVSGRGSSVENGSVRHVGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSEIWKKKLVAGKVIGDRWKSRRRSSETSPADGGRRSSEKSRS
RMQEVMYCSPLNHDDVYAVQQIMASRQDYGSSNFQGDCLHSEDLMHILRRHHHVKWRYALEAVGNSYRFRELDCKICNCFVVYRW