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Lag0039766 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039766
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:49554799..49556264
RNA-Seq ExpressionLag0039766
SyntenyLag0039766
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.2e-1737.04Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        A+N++F L D P   ++E +   +   L   +  V + GA+W +S     +   + L   A  W  F+K   LPTTH  TVS+DR+LL+ ++L   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARLQRTQE
        G++I SEI  C  +K G LF  + IT LC  A  P   N+  L + G ID   +AR+  TQE
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-1831.86Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        A+N++F L D P   ++E +   +   L   +  V   GA+W +S     +   + L   A  W  F+K R LPTTH  TVS+DR+LL+ ++L   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGMHQILEQLQLSA
        G++I SEI  C  +K G LF  + IT LC  A  P   N+  L + G ID   +AR+      + TQ+            R  G +    + LEQ     
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGMHQILEQLQLSA

Query:  SMQEY--------AERQAQTYWTYAK
         +Q+Y          +Q Q +W Y+K
Subjt:  SMQEY--------AERQAQTYWTYAK

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.6e-1833.49Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        A+N++F L D P   ++E +   +  +L   +  V   GA+W +S     +   + L   A  W  F+K R LPTTH   VS+DR+LL+ ++L   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQE-----------ARQGGLVCGMHQILEQLQLSA
        G++I SEI  C  +K G LF  + IT LC  A  P   N+  L + G ID   +AR+      + TQ+           +R  G V    Q L+ L+   
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQE-----------ARQGGLVCGMHQILEQLQLSA

Query:  SMQEYAERQAQTYWTYAK
        S QE+  +Q Q +W Y+K
Subjt:  SMQEYAERQAQTYWTYAK

TYG37159.1 hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]2.9e-1739.57Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        +VN LFNL D     Y  M    S D L   +  V   G+QW + K    S +  YLK  A  W  FV+  F+P  H ST+S +++LL++ IL   SI++
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN
        GK+I  EIH+C   K G  +  + IT LC RA V T  N
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]8.0e-2041.01Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        ++N LFNL D     Y  M+   + D L   +  V   G+QW + K    S +  YLK  AN W  FV+  F+P +H  T+S +R+LL++AIL   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN
        GK+I  EIHNC  KK G ++  + IT LC +A V T  N
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-1737.04Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        A+N++F L D P   ++E +   +   L   +  V + GA+W +S     +   + L   A  W  F+K   LPTTH  TVS+DR+LL+ ++L   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARLQRTQE
        G++I SEI  C  +K G LF  + IT LC  A  P   N+  L + G ID   +AR+  TQE
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1831.86Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        A+N++F L D P   ++E +   +   L   +  V   GA+W +S     +   + L   A  W  F+K R LPTTH  TVS+DR+LL+ ++L   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGMHQILEQLQLSA
        G++I SEI  C  +K G LF  + IT LC  A  P   N+  L + G ID   +AR+      + TQ+            R  G +    + LEQ     
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGMHQILEQLQLSA

Query:  SMQEY--------AERQAQTYWTYAK
         +Q+Y          +Q Q +W Y+K
Subjt:  SMQEY--------AERQAQTYWTYAK

A0A2P5DXM3 Uncharacterized protein1.3e-1833.49Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        A+N++F L D P   ++E +   +  +L   +  V   GA+W +S     +   + L   A  W  F+K R LPTTH   VS+DR+LL+ ++L   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQE-----------ARQGGLVCGMHQILEQLQLSA
        G++I SEI  C  +K G LF  + IT LC  A  P   N+  L + G ID   +AR+      + TQ+           +R  G V    Q L+ L+   
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARL------QRTQE-----------ARQGGLVCGMHQILEQLQLSA

Query:  SMQEYAERQAQTYWTYAK
        S QE+  +Q Q +W Y+K
Subjt:  SMQEYAERQAQTYWTYAK

A0A5D1ZYC3 Uncharacterized protein1.4e-1739.57Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        +VN LFNL D     Y  M    S D L   +  V   G+QW + K    S +  YLK  A  W  FV+  F+P  H ST+S +++LL++ IL   SI++
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN
        GK+I  EIH+C   K G  +  + IT LC RA V T  N
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN

A0A5D2MA47 Uncharacterized protein3.9e-2041.01Show/hide
Query:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV
        ++N LFNL D     Y  M+   + D L   +  V   G+QW + K    S +  YLK  AN W  FV+  F+P +H  T+S +R+LL++AIL   SI+V
Subjt:  AVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVLLVFAILRSPSIDV

Query:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN
        GK+I  EIHNC  KK G ++  + IT LC +A V T  N
Subjt:  GKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACAAGAGGGAGGAGAGAAAGAGATACGGAGGAAGAGAAAGTGTCGATTACTCTTGAGGCACCGAAGACAAGAACGAAGAGAAGGAAGACATCGGAAGAGAG
AGATGCCAATAGACGAAGACAACAACAGCGAGCTGAGGGAAAAGAAAAGCTAGTAGAAGATGTGCAAGGACAAGGTAATGGTCAGGAACAACAGACTCAAGAAGTTGTGC
CGGAGATTCAACGTCGTTGCCACCGCAAGCAAAAGGCGGGACAAATTAAGGTGATCAGGACATACACTCCATCTCCGTCAACGACAGAATCTGAGAAAGAAAATTATGAG
AAAGAAGAGCAAGAGAAAGAAGAGGCTGAGAAAAAGGCGGAAGAAGAAGCTCAGACGAAGTACCCAGGTGCAGTAAACTCTCTATTCAATCTTCAAGATTTCCCCCACGC
TGGTTACAATGAGATGGTGGTAGCACCATCTAATGATCAACTGAATGCGGCTGTGAGAGAAGTTGAGATTGAAGGGGCTCAGTGGAGGTTGTCGAAGACAGAGAAGCGCT
CTTTTCAGGCCGCATACTTGAAGAGCGAAGCAAACACCTGGTTGGGCTTTGTCAAACTCCGTTTTCTACCAACAACCCATGATTCTACAGTCTCTCGTGACAGAGTGCTT
CTGGTGTTCGCAATTCTGAGGTCCCCGAGTATTGATGTTGGTAAGGTAATTTCTAGTGAAATCCACAACTGCTGGGGTAAAAAGGTGGGCAAATTATTTTTACAAAACAC
CATTACGATGCTGTGCAATAGGGCAGGGGTGCCCACGACTCCAAACGATATCATTTTGCTTGACAAGGGGATTATTGACACGCCCAATCTAGCGAGGCTTCAGCGGACTC
AAGAAGCTCGACAAGGGGGGCTAGTGTGTGGCATGCATCAAATTCTAGAGCAACTTCAACTTTCGGCCAGTATGCAAGAGTATGCTGAGAGGCAAGCTCAGACCTACTGG
ACCTATGCTAAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACAAGAGGGAGGAGAGAAAGAGATACGGAGGAAGAGAAAGTGTCGATTACTCTTGAGGCACCGAAGACAAGAACGAAGAGAAGGAAGACATCGGAAGAGAG
AGATGCCAATAGACGAAGACAACAACAGCGAGCTGAGGGAAAAGAAAAGCTAGTAGAAGATGTGCAAGGACAAGGTAATGGTCAGGAACAACAGACTCAAGAAGTTGTGC
CGGAGATTCAACGTCGTTGCCACCGCAAGCAAAAGGCGGGACAAATTAAGGTGATCAGGACATACACTCCATCTCCGTCAACGACAGAATCTGAGAAAGAAAATTATGAG
AAAGAAGAGCAAGAGAAAGAAGAGGCTGAGAAAAAGGCGGAAGAAGAAGCTCAGACGAAGTACCCAGGTGCAGTAAACTCTCTATTCAATCTTCAAGATTTCCCCCACGC
TGGTTACAATGAGATGGTGGTAGCACCATCTAATGATCAACTGAATGCGGCTGTGAGAGAAGTTGAGATTGAAGGGGCTCAGTGGAGGTTGTCGAAGACAGAGAAGCGCT
CTTTTCAGGCCGCATACTTGAAGAGCGAAGCAAACACCTGGTTGGGCTTTGTCAAACTCCGTTTTCTACCAACAACCCATGATTCTACAGTCTCTCGTGACAGAGTGCTT
CTGGTGTTCGCAATTCTGAGGTCCCCGAGTATTGATGTTGGTAAGGTAATTTCTAGTGAAATCCACAACTGCTGGGGTAAAAAGGTGGGCAAATTATTTTTACAAAACAC
CATTACGATGCTGTGCAATAGGGCAGGGGTGCCCACGACTCCAAACGATATCATTTTGCTTGACAAGGGGATTATTGACACGCCCAATCTAGCGAGGCTTCAGCGGACTC
AAGAAGCTCGACAAGGGGGGCTAGTGTGTGGCATGCATCAAATTCTAGAGCAACTTCAACTTTCGGCCAGTATGCAAGAGTATGCTGAGAGGCAAGCTCAGACCTACTGG
ACCTATGCTAAAAGATAG
Protein sequenceShow/hide protein sequence
MAKTRGRRERDTEEEKVSITLEAPKTRTKRRKTSEERDANRRRQQQRAEGKEKLVEDVQGQGNGQEQQTQEVVPEIQRRCHRKQKAGQIKVIRTYTPSPSTTESEKENYE
KEEQEKEEAEKKAEEEAQTKYPGAVNSLFNLQDFPHAGYNEMVVAPSNDQLNAAVREVEIEGAQWRLSKTEKRSFQAAYLKSEANTWLGFVKLRFLPTTHDSTVSRDRVL
LVFAILRSPSIDVGKVISSEIHNCWGKKVGKLFLQNTITMLCNRAGVPTTPNDIILLDKGIIDTPNLARLQRTQEARQGGLVCGMHQILEQLQLSASMQEYAERQAQTYW
TYAKR