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Lag0039778 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039778
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 reverse transcriptase-like
Genome locationchr2:49704550..49704948
RNA-Seq ExpressionLag0039778
SyntenyLag0039778
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70431.1 hypothetical protein VITISV_030910 [Vitis vinifera]7.3e-2547.86Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ VA  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
CAN75040.1 hypothetical protein VITISV_026478 [Vitis vinifera]1.2e-2447.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
RVW39368.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.2e-2447.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.2e-2447.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
RVX11537.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.2e-2447.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
TrEMBL top hitse value%identityAlignment
A0A438DVQ8 LINE-1 retrotransposable element ORF2 protein6.0e-2547.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
A0A438FWU5 LINE-1 retrotransposable element ORF2 protein6.0e-2547.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
A0A438JRF4 LINE-1 retrotransposable element ORF2 protein6.0e-2547.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
A5BQI4 Reverse transcriptase domain-containing protein3.5e-2547.86Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ VA  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
A5BV95 Reverse transcriptase domain-containing protein6.0e-2547.01Show/hide
Query:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY
        ++F Q  GL IN  KS +  IN  +  L  L S + C++ +WP +YLGL  GGNPK   FW PV+ERI R+L  WK +Y+S GGR TLI++ LS++P Y+
Subjt:  IIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYY

Query:  LSLYKLPSKVAKVLDKL
        LSL+K+P+ +A  ++K+
Subjt:  LSLYKLPSKVAKVLDKL
SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657509.6e-0435.19Show/hide
Query:  VIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYYLSLYKLPSKVAKVLDKL
        ++ER+  ++  W+   +S  GR TL +A LS+MP++ +S   LP  +   LD+L
Subjt:  VIERIQRKLHSWKYSYISKGGRYTLIRASLSNMPIYYLSLYKLPSKVAKVLDKL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACTTTATTATTTTCTACATCTTATTCTTCAATTATGGATAATCTTCGAGCAGGCATTTGGGTTGAACATAAATTTTGGCAAAAGTGAATTATTGGAGATTAATGT
TGATGAGCTGCAATTGGAAGTTTTGAAATCGAAATATGGTTGCAAACTTGGAGATTGGCCAACAACTTATCTTGGTCTTCTTTTTGGGGGAAACCCAAAATTACCATCGT
TTTGGCATCCAGTGATTGAGAGGATTCAAAGAAAGCTTCACAGTTGGAAGTATTCGTACATTTCAAAAGGTGGTAGATATACTCTAATTCGAGCTTCTTTGTCCAACATG
CCCATTTATTATCTCTCTTTGTATAAACTACCTTCAAAGGTGGCCAAAGTTTTGGATAAGCTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATACTTTATTATTTTCTACATCTTATTCTTCAATTATGGATAATCTTCGAGCAGGCATTTGGGTTGAACATAAATTTTGGCAAAAGTGAATTATTGGAGATTAATGT
TGATGAGCTGCAATTGGAAGTTTTGAAATCGAAATATGGTTGCAAACTTGGAGATTGGCCAACAACTTATCTTGGTCTTCTTTTTGGGGGAAACCCAAAATTACCATCGT
TTTGGCATCCAGTGATTGAGAGGATTCAAAGAAAGCTTCACAGTTGGAAGTATTCGTACATTTCAAAAGGTGGTAGATATACTCTAATTCGAGCTTCTTTGTCCAACATG
CCCATTTATTATCTCTCTTTGTATAAACTACCTTCAAAGGTGGCCAAAGTTTTGGATAAGCTCATTTGA
Protein sequenceShow/hide protein sequence
MILYYFLHLILQLWIIFEQAFGLNINFGKSELLEINVDELQLEVLKSKYGCKLGDWPTTYLGLLFGGNPKLPSFWHPVIERIQRKLHSWKYSYISKGGRYTLIRASLSNM
PIYYLSLYKLPSKVAKVLDKLI