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Lag0039781 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039781
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:49750675..49751214
RNA-Seq ExpressionLag0039781
SyntenyLag0039781
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_042939400.1 uncharacterized protein LOC122274425 [Carya illinoinensis]4.4e-1732.95Show/hide
Query:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD
        D +  I+  LK+T EE+     LPEE  +  K R ++ +       + +  E F S M K+WN E  I  K +GFN FL +F+    KR V +  PW FD
Subjt:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD

Query:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
        + LI +K+   D++ +++ F    FW+  H +P+A  + +    +GS++G V  V+  +++   WG  LRI+V
Subjt:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

XP_042942919.1 uncharacterized protein LOC122277105 [Carya illinoinensis]4.4e-1731.79Show/hide
Query:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD
        D +  I+  LK+T EE+     LPEE  +  K + ++ +       + +  E F S M K+WN E  I  K +GFN FL +F+    KR V +  PW FD
Subjt:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD

Query:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
        + LI +K+   D++ +++ F    FW+  H +P+A  + +    +GS++G V  V+  +++   WG  LR++V
Subjt:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

XP_042952204.1 uncharacterized protein LOC122289286 [Carya illinoinensis]5.3e-1834.1Show/hide
Query:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD
        D +  I+  LK+T EE+     LPEE ++  K R ++ +       + +  E F S M K+WN E  I  K +GFN FL +F+    KR V +  PW FD
Subjt:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD

Query:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
        + LI MK+   D++ +E+ F+   FW+  H +P+A  + +    +GS++G V  V+  +++   WG  LRI+V
Subjt:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

XP_042958101.1 uncharacterized protein LOC122293641 [Carya illinoinensis]4.4e-1733.53Show/hide
Query:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD
        D +  I+  LK+T EE+     LPEE ++  K R ++ +       + +  E F S M K+WN E  I  K +GFN FL +++    KR V +  PW FD
Subjt:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD

Query:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
          LI MK+   D++ +E+ F+   FW+  H +P+A  + +    +GS++G V +V+  +++   WG  LRI+V
Subjt:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

XP_042980043.1 uncharacterized protein LOC122310226 [Carya illinoinensis]5.8e-1732.95Show/hide
Query:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD
        D +  I+  LK+T EE+     LPEE  +  K R ++ +       + +  E F S M K+WN E  I  K +GFN FL +F+    KR V +  PW FD
Subjt:  DIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFFD

Query:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
        + LI +K+   D++ +++ F    FW+  H +P+A  + +    +GS++G V  V+  +++   WG  LRI+V
Subjt:  KALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

TrEMBL top hitse value%identityAlignment
A0A5C7H9Y2 CCHC-type domain-containing protein1.8e-1634.48Show/hide
Query:  EKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIW-NQEQTIIGKMGFNLFLCKFKNAHIKRWVKEAGPWFFDKALILMKEPSVDISGDEMEFEYVSFWIH
        E+ +Q L+ +L+ K  T K I  E F S +  IW  + +  +  MG N+F  +F+N   ++ + E GPW FDK L++++E S      +++F YV FWI 
Subjt:  EKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIW-NQEQTIIGKMGFNLFLCKFKNAHIKRWVKEAGPWFFDKALILMKEPSVDISGDEMEFEYVSFWIH

Query:  FHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
         H LP A  +R+    +G L+G V+++D  E  + +  F +RI+V
Subjt:  FHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X19.0e-1634.38Show/hide
Query:  EDIILKIFEDLKVTAEER--------ANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGKMGFNLFLCKFKNAHIKRWVK
        ++++ ++ E LK+T EE+           + + E+++E   ++   +L+CK+ T K IP E+F + MP+IW      I  +G NLFLCKFK    K  + 
Subjt:  EDIILKIFEDLKVTAEER--------ANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGKMGFNLFLCKFKNAHIKRWVK

Query:  EAGPWFFDKALILMKEPSVDISGDEMEF
          GPWFFDK++++++EP  + + +E+EF
Subjt:  EAGPWFFDKALILMKEPSVDISGDEMEF

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X29.0e-1634.38Show/hide
Query:  EDIILKIFEDLKVTAEER--------ANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGKMGFNLFLCKFKNAHIKRWVK
        ++++ ++ E LK+T EE+           + + E+++E   ++   +L+CK+ T K IP E+F + MP+IW      I  +G NLFLCKFK    K  + 
Subjt:  EDIILKIFEDLKVTAEER--------ANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGKMGFNLFLCKFKNAHIKRWVK

Query:  EAGPWFFDKALILMKEPSVDISGDEMEF
          GPWFFDK++++++EP  + + +E+EF
Subjt:  EAGPWFFDKALILMKEPSVDISGDEMEF

A0A6J1DU55 uncharacterized protein LOC1110231351.8e-1632Show/hide
Query:  EEDIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQE-QTIIGKMGFNLFLCKFKNAHIKRWVKEAGPWF
        + + +L  ++  K+T+EE      +  + ++ ++Q L  +L+ K+  K+ I  ++    +   W  E Q  +  +G NLFL  F        V + GPWF
Subjt:  EEDIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQE-QTIIGKMGFNLFLCKFKNAHIKRWVKEAGPWF

Query:  FDKALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
        FDKALI++++P    +  E+EF  V+FWIH   LP ++ ++  A  +G+ +G    VD N E+   WG SLRI+V
Subjt:  FDKALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

A0A6P9E2G0 uncharacterized protein LOC1183446889.0e-1631.03Show/hide
Query:  EDIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFF
        E+ I  + + LK+T EE+   Y L EE++  S+    + L+  +   +++    F + M ++WN E  I  K +G N FL KF N  ++  V  + PW F
Subjt:  EDIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGK-MGFNLFLCKFKNAHIKRWVKEAGPWFF

Query:  DKALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV
        D+ LI ++E    ++  +++F    FW+  H LP+A  ++++   +G+  G V  VD+ +E+ + WG  LR+KV
Subjt:  DKALILMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAAGCAAAGAGGAAGATATTATCCTAAAAATTTTTGAAGATTTAAAAGTTACAGCGGAGGAAAGGGCTAACACCTATCAATTGCCAGAAGAGGATCTGGAGAA
ATCAAAGCAAAGGCTGACTAATGCTCTTCTATGCAAGATGTTTACAAAAAAGAAAATTCCCCCGGAGATGTTTATATCAAAAATGCCAAAGATATGGAACCAGGAGCAGA
CCATTATTGGAAAAATGGGTTTTAATCTATTTCTATGCAAGTTCAAGAATGCGCATATCAAAAGATGGGTAAAAGAAGCGGGTCCATGGTTTTTTGATAAAGCTCTAATT
CTGATGAAGGAGCCAAGTGTAGACATAAGCGGCGACGAAATGGAGTTCGAGTATGTGTCATTTTGGATTCATTTTCATAAGCTTCCATATGCCTATTTTTCTAGGAAATC
AGCCACGACTATTGGCAGCCTTCTCGGTTTAGTGGAACAAGTGGATCTTAACGAGGAAGAGGATCAAATGTGGGGATTTTCTTTAAGAATTAAAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAAGCAAAGAGGAAGATATTATCCTAAAAATTTTTGAAGATTTAAAAGTTACAGCGGAGGAAAGGGCTAACACCTATCAATTGCCAGAAGAGGATCTGGAGAA
ATCAAAGCAAAGGCTGACTAATGCTCTTCTATGCAAGATGTTTACAAAAAAGAAAATTCCCCCGGAGATGTTTATATCAAAAATGCCAAAGATATGGAACCAGGAGCAGA
CCATTATTGGAAAAATGGGTTTTAATCTATTTCTATGCAAGTTCAAGAATGCGCATATCAAAAGATGGGTAAAAGAAGCGGGTCCATGGTTTTTTGATAAAGCTCTAATT
CTGATGAAGGAGCCAAGTGTAGACATAAGCGGCGACGAAATGGAGTTCGAGTATGTGTCATTTTGGATTCATTTTCATAAGCTTCCATATGCCTATTTTTCTAGGAAATC
AGCCACGACTATTGGCAGCCTTCTCGGTTTAGTGGAACAAGTGGATCTTAACGAGGAAGAGGATCAAATGTGGGGATTTTCTTTAAGAATTAAAGTGTAG
Protein sequenceShow/hide protein sequence
MAASKEEDIILKIFEDLKVTAEERANTYQLPEEDLEKSKQRLTNALLCKMFTKKKIPPEMFISKMPKIWNQEQTIIGKMGFNLFLCKFKNAHIKRWVKEAGPWFFDKALI
LMKEPSVDISGDEMEFEYVSFWIHFHKLPYAYFSRKSATTIGSLLGLVEQVDLNEEEDQMWGFSLRIKV