CuGenDBv2

Gene ID	Lag0039829
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ribosomal protein L5 B isoform 1
Genome location	chr13:273791..274398
RNA-Seq Expression	Lag0039829
Synteny	Lag0039829
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7032370.1 hypothetical protein SDJN02_06415, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.0e-42

81.2

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Query:  MAHSLSSVSATAALSCSTRFSNIRC-SCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK
        MAHSLSS+SATA  + + RFSN RC SCLRLPNLQ RS ACN+ + SHLISRRNAALILTGA+LGL N V +SAEAAARRPPPPPPQEKKDPNLSGVQAK
Subjt:  MAHSLSSVSATAALSCSTRFSNIRC-SCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK

Query:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        VLAS+KRKEAMKEA AKLRE+GK  AVDQPPPE
Subjt:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

XP_004135338.1 uncharacterized protein LOC101217329 [Cucumis sativus]

7.3e-41

77.78

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Query:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ
        MAHSLSS+SA    TA LS S RFSN +CS  RLPN Q  SNACNE   ++LISRRN ALILTG +LG+NVVDR AEAAARRPPPPPPQEKKDPNLSGVQ
Subjt:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ

Query:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        AKVLASKKRKEA+KEATAKLR KGK   VDQPPPE
Subjt:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

XP_022956419.1 uncharacterized protein LOC111458160 [Cucurbita moschata]

1.7e-42

81.95

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Query:  MAHSLSSVSATAALSCSTRFSNIRC-SCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK
        MAHSLSS+SATA  + + RFSN RC SCLRLPNLQ RS ACN+ + SHLISRRNAALILTGA+LGL NVV +SAEAAARRPPPPPPQEKKDPNLSGVQAK
Subjt:  MAHSLSSVSATAALSCSTRFSNIRC-SCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK

Query:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        VLAS+KRKEAMKEA AKLRE+GK  AVDQPPPE
Subjt:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

XP_022998742.1 uncharacterized protein LOC111493312 [Cucurbita maxima]

5.0e-42

81.2

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Query:  MAHSLSSVSATAALSCSTRFSNIRCS-CLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK
        MAHSLSS+SATA  + + RFSN RCS CLRLPNLQ RS+ACN+ + +HLISRRNAALILTGA+LGL NVV +SAEAAARRPPPPPPQEKKDPNLSGVQAK
Subjt:  MAHSLSSVSATAALSCSTRFSNIRCS-CLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK

Query:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        VLAS+KRKEAMKEA AKLRE+GK  AVDQPPPE
Subjt:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

XP_038877882.1 uncharacterized protein LOC120070100 [Benincasa hispida]

2.4e-44

82.22

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Query:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ
        MAHSLSS+SA    TAALS STR S ++CS  RLPNLQ RSNACN    SHLISRRNA LILTGA+LGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ
Subjt:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ

Query:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        AKVLASKKRKEA+KEATAKLR KGK   VDQPPPE
Subjt:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPU5 Uncharacterized protein

3.5e-41

77.78

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Query:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ
        MAHSLSS+SA    TA LS S RFSN +CS  RLPN Q  SNACNE   ++LISRRN ALILTG +LG+NVVDR AEAAARRPPPPPPQEKKDPNLSGVQ
Subjt:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ

Query:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        AKVLASKKRKEA+KEATAKLR KGK   VDQPPPE
Subjt:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

A0A1S3BE14 uncharacterized protein LOC103488868

1.7e-40

77.04

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Query:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ
        MAHSLSS+SA    TA +S S RFSN +CS  RLPN Q RSNA N+   S+LISRRN ALILTG +LG+NVVDRSAEAAARRPPPPPP+EKKDPNLSGVQ
Subjt:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ

Query:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        AKVLASKKRKEA+KEATAKLR KGK   VDQPPPE
Subjt:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

A0A5A7SY24 Uncharacterized protein

1.7e-40

77.04

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Query:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ
        MAHSLSS+SA    TA +S S RFSN +CS  RLPN Q RSNA N+   S+LISRRN ALILTG +LG+NVVDRSAEAAARRPPPPPP+EKKDPNLSGVQ
Subjt:  MAHSLSSVSA----TAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQ

Query:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        AKVLASKKRKEA+KEATAKLR KGK   VDQPPPE
Subjt:  AKVLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

A0A6J1GYZ4 uncharacterized protein LOC111458160

8.4e-43

81.95

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Query:  MAHSLSSVSATAALSCSTRFSNIRC-SCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK
        MAHSLSS+SATA  + + RFSN RC SCLRLPNLQ RS ACN+ + SHLISRRNAALILTGA+LGL NVV +SAEAAARRPPPPPPQEKKDPNLSGVQAK
Subjt:  MAHSLSSVSATAALSCSTRFSNIRC-SCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK

Query:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        VLAS+KRKEAMKEA AKLRE+GK  AVDQPPPE
Subjt:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

A0A6J1K8T5 uncharacterized protein LOC111493312

2.4e-42

81.2

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Query:  MAHSLSSVSATAALSCSTRFSNIRCS-CLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK
        MAHSLSS+SATA  + + RFSN RCS CLRLPNLQ RS+ACN+ + +HLISRRNAALILTGA+LGL NVV +SAEAAARRPPPPPPQEKKDPNLSGVQAK
Subjt:  MAHSLSSVSATAALSCSTRFSNIRCS-CLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGL-NVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAK

Query:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE
        VLAS+KRKEAMKEA AKLRE+GK  AVDQPPPE
Subjt:  VLASKKRKEAMKEATAKLREKGKAVAVDQPPPE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21500.1 unknown protein

1.1e-15

47.37

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Query:  MMAHSLSSVSATAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHL--ISRRNAALILTGAVLGLNVV--DRSAEAAARRPPPPPPQEKKDPNLSGV
        M+AHSL  +S  A                RL +  PRS     P    +  I+RR   + L GA+   N +     A AAARRPPPPPP+EKKDP ++GV
Subjt:  MMAHSLSSVSATAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHL--ISRRNAALILTGAVLGLNVV--DRSAEAAARRPPPPPPQEKKDPNLSGV

Query:  QAKVLASKKRKEAMKEATAKLREKGKAVAVDQP
        QAKVLASKKRKE MK + AKLREKGK V   +P
Subjt:  QAKVLASKKRKEAMKEATAKLREKGKAVAVDQP

Sequences

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CDS sequence

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ATGATGGCACATTCATTATCTTCAGTATCGGCCACAGCCGCCCTCTCATGCTCCACCAGATTCAGCAACATTCGATGTTCCTGTCTAAGGCTTCCAAATCTGCAGCCTCG
CAGCAACGCATGCAATGAACCTTCAAGCAGCCATCTCATCTCCCGCAGGAACGCCGCCTTGATCTTGACAGGAGCAGTGCTTGGACTGAATGTAGTTGACCGGAGTGCAG
AAGCGGCTGCCAGAAGGCCGCCGCCTCCTCCACCGCAGGAGAAGAAGGATCCCAATCTGAGTGGAGTGCAGGCAAAAGTACTAGCTAGCAAAAAGAGGAAGGAAGCCATG
AAAGAAGCTACGGCCAAGCTAAGAGAGAAAGGGAAGGCTGTTGCTGTTGACCAGCCACCACCTGAATAG

mRNA sequence

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Protein sequence

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MMAHSLSSVSATAALSCSTRFSNIRCSCLRLPNLQPRSNACNEPSSSHLISRRNAALILTGAVLGLNVVDRSAEAAARRPPPPPPQEKKDPNLSGVQAKVLASKKRKEAM
KEATAKLREKGKAVAVDQPPPE

Lag0039829 (gene) of Sponge gourd (AG-4) v1 genome