| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008446018.1 PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Cucumis melo] | 3.3e-202 | 96.51 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_022151978.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Momordica charantia] | 4.3e-202 | 97.95 | Show/hide |
Query: PSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDL
PSEG NALATVGPRPMEWSTVPY APQGPGPNGKQRTSSLES IMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDL
Subjt: PSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDL
Query: HWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN
HWTTDG QIV+ASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN
Subjt: HWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN
Query: DVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
DVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
Subjt: DVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
Query: SRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
SRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: SRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_022945717.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita moschata] | 5.4e-205 | 97.97 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_022966914.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita maxima] | 2.1e-204 | 97.67 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLL GHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| XP_023542336.1 U5 small nuclear ribonucleoprotein 40 kDa protein [Cucurbita pepo subsp. pepo] | 1.6e-204 | 97.67 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVM+TLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BDK5 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.6e-202 | 96.51 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A5A7SYI1 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.6e-202 | 96.51 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PSEGENALATVGPRPMEWSTVPY+ PQGPGPNGKQRTSSLESPIMLL+GHQSAIYTLKFNP G+VIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWT DGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS DGSKVTAGSSDRMVY+W
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIV SCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A6J1DDM1 U5 small nuclear ribonucleoprotein 40 kDa protein | 2.1e-202 | 97.95 | Show/hide |
Query: PSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDL
PSEG NALATVGPRPMEWSTVPY APQGPGPNGKQRTSSLES IMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDL
Subjt: PSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDL
Query: HWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN
HWTTDG QIV+ASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN
Subjt: HWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDN
Query: DVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
DVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKI EGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
Subjt: DVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTT
Query: SRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
SRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: SRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A6J1G1Q0 U5 small nuclear ribonucleoprotein 40 kDa protein | 2.6e-205 | 97.97 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| A0A6J1HV60 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.0e-204 | 97.67 | Show/hide |
Query: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
MQ PS GENALATVGPRPMEWSTVPY+APQGPGPNGKQRTSSLESPIMLL GHQSAIYTLKFNPAG VIASGSHDKEIFLWNVHGDCKN+MVLRGHKNAV
Subjt: MQAPSEGENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAV
Query: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
LDLHWTTDGSQIVSASPDKTLRAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Subjt: LDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGG
Query: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Subjt: IDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVW
Query: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
DTTSRRIL+KLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
Subjt: DTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| SwissProt top hits | e value | %identity | Alignment |
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| Q2HJH6 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.4e-123 | 61.17 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + SAS DKT+ WD ETG++VK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
SYLL+N MD + +WD+RP+AP+ RCV+IF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q55AR8 U5 small nuclear ribonucleoprotein 40 kDa protein | 3.6e-111 | 56.77 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
G +RTS LE PIM L GH+ IY+ KFN G +ASG DKEIFLWNV+G+C N+ VL+GHK +L+LHW+TD ++I +A DK++ WD G+ +K++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
EHS VNSCCP RRGPPL+ SGSDD +A+++D R +G+ F KY +T+V FSDASD++ TGGIDN ++VWD+R E + TL HQD IT +S D
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGE-VMMTLQGHQDMITGMQLSPD
Query: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCS
G+YLL+N MD IWD+RPYAP NR +K F G Q+NFEKNL+K SWS DG ++ GSSDR VY+WDT ++++ + LPGH+G+VNE FHP+EPI+ SCS
Subjt: GSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCS
Query: SDKQIYLGEI
SDK IYLGEI
Subjt: SDKQIYLGEI
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| Q5RF51 U5 small nuclear ribonucleoprotein 40 kDa protein | 6.0e-122 | 60.84 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+G+ AV++LH+ TDGS + SAS DKT+ WD ETG++VK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR V VWDTTSRRIL+KLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein | 1.1e-123 | 60.84 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + SAS DKT+ WD ETG++VK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ A+QTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRR+L+KLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Q96DI7 U5 small nuclear ribonucleoprotein 40 kDa protein | 6.4e-124 | 61.49 | Show/hide |
Query: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
G R SSL++PIMLL+GH+ +Y KF+P G +AS D+ I LWNV+GDC N+ L+GH AV++LH+ TDGS + SAS DKT+ WD ETG++VK++
Subjt: GKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKM
Query: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
H+SFVNSC P RRGP L+ +GSDDGT KLWD+R++ AIQTF + YQ+ AV+F+D SD+I +GGIDND+KVWDLR+ ++ T++GH D +TG+ LS +G
Subjt: AEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDG
Query: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
SYLL+N MD + +WD+RP+AP+ RCVKIF+G+ HNFEKNLL+CSWSPDGSK+ AGS+DR VYVWDTTSRRIL+KLPGH GS+NE FHP EPI+ S SS
Subjt: SYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSS
Query: DKQIYLGEI
DK++Y+GEI
Subjt: DKQIYLGEI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G43770.1 Transducin/WD40 repeat-like superfamily protein | 2.6e-189 | 87.83 | Show/hide |
Query: ENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTT
EN A GPRPMEWSTVP+ A QGPGPNGK RTSSLE+PIMLL+GH SA+YT+KFNPAG +IASGSHD+EIFLW VHGDCKNFMVL+GHKNA+LDLHWT+
Subjt: ENALATVGPRPMEWSTVPYHAPQGPGPNGKQRTSSLESPIMLLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTT
Query: DGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV
DGSQIVSASPDKT+RAWDVETGKQ+KKMAEHSSFVNSCCPTRRGPPLI+SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDA+DKIFTGG+DNDVKV
Subjt: DGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKV
Query: WDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRI
WDLRKGE MTL+GHQD ITGM LSPDGSYLLTNGMD KLC+WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDG+KVTAGSSDRMV++WDTTSRR
Subjt: WDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRI
Query: LFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
++KLPGHTGSVNECVFHP+EPI+GSCSSDK IYLGEI
Subjt: LFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI
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| AT3G49660.1 Transducin/WD40 repeat-like superfamily protein | 1.3e-39 | 30.07 | Show/hide |
Query: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSC
LT H A+ ++KF+ G ++AS S DK I + ++ + GH+N + D+ +++D IVSAS DKTL+ WDVETG +K + H+++ C
Subjt: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVH----GDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSC
Query: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
+IVSGS D T ++WD+ ++ P +TAV F+ I + D ++WD G + TL ++ ++ SP+G ++L +
Subjt: CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTL-QGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
D L +W++ + +K + GH N + + +G ++ +GS D V++W+ S+++L KL GHT +V HP+E ++ S S DK +
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
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| AT5G08560.1 transducin family protein / WD-40 repeat family protein | 1.1e-25 | 24.58 | Show/hide |
Query: LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFM--VLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSC-
+L H ++ L+F+ G +AS S D+ +W + D + L GH V+ + W+ D Q+++ ++ +R WDV++G V + SC
Subjt: LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFM--VLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSC-
Query: -CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
P +G I++G D + +WD+ R + Q ++ ++ +D + + D+ + ++D R+ V ++ +DMIT LS D Y+L N +
Subjt: -CPTRRGPPLIVSGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSE-PIVGSCSSDKQI
+ ++ +W++ + V ++GH+ + + C + + +GS D VY+W ++ +++ +LPGH G+VN + P+ ++ S S D I
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSE-PIVGSCSSDKQI
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| AT5G52820.1 WD-40 repeat family protein / notchless protein, putative | 2.0e-27 | 28.24 | Show/hide |
Query: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGK-QVKKMAEHSSFVN--SCC
+ GH A+ + F+P G +ASGS D + LW+++ + F +GHKN VL + W+ DG +VS S + W+ + G+ + + H ++ S
Subjt: LTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGK-QVKKMAEHSSFVN--SCC
Query: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
P P V+ S DG A++WD+ ++ I +T V + I+TG D +K+W+ +G+++ L+GH I + LS + Y+L G
Subjt: PTRRGPPL--IVSGSDDGTAKLWDMR-QRGAIQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWD-TTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIY
+D R Y P K E ++N K SP+ ++ +GS D +++W+ + S++ +L GH VN F P + S S DK +
Subjt: DCKLCIWDM--RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWD-TTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQIY
Query: L
L
Subjt: L
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| AT5G64730.1 Transducin/WD40 repeat-like superfamily protein | 2.3e-28 | 26.69 | Show/hide |
Query: LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPT
+L GH+ A+ +FN G+ + D+ I LWN H + H V D+H T+D ++ S D+ + WDV TG+ ++K H VN+
Subjt: LLTGHQSAIYTLKFNPAGDVIASGSHDKEIFLWNVHGDCKNFMVLRGHKNAVLDLHWTTDGSQIVSASPDKTLRAWDVETGKQVKKMAEHSSFVNSCCPT
Query: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
++VS D + ++WD R I TF D T +S +I G +D V+ +D+R G M G + + +S DG+ +L +
Subjt: RRGPPLIVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDASDKIFTGGIDNDVKVWDLRKGEVMMTLQGHQDMITGMQLSPDGSYLLTNGM
Query: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
D L + D +++++GH K C + + V GS D +V+ WD ++L K H V +HP E + + S D I
Subjt: DCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYVWDTTSRRILFKLPGHTGSVNECVFHPSEPIVGSCSSDKQI
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