; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0039856 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039856
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionnuclear pore complex protein NUP54
Genome locationchr13:435823..439800
RNA-Seq ExpressionLag0039856
SyntenyLag0039856
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573649.1 Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia]2.2e-18391.56Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFAA
        FG   S+ AFGTPQSTPAFGTP+STPAFGTPSASPAFGN SSTPAFGTPSSSSFATGFGSSLFSTPFSSQP Q QQQQQQSPLFQ PAATGFGFQTPFAA
Subjt:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFAA

Query:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND
        PQSSPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQY+AKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGF D
Subjt:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLKIQDEVILSDAERL+MTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        RRV+NLLTIT GQ+NGS AGNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM D+ S
Subjt:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

XP_004135312.1 nuclear pore complex protein NUP54 [Cucumis sativus]1.6e-18691.52Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQP QQQQQ QQSP+F Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQS+PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+ KP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGF DLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        QLKGSGAELSRRVQNLLT+TRGQ+NGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM D+AS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

XP_008446043.1 PREDICTED: nuclear pore complex protein NUP54 [Cucumis melo]3.6e-18692.03Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT
        MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQP QQQQQ QQS LF Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+AKP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGF DLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        QLKGSGAELS+RVQNLLTITRGQ+NGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM D+AS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

XP_022151739.1 nuclear pore complex protein NUP54 [Momordica charantia]1.9e-19094.47Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFA
        MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS+S+F TGFGSSLFSTPFSSQP QQ QQQQQSPLFQQP ATGFGFQTPFA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFA

Query:  APQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFN
        APQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ++AKPAGVSDIMWAEAM KLEGMESADRERLWPQLVQGF 
Subjt:  APQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFN

Query:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
        DLSQRLKIQDEVILSDAERL+MTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Subjt:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL

Query:  SRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        SRRVQNLLT TRGQ+NGS +GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEMTD+AS
Subjt:  SRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

XP_038893426.1 nuclear pore complex protein NUP54 [Benincasa hispida]4.2e-19093.32Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQP Q QQQ QQSPLF QPAAT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+ KPAGVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGF DLSQRLKIQDEVILSD++RL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        QLKGSGAELSRRVQNLLTITRGQ+NGS AGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAED+EMTD+AS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPW8 Nup54 domain-containing protein7.9e-18791.52Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT
        MFGAQPSSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQP QQQQQ QQSP+F Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPF APQS+PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+ KP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGF DLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQR LLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
Subjt:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        QLKGSGAELSRRVQNLLT+TRGQ+NGS  GNSIY QGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM D+AS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

A0A1S3BE47 nuclear pore complex protein NUP541.8e-18692.03Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT
        MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQP QQQQQ QQS LF Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+AKP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGF DLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        QLKGSGAELS+RVQNLLTITRGQ+NGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM D+AS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

A0A5A7SSX4 Nuclear pore complex protein NUP541.8e-18692.03Show/hide
Query:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT
        MFGAQ SSS         AFGTPQSTPAFGTP+STPAFGTPSASPAFGNLSSTPAFGTPS+SSFATGFGSSLFSTPFSSQP QQQQQ QQS LF Q +AT
Subjt:  MFGAQPSSS---------AFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAAT

Query:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL
        GFGFQTPFAAPQS+PFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQY+AKP GVSDIMWAEAMAKLEGMESADRERL
Subjt:  GFGFQTPFAAPQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERL

Query:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR
        WPQLVQGF DLSQRLKIQDEVILSD+ERL+MTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKLALITR
Subjt:  WPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITR

Query:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        QLKGSGAELS+RVQNLLTITRGQ+NGS  GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM D+AS
Subjt:  QLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

A0A6J1DDY9 nuclear pore complex protein NUP549.1e-19194.47Show/hide
Query:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFA
        MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPS+S+F TGFGSSLFSTPFSSQP QQ QQQQQSPLFQQP ATGFGFQTPFA
Subjt:  MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFA

Query:  APQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFN
        APQS+PFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKD+AGNPKYAFKHLLFSVTDPQ++AKPAGVSDIMWAEAM KLEGMESADRERLWPQLVQGF 
Subjt:  APQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFN

Query:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
        DLSQRLKIQDEVILSDAERL+MTQSNVKMLQRHFLADTLPWVQRL+QKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL
Subjt:  DLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAEL

Query:  SRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        SRRVQNLLT TRGQ+NGS +GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEMTD+AS
Subjt:  SRRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

A0A6J1G105 nuclear pore complex protein NUP547.7e-18291.29Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFAA
        FG   S+ AFGTPQSTPAFGTP STPAFGTPSASPAFGN SSTPAFGTPSSSSFATGFGSSLFSTPFSSQP   QQQQQQSPLFQ PAATGFGFQTPFAA
Subjt:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFAA

Query:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND
        PQSSPFPNAQLTTQMAPVAPLPFS+ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQY+AKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGF D
Subjt:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLKIQDEVILSDAERL+MTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VEALESKGCRVP+M GEAELAE+LALITRQL+GSGAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS
        RRV+NLLTIT GQ+NGS AGNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM D+ S
Subjt:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS

SwissProt top hitse value%identityAlignment
P70582 Nuclear pore complex protein Nup542.9e-0826.34Show/hide
Query:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGV  I+W +A      +++ D E+L P  + GF +L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSN-GSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q++ G+V     Y      I    L ++++ L+QQ E ++ L +++K D+ 
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSN-GSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR

Query:  DMEII
        D++++
Subjt:  DMEII

Q7Z3B4 Nucleoporin p548.3e-0825.85Show/hide
Query:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGV  I+W +A      +++ D E+L P  + GF +L +RLK+QD++      RL +   ++  LQ++    ++  + + K+K   L  R L+V+   E
Subjt:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSN-GSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q++ G+V     Y      I    L ++++ L+QQ E ++ L +++K D+ 
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSN-GSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR

Query:  DMEII
        D++++
Subjt:  DMEII

Q8BTS4 Nuclear pore complex protein Nup542.9e-0826.34Show/hide
Query:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGV  I+W +A      +++ D E+L P  + GF +L +RLK+QD++      RL +   ++  LQ++    T+  + + K+K   L  R L+V+   E
Subjt:  PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFNDLSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSN-GSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR
             G    +   E +L  +L  I  +L  +  +   R+  L++  R Q++ G+V     Y      I    L ++++ L+QQ E ++ L +++K D+ 
Subjt:  ALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSN-GSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVR

Query:  DMEII
        D++++
Subjt:  DMEII

Q8GYF7 Nuclear pore complex protein NUP543.7e-14172.46Show/hide
Query:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPPQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA
        FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS+ SF++ GFGSSLFS+PFSSQ PQQQQQQQQ    S LFQQ  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPPQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA

Query:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND
         Q +PFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQY+ KPA VSDIMWAEAM+KLEGM+S +RERLWPQLVQGF D
Subjt:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM
        RRVQ+L TI+R Q+N   AG+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EM
Subjt:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM

Q9VDV3 Nuclear pore complex protein Nup586.0e-0637.01Show/hide
Query:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTP-FA
        FG   ++ AFG P +T AFG P++TPAFG  +A+PAFG  ++TPAFG P+++S    FG+   +T F +    Q              A  F F TP  +
Subjt:  FGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTP-FA

Query:  APQSSPFPNAQLTTQMAPVAPLPFSLA
        AP ++P      TT     A +P SL+
Subjt:  APQSSPFPNAQLTTQMAPVAPLPFSLA

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein2.6e-14272.46Show/hide
Query:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPPQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA
        FGTP S+P+FGTPSSTPAFGT  +SPAFG  S+TPAFGTPS+ SF++ GFGSSLFS+PFSSQ PQQQQQQQQ    S LFQQ  ++ FGFQ+PF      
Subjt:  FGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFAT-GFGSSLFSTPFSSQPPQQQQQQQQ----SPLFQQPAATGFGFQTPF----AA

Query:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND
         Q +PFPNAQLTTQMAPVAP+P+SLADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQY+ KPA VSDIMWAEAM+KLEGM+S +RERLWPQLVQGF D
Subjt:  PQSSPFPNAQLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFND

Query:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS
        LSQRLK+QDEV++SD +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL  ITRQ+KG GAELS
Subjt:  LSQRLKIQDEVILSDAERLQMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELS

Query:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM
        RRVQ+L TI+R Q+N   AG+S+YL GS KI EQSL DMQEVLQQ+TEAI RLGNVLKRD+RDMEI++AED EM
Subjt:  RRVQNLLTITRGQSNGSVAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCGCAACCGTCCTCCTCCGCCTTCGGCACTCCACAGTCAACTCCAGCCTTCGGTACGCCGTCGTCCACTCCTGCCTTCGGAACTCCATCGGCTTCTCCGGC
ATTTGGAAATCTTTCCTCAACTCCTGCCTTCGGAACTCCATCTTCGTCGTCTTTTGCCACCGGCTTCGGCTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAACCTCCAC
AACAGCAACAACAGCAGCAGCAATCGCCGTTGTTTCAGCAACCAGCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCTGCGCCTCAGTCCAGTCCATTTCCAAATGCT
CAATTGACCACTCAGATGGCGCCGGTGGCGCCGCTTCCTTTCTCTCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTA
TGCTTTCAAGCATTTGTTGTTCAGTGTTACTGATCCTCAATATAAGGCGAAGCCGGCTGGTGTATCGGATATAATGTGGGCTGAGGCTATGGCAAAGCTTGAAGGCATGG
AAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTCAACGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTG
CAGATGACCCAAAGCAACGTCAAAATGCTTCAGAGGCATTTTCTAGCTGATACTCTACCTTGGGTCCAAAGATTGAAACAGAAGGAGCAAGGTCTTCAAAGGCGTCTTTT
GAGAGTTATGAGAATTGTGGAGGCATTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCCGAGAAGTTAGCTTTGATAACGAGGCAGTTGA
AAGGATCTGGGGCAGAGCTTTCGAGGAGGGTGCAAAATTTGCTTACAATTACTCGTGGTCAATCAAATGGCTCCGTTGCTGGTAATTCCATCTATCTTCAAGGATCGGCA
AAAATACACGAACAGAGTCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGAAATGTTTTAAAACGAGATGTTAGAGACATGGAAAT
CATAATGGCCGAAGACAAGGAGATGACAGATAATGCGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGAGCGCAACCGTCCTCCTCCGCCTTCGGCACTCCACAGTCAACTCCAGCCTTCGGTACGCCGTCGTCCACTCCTGCCTTCGGAACTCCATCGGCTTCTCCGGC
ATTTGGAAATCTTTCCTCAACTCCTGCCTTCGGAACTCCATCTTCGTCGTCTTTTGCCACCGGCTTCGGCTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAACCTCCAC
AACAGCAACAACAGCAGCAGCAATCGCCGTTGTTTCAGCAACCAGCCGCTACAGGATTCGGTTTCCAGACTCCGTTTGCTGCGCCTCAGTCCAGTCCATTTCCAAATGCT
CAATTGACCACTCAGATGGCGCCGGTGGCGCCGCTTCCTTTCTCTCTGGCAGATCGAGATATTCAAGCAATTGTTGAGGCTTACAAGGACGACGCAGGAAACCCTAAGTA
TGCTTTCAAGCATTTGTTGTTCAGTGTTACTGATCCTCAATATAAGGCGAAGCCGGCTGGTGTATCGGATATAATGTGGGCTGAGGCTATGGCAAAGCTTGAAGGCATGG
AAAGTGCTGATAGAGAGCGATTGTGGCCGCAGCTTGTTCAAGGTTTCAACGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTTTCTGATGCTGAGAGACTG
CAGATGACCCAAAGCAACGTCAAAATGCTTCAGAGGCATTTTCTAGCTGATACTCTACCTTGGGTCCAAAGATTGAAACAGAAGGAGCAAGGTCTTCAAAGGCGTCTTTT
GAGAGTTATGAGAATTGTGGAGGCATTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGGGAGGCTGAATTGGCCGAGAAGTTAGCTTTGATAACGAGGCAGTTGA
AAGGATCTGGGGCAGAGCTTTCGAGGAGGGTGCAAAATTTGCTTACAATTACTCGTGGTCAATCAAATGGCTCCGTTGCTGGTAATTCCATCTATCTTCAAGGATCGGCA
AAAATACACGAACAGAGTCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACCGAGGCCATTGCTAGACTTGGAAATGTTTTAAAACGAGATGTTAGAGACATGGAAAT
CATAATGGCCGAAGACAAGGAGATGACAGATAATGCGAGTTAA
Protein sequenceShow/hide protein sequence
MFGAQPSSSAFGTPQSTPAFGTPSSTPAFGTPSASPAFGNLSSTPAFGTPSSSSFATGFGSSLFSTPFSSQPPQQQQQQQQSPLFQQPAATGFGFQTPFAAPQSSPFPNA
QLTTQMAPVAPLPFSLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYKAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFNDLSQRLKIQDEVILSDAERL
QMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLALITRQLKGSGAELSRRVQNLLTITRGQSNGSVAGNSIYLQGSA
KIHEQSLADMQEVLQQQTEAIARLGNVLKRDVRDMEIIMAEDKEMTDNAS