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Lag0039935 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0039935
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr13:1026321..1026737
RNA-Seq ExpressionLag0039935
SyntenyLag0039935
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601543.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6392.81Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG
        MGLSNFP SAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQM+SAS NPSSSEEE D ENGRERRISITQFKSL QSF NG TE GSASRCVMAECCVCLCG
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

XP_022151826.1 probable E3 ubiquitin-protein ligase XERICO [Momordica charantia]3.2e-6390Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSA--SANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLC
        MGLSNFP  AEGVLLLPVL+MNTVMSMAFLK+LVRSVIQM+SA  SA+PSSSEEEYDSEN RERRISITQFKSLRQSFNG TEDGSASRC+ AECCVCLC
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSA--SANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLC

Query:  GFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        GFEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSI+
Subjt:  GFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

XP_022957080.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]1.9e-6392.81Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG
        MGLSNFP SAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQM+SAS NPSSSEEE D ENGRERRISITQFKSL QSF NG TE GSASRCVMAECCVCLCG
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

XP_022984317.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]8.3e-6492.09Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG
        MGLSNFP SAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQM+SAS NPSSSEEE+D ENGRERRISITQFKSL QSF NG TE GSASRC+MAECCVCLCG
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

XP_023523084.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]1.9e-6392.09Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG
        MGLSNFP SAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQM+SAS NPSSSEEE+D ENGRERRISITQFKSL QSF NG TE GSASRC MAECCVCLCG
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

TrEMBL top hitse value%identityAlignment
A0A0A0KTI8 RING-type domain-containing protein4.2e-6188.41Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLCGF
        MGLSNFP SAEGVLLLPVLVMNTVMSMAFLKN VRSVIQM+SAS N SSSEEEYD EN RERRISITQFK+L QSFNGETE+   SRCVMAECCVCLC F
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLCGF

Query:  EADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        EADEEVSELSCKHFFHK CLSKWFDNKH TCPLCRSIE
Subjt:  EADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

A0A5A7SYA9 Putative E3 ubiquitin-protein ligase XERICO1.9e-6188.41Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLCGF
        MGLSNFP SAEGVLLLPVLVM+TVMSMAFLKN VRSVIQM+SAS N SSSEEEYD ENGRERRISITQFK+L QSFNGETE+   SRCVMAECCVCLC F
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLCGF

Query:  EADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        EADEEVSELSCKHFFHK CLSKWFDNKH TCPLCRSIE
Subjt:  EADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

A0A6J1DFU2 probable E3 ubiquitin-protein ligase XERICO1.5e-6390Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSA--SANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLC
        MGLSNFP  AEGVLLLPVL+MNTVMSMAFLK+LVRSVIQM+SA  SA+PSSSEEEYDSEN RERRISITQFKSLRQSFNG TEDGSASRC+ AECCVCLC
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSA--SANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLC

Query:  GFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        GFEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSI+
Subjt:  GFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

A0A6J1GZI7 probable E3 ubiquitin-protein ligase XERICO9.0e-6492.81Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG
        MGLSNFP SAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQM+SAS NPSSSEEE D ENGRERRISITQFKSL QSF NG TE GSASRCVMAECCVCLCG
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

A0A6J1J1V9 probable E3 ubiquitin-protein ligase XERICO4.0e-6492.09Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG
        MGLSNFP SAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQM+SAS NPSSSEEE+D ENGRERRISITQFKSL QSF NG TE GSASRC+MAECCVCLCG
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSF-NGETEDGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHK CLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRSIE

SwissProt top hitse value%identityAlignment
Q7ZW78 E3 ubiquitin-protein ligase RNF1813.3e-0754.55Show/hide
Query:  ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCR
        +C VCL  FE  E V E+ CKH FH GC+  W  NK  +CPLCR
Subjt:  ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCR

Q8LDB8 E3 ubiquitin-protein ligase At1g631701.1e-0751.11Show/hide
Query:  AECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCR
        AECC+CL  +E + E+ EL C H FH GC+ KW    + TCPLC+
Subjt:  AECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCR

Q93Z92 E3 ubiquitin-protein ligase At4g116803.3e-0751.06Show/hide
Query:  AECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHIT--CPLCR
        AECC+CLC +E   E+ EL C H FH  C+ KW    HI   CPLC+
Subjt:  AECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHIT--CPLCR

Q9SI09 Probable E3 ubiquitin-protein ligase XERICO3.2e-1839.19Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEE---YDSENGRERR---ISITQFKSLRQSFNGETED---GSASRCVMA
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + +V  S +PSSS        SEN          + Q +S  + F   T      S  RC   
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEE---YDSENGRERR---ISITQFKSLRQSFNGETED---GSASRCVMA

Query:  ---ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS
           EC VCL  F+ D E+++L C H FHK CL KW D  +ITCPLCR+
Subjt:  ---ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS

Q9ZU51 E3 ubiquitin-protein ligase RHA2B3.0e-0840.91Show/hide
Query:  SLRQSFNGETEDGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS
        +L + F+    D +AS     +C VCL   +  EEV +L C+H FHK CL  W  + +  CPLCRS
Subjt:  SLRQSFNGETEDGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein4.2e-2954.24Show/hide
Query:  MNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLCGFEADEEVSEL-SCKHFFHKGC
        MNTV+S+  LKN+VRSV Q+V++    S   ++   ++   RRISITQFKSL ++   E E+         ECCVCLCGF+ +EEVSEL SCKHFFH+ C
Subjt:  MNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLCGFEADEEVSEL-SCKHFFHKGC

Query:  LSKWFDNKHITCPLCRSI
        L  WF N H TCPLCRSI
Subjt:  LSKWFDNKHITCPLCRSI

AT1G67856.1 RING/U-box superfamily protein4.3e-3453.57Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPS-SSEEEYDSENG-RERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLC
        MG+S++P ++EGV  +P+LVMNTV+S++ +KN+VRSV+ MVS+  N + + E++ D E+  R RRISIT F+SL ++       GS +     +CCVCLC
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPS-SSEEEYDSENG-RERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLC

Query:  GFEADEEVSEL-SCKHFFHKGCLSKWFDNKHITCPLCRSI
        GF+ +EEVSEL SCKH+FH  CL KWF N H TCPLCRSI
Subjt:  GFEADEEVSEL-SCKHFFHKGCLSKWFDNKHITCPLCRSI

AT2G01150.1 RING-H2 finger protein 2B2.1e-0940.91Show/hide
Query:  SLRQSFNGETEDGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS
        +L + F+    D +AS     +C VCL   +  EEV +L C+H FHK CL  W  + +  CPLCRS
Subjt:  SLRQSFNGETEDGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS

AT2G04240.1 RING/U-box superfamily protein2.3e-1939.19Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEE---YDSENGRERR---ISITQFKSLRQSFNGETED---GSASRCVMA
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + +V  S +PSSS        SEN          + Q +S  + F   T      S  RC   
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEE---YDSENGRERR---ISITQFKSLRQSFNGETED---GSASRCVMA

Query:  ---ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS
           EC VCL  F+ D E+++L C H FHK CL KW D  +ITCPLCR+
Subjt:  ---ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS

AT2G04240.2 RING/U-box superfamily protein2.3e-1939.19Show/hide
Query:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEE---YDSENGRERR---ISITQFKSLRQSFNGETED---GSASRCVMA
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + +V  S +PSSS        SEN          + Q +S  + F   T      S  RC   
Subjt:  MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEE---YDSENGRERR---ISITQFKSLRQSFNGETED---GSASRCVMA

Query:  ---ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS
           EC VCL  F+ D E+++L C H FHK CL KW D  +ITCPLCR+
Subjt:  ---ECCVCLCGFEADEEVSELSCKHFFHKGCLSKWFDNKHITCPLCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCTCAAATTTTCCCCATTCGGCTGAAGGAGTGTTGCTGTTGCCAGTGCTAGTGATGAACACAGTAATGTCGATGGCTTTCTTGAAGAATTTGGTGAGATCTGT
GATACAAATGGTGAGTGCTAGTGCGAACCCTTCGAGTTCTGAGGAAGAATATGATTCAGAAAATGGAAGAGAAAGAAGAATCTCAATTACCCAGTTCAAATCCTTGCGCC
AAAGCTTCAATGGTGAAACAGAGGATGGCTCTGCTTCGAGGTGTGTTATGGCAGAGTGCTGCGTTTGTCTTTGTGGGTTTGAAGCTGATGAGGAAGTTAGTGAGTTATCT
TGCAAGCACTTTTTCCATAAAGGTTGTCTTTCTAAGTGGTTTGATAATAAGCACATTACTTGCCCTCTCTGTCGCTCCATTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCTCAAATTTTCCCCATTCGGCTGAAGGAGTGTTGCTGTTGCCAGTGCTAGTGATGAACACAGTAATGTCGATGGCTTTCTTGAAGAATTTGGTGAGATCTGT
GATACAAATGGTGAGTGCTAGTGCGAACCCTTCGAGTTCTGAGGAAGAATATGATTCAGAAAATGGAAGAGAAAGAAGAATCTCAATTACCCAGTTCAAATCCTTGCGCC
AAAGCTTCAATGGTGAAACAGAGGATGGCTCTGCTTCGAGGTGTGTTATGGCAGAGTGCTGCGTTTGTCTTTGTGGGTTTGAAGCTGATGAGGAAGTTAGTGAGTTATCT
TGCAAGCACTTTTTCCATAAAGGTTGTCTTTCTAAGTGGTTTGATAATAAGCACATTACTTGCCCTCTCTGTCGCTCCATTGAATAG
Protein sequenceShow/hide protein sequence
MGLSNFPHSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMVSASANPSSSEEEYDSENGRERRISITQFKSLRQSFNGETEDGSASRCVMAECCVCLCGFEADEEVSELS
CKHFFHKGCLSKWFDNKHITCPLCRSIE