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Lag0040077 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040077
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:2014108..2015492
RNA-Seq ExpressionLag0040077
SyntenyLag0040077
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8597368.1 hypothetical protein GDO81_002266 [Engystomops pustulosus]2.3e-0433.86Show/hide
Query:  GKFEG-SLGRLWDFPGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKKLGEAWEVPE
        G F G S+ R   FPGP   R  H        G S+ R R+FPGP   R GH        G S+ R R+F GP   R GH       LG  +      P 
Subjt:  GKFEG-SLGRLWDFPGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKKLGEAWEVPE

Query:  PLFKHRRHPRGAYTLLGKSLGRPGKFP
        P      H        G S+ R G FP
Subjt:  PLFKHRRHPRGAYTLLGKSLGRPGKFP

XP_015472393.2 basic proline-rich protein-like, partial [Parus major]3.5e-0535.95Show/hide
Query:  PGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYT
        PGPL K    P       G   G P   PGPL K  G P      LGK+LG PR  PGPL K  G P     LLG   G     P PL      P G  T
Subjt:  PGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYT

Query:  -LLGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG
          LG + G  G  P L        G      GK+ G PG+ P    ++   PG
Subjt:  -LLGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG

XP_021913216.1 collagen alpha-1(I) chain-like [Zootermopsis nevadensis]2.1e-1035.85Show/hide
Query:  RGAYTLLGKSLGRPRNFP-GPLFKRCGHPRGAYTLLGKSLGRPRNFP-GPLFKRCGHPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYTLLGKSLGRP
        +G Y   G S GRP  FP GP     G P+G Y   G S GRP  FP GP     G P G Y   G   G     P         P+G Y   G S G P
Subjt:  RGAYTLLGKSLGRPRNFP-GPLFKRCGHPRGAYTLLGKSLGRPRNFP-GPLFKRCGHPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYTLLGKSLGRP

Query:  GKFPSLSSSIVVIPGVRTLF--WGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPRNFPGSLFKRRGHPRGAYTLLGKKLGEAWEFPKPLFKLHSHP
        G FPS  S      G++  +   G S GRPG FPS  S     P       G S GRP  FP       G P G Y   G   G    FP         P
Subjt:  GKFPSLSSSIVVIPGVRTLF--WGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPRNFPGSLFKRRGHPRGAYTLLGKKLGEAWEFPKPLFKLHSHP

Query:  RGAYTLLGKSLG
        +G Y   G S G
Subjt:  RGAYTLLGKSLG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGTGACTACCGAACTCAGTCGAGTCCCATTCCTTGTCTAATGGTCGGCCTTAGTCTTGACATGAGGACGAGCACTTTCCCTGCATGGCTTGGGAAGTTTGAGGG
AAGCTTGGGGAGGCTTTGGGATTTCCCAGGGCCTCTCTTCAAGCGTCGTGATCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCC
CAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGT
CATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCT
GGGGAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGA
AGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGTCTCTCTTCAAGCGT
CGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGTACAC
TCTTCTGGGGAAAAGCTTGGGAGGCCTGGAATTTCCCAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGTGCGTACACTCTTCTAGGGAAAAATTAAGGAAAGACTTAC
TTCGTGACCGAGCTCTTGAAGAGCATCTCCCTTTCGGCTTGAACCGTTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTGCACTCCTCTGGGGA
AAAGCTTTGGGAGGCCTGGGAATCTCCCGAGTCTCTCTGCAAGCGCTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGTGACTACCGAACTCAGTCGAGTCCCATTCCTTGTCTAATGGTCGGCCTTAGTCTTGACATGAGGACGAGCACTTTCCCTGCATGGCTTGGGAAGTTTGAGGG
AAGCTTGGGGAGGCTTTGGGATTTCCCAGGGCCTCTCTTCAAGCGTCGTGATCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCC
CAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGT
CATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCT
GGGGAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGA
AGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGTCTCTCTTCAAGCGT
CGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGTACAC
TCTTCTGGGGAAAAGCTTGGGAGGCCTGGAATTTCCCAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGGTGCGTACACTCTTCTAGGGAAAAATTAAGGAAAGACTTAC
TTCGTGACCGAGCTCTTGAAGAGCATCTCCCTTTCGGCTTGAACCGTTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTGCACTCCTCTGGGGA
AAAGCTTTGGGAGGCCTGGGAATCTCCCGAGTCTCTCTGCAAGCGCTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
Protein sequenceShow/hide protein sequence
MRSDYRTQSSPIPCLMVGLSLDMRTSTFPAWLGKFEGSLGRLWDFPGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCG
HPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYTLLGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPRNFPGSLFKR
RGHPRGAYTLLGKKLGEAWEFPKPLFKLHSHPRGAYTLLGKSLGGLEFPSLSSSCIVIPGCVHSSREKLRKDLLRDRALEEHLPFGLNRFGYDNRSSVVVFPGVRALLWG
KALGGLGISRVSLQALSKLLKRNSE