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Lag0040134 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040134
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-binding protein
Genome locationchr13:2410821..2413054
RNA-Seq ExpressionLag0040134
SyntenyLag0040134
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601448.1 Galactoside 2-alpha-L-fucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]5.9e-9795.29Show/hide
Query:  KGGAMSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQG
        KGGAMSF KGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYVKKFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQG
Subjt:  KGGAMSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQG

Query:  VSEEEAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        VSEEEAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
Subjt:  VSEEEAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-9494.65Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYV+KFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

XP_022151151.1 uncharacterized protein LOC111019147 [Momordica charantia]1.8e-9394.65Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLL RTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGT+KTI+LPEDVYVKKFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VANMEYRAEKKVKKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG G
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]1.6e-9495.19Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYVKKFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]1.4e-9394.65Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG VKTI LPEDVYVKKFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

TrEMBL top hitse value%identityAlignment
A0A0A0KQQ3 Uncharacterized protein3.3e-8588.3Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLLT+TRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDGT+KTI LPEDVYVKKFF++HPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGR
        EAMTVANMEYRAEKK+KK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  G GR
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGR

A0A6J1DDQ7 uncharacterized protein LOC1110191478.6e-9494.65Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLL RTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGT+KTI+LPEDVYVKKFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VANMEYRAEKKVKKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG G
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

A0A6J1GZF0 uncharacterized protein LOC1114589147.7e-9595.19Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLLTRTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGT+KTI LPEDVYVKKFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

A0A6J1KC52 uncharacterized protein LOC1114918816.6e-9494.65Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLL+RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG VKTI LPEDVYVKKFFQ+HPDSKY+DAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VANMEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

A0A7N2LBH9 Uncharacterized protein2.1e-8485.03Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF KGDLLTRTRKLVKGLAK++P+WLKAME APP TFPR DG VK I+LPEDVY+KKFFQ+HPDSK++DAIK CSFDPPPAR+FGLRVL+LKEQGVSEE
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG
        EAM VA+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERK+VRDRFFNPKI EI Q+LKEE+AAE QDR RG G
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26750.1 unknown protein1.8e-5153.76Show/hide
Query:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MS+ KGDLL++TR+LV GLA  EPVWLKAME +PPP FPR +G ++ I LPED YV+KF  +HP +K  D  K  +F P  AR++G RVLELKE G+SE 
Subjt:  MSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYVKKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS
        +AM+VANMEY +E+K  KKAY RLK++A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E+   +QDR  GS
Subjt:  EAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCAGGCAACTCGGTTTCCAGCGGTTCCAATAAACCTTCTTCCTGTTACCAATTCCCAATTCTCGAAGTGTAGATTTGCTGAGCTATCTAGTTTCATCGTTTACGT
TCTCTTTCGTCATATATCCTTGAATCGTATCGAAGTCCAAAAAGGAGGAGCCATGTCCTTCACGAAAGGGGATTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGG
CCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAACAGGCGCCACCTCCTACATTTCCTCGAGTGGATGGAACAGTGAAGACAATCAATCTTCCCGAGGATGTATATGTG
AAAAAATTCTTTCAGAGACATCCAGATTCAAAATACCAAGATGCCATCAAGTTTTGTAGTTTCGATCCTCCTCCAGCCCGAATATTTGGCTTGCGAGTGCTTGAACTGAA
GGAACAGGGTGTCAGTGAGGAGGAAGCCATGACAGTAGCCAATATGGAATACCGGGCAGAGAAAAAGGTGAAGAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTC
TTCAAGGGAAGAAACCTCCTCCAAACCCATATCCAAGTGCGATTAAGGAGATACAAGCTGAGGAAAGGAAATTTGTTCGAGATCGTTTCTTCAACCCCAAGATTAAAGAG
ATTGCACAGAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGAATGCGAGGCAGTGGTCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCAGGCAACTCGGTTTCCAGCGGTTCCAATAAACCTTCTTCCTGTTACCAATTCCCAATTCTCGAAGTGTAGATTTGCTGAGCTATCTAGTTTCATCGTTTACGT
TCTCTTTCGTCATATATCCTTGAATCGTATCGAAGTCCAAAAAGGAGGAGCCATGTCCTTCACGAAAGGGGATTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGG
CCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAACAGGCGCCACCTCCTACATTTCCTCGAGTGGATGGAACAGTGAAGACAATCAATCTTCCCGAGGATGTATATGTG
AAAAAATTCTTTCAGAGACATCCAGATTCAAAATACCAAGATGCCATCAAGTTTTGTAGTTTCGATCCTCCTCCAGCCCGAATATTTGGCTTGCGAGTGCTTGAACTGAA
GGAACAGGGTGTCAGTGAGGAGGAAGCCATGACAGTAGCCAATATGGAATACCGGGCAGAGAAAAAGGTGAAGAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTC
TTCAAGGGAAGAAACCTCCTCCAAACCCATATCCAAGTGCGATTAAGGAGATACAAGCTGAGGAAAGGAAATTTGTTCGAGATCGTTTCTTCAACCCCAAGATTAAAGAG
ATTGCACAGAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGAATGCGAGGCAGTGGTCGGTGA
Protein sequenceShow/hide protein sequence
MVQATRFPAVPINLLPVTNSQFSKCRFAELSSFIVYVLFRHISLNRIEVQKGGAMSFTKGDLLTRTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTVKTINLPEDVYV
KKFFQRHPDSKYQDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMTVANMEYRAEKKVKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKE
IAQRLKEERAAEMQDRMRGSGR