CuGenDBv2

Gene ID	Lag0040135
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	50S ribosomal protein L32, chloroplastic
Genome location	chr13:2414445..2418624
RNA-Seq Expression	Lag0040135
Synteny	Lag0040135
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574067.1 hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-45

89.62

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAM  VLP SSP+SGIMDRKDS PPLVLPEFNHESDRD I NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

XP_022151273.1 uncharacterized protein LOC111019232 [Momordica charantia]

3.6e-46

93.4

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRIMRA+EGQT SMLGLKAMANVLP  SPLSGIMDRKDSTPPLVLPEFNHESD DRI NCS VGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

XP_022945635.1 uncharacterized protein LOC111449817 [Cucurbita moschata]

8.8e-45

88.68

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMANVLP SSP++GI+ RKDS PPLVLPEFNHESDRD I NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

XP_022968104.1 uncharacterized protein LOC111467436 [Cucurbita maxima]

8.0e-46

90.57

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMA VLP SSP+SGIMD KDS PPLVLPEFNHESDRD I NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

XP_023541204.1 uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo]

2.7e-46

90.57

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAM  VLP SSP+SGIMDRKDS PPLVLPEFNHESDRDRI NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQP7 50S ribosomal protein L32, chloroplastic

9.2e-40

83.02

Show/hide

Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRIMRALEGQ GSMLGLKAMA  LP SSP+SG+M  KDS PPLVLPEFN E D D+  NCSIVGFGFPSLSFSGSMELMAVPK+KVSPHKR IRN PK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

A0A5A7SYB6 50S ribosomal protein L32, chloroplastic

1.3e-38

83.96

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRIMRALEGQTGSMLGLKAMA  LP SS   G+M  KDS PPLVLPEFN ESD DRI NCSIVGFGFPSL FSGSMELMAVPK+KVSPHKR IRN PK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

A0A6J1DBR3 50S ribosomal protein L32, chloroplastic

1.7e-46

93.4

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRIMRA+EGQT SMLGLKAMANVLP  SPLSGIMDRKDSTPPLVLPEFNHESD DRI NCS VGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

A0A6J1G1I2 50S ribosomal protein L32, chloroplastic

4.3e-45

88.68

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMANVLP SSP++GI+ RKDS PPLVLPEFNHESDRD I NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

A0A6J1HYN6 50S ribosomal protein L32, chloroplastic

3.9e-46

90.57

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Query:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMA VLP SSP+SGIMD KDS PPLVLPEFNHESDRD I NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPK

Query:  ALKPIP
        ALKPIP
Subjt:  ALKPIP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26740.1 Ribosomal L32p protein family

8.6e-22

51.85

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Query:  MALRI--MRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNG
        MALR+  ++    ++  +L  +++++V    SPL+G  DR  S PPLVLPEF+ ++    I+  S  GFG PS +F+GSMELMAVPK+K+S HKRGIRNG
Subjt:  MALRI--MRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNG

Query:  PKALKPIP
        PKALKP+P
Subjt:  PKALKPIP

AT1G69485.1 Ribosomal L32p protein family

9.2e-08

82.76

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Query:  MELMAVPKRKVSPHKRGIRNGPKALKPIP
        MELMAVPK+K+S HKRGIRNGPKA KP P
Subjt:  MELMAVPKRKVSPHKRGIRNGPKALKPIP

Sequences

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CDS sequence

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ATGGCGTTGAGGATTATGAGGGCGCTCGAGGGTCAGACGGGTTCGATGCTAGGGCTTAAAGCGATGGCTAATGTTTTACCTCAATCCTCGCCGTTATCTGGGATCATGGA
CCGTAAGGATTCCACGCCGCCGCTTGTTCTCCCGGAGTTTAACCATGAGTCTGACAGGGACAGGATCAAAAACTGCAGTATTGTGGGATTTGGTTTCCCTAGTTTATCTT
TTTCCGGGTCCATGGAGCTCATGGCTGTTCCTAAGAGGAAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGCCCAAAGGCTCTGAAACCTATCCCATACGATCAGTCG
AGTTCTTGGAAACTTTTGACCTATAGTTCAGGAGTTGTGGTAAAGTCAAGCTGCCTCACTTCTATTGTTGCAGTGGAAGGACAGGGGAGCAGGACAACTCAACCAGATGA
GCCAATGCAGGGTTCTTTAAATTTGGCATCTTTTCCCCTTTCAGAAAGGACGCTCATTGTATGGCAGATTACCTCAAACGACGACGCGTGTGAATGCCATGGTGACGACG
CATCTTCTCCACCGCCGTCACTCAAGCATGAGCTGCCGCATGCCCGACAGATCGACCAATTTCTGGAAGTGGCTCTCGGCCAATGGGCTCCAACTGCGTTTGTCAGGGAT
CGGATAATGTCGTCTACCCGATTGGTGAACCCTATCGGCAATTGCGTTCTTCTAGGACCCTGA

mRNA sequence

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Protein sequence

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MALRIMRALEGQTGSMLGLKAMANVLPQSSPLSGIMDRKDSTPPLVLPEFNHESDRDRIKNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPYDQS
SSWKLLTYSSGVVVKSSCLTSIVAVEGQGSRTTQPDEPMQGSLNLASFPLSERTLIVWQITSNDDACECHGDDASSPPPSLKHELPHARQIDQFLEVALGQWAPTAFVRD
RIMSSTRLVNPIGNCVLLGP

Lag0040135 (gene) of Sponge gourd (AG-4) v1 genome