; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040186 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040186
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein
Genome locationchr13:2776834..2777196
RNA-Seq ExpressionLag0040186
SyntenyLag0040186
Gene Ontology termsNA
InterPro domainsIPR044809 - F-box protein AUF1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585288.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2468.42Show/hide
Query:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
        + F+  VVKSFFDLISPI+VQSES NS AQILRQF  I RLEI+FPTG+ KV+++GGVKWRAEFGI   SCVIL+FRGIR +  D  A+A+ FDF
Subjt:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
XP_022951596.1 F-box protein At1g22220-like [Cucurbita moschata]1.1e-2468.42Show/hide
Query:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
        + F+  VVKSFFDLISPI+VQSES NS AQILRQF  I RLEI+FPTG+ KV+++GGVKWRAEFGI   SCVIL+FRGIR +  D  A+A+ FDF
Subjt:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
XP_023002829.1 F-box protein At1g78100-like [Cucurbita maxima]1.1e-2468.42Show/hide
Query:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
        + F+  VVKSFFDLISPI+VQSES NS AQILRQF  I RLEI+FPTG+ KV+++GGVKWRAEFGI   SCVIL+FRGIR +  D  A+A+ FDF
Subjt:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
XP_023537288.1 F-box protein At1g22220-like [Cucurbita pepo subsp. pepo]1.1e-2468.42Show/hide
Query:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
        + F+  VVKSFFDLISPI+VQSES NS AQILRQF  I RLEI+FPTG+ KV+++GGVKWRAEFGI   SCVIL+FRGIR +  D  A+A+ FDF
Subjt:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
XP_038886087.1 F-box protein At1g22220 [Benincasa hispida]9.3e-1960.82Show/hide
Query:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAMAEDFDFTRGMQ
        F+  VVKSFF LIS ++VQSES NS AQILRQF  I RL+I+FPTG+ KV++V  VKW+AEFG    SCVILIFRGIR  +  A    DFDF  G++
Subjt:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAMAEDFDFTRGMQ
TrEMBL top hitse value%identityAlignment
A0A0A0LN04 F-box domain-containing protein1.8e-1555.45Show/hide
Query:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIR----DLDDRAAMAEDFDFTRGM
        F+  V+KSF DL+SPI++QSES NS AQILRQF  I  L+I+FPT + KV++V  VKWRAEFG    SCVILIFR IR    + DD   +  D DF  G+
Subjt:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIR----DLDDRAAMAEDFDFTRGM

Query:  Q
        +
Subjt:  Q
A0A1S3BC00 F-box protein At1g222206.1e-1655.88Show/hide
Query:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAMAED-----FDFTRG
        F+  VVKSF DL+SPI+VQSE+ NS AQILRQF  I  L+I+FPT + KV++V  VKWRAEFG    SCVILIFR IR    + A+ ED      DF  G
Subjt:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAMAED-----FDFTRG

Query:  MQ
        ++
Subjt:  MQ
A0A5A7VGI7 F-box protein6.1e-1655.88Show/hide
Query:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAMAED-----FDFTRG
        F+  VVKSF DL+SPI+VQSE+ NS AQILRQF  I  L+I+FPT + KV++V  VKWRAEFG    SCVILIFR IR    + A+ ED      DF  G
Subjt:  FYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAMAED-----FDFTRG

Query:  MQ
        ++
Subjt:  MQ
A0A6J1GI01 F-box protein At1g22220-like5.5e-2568.42Show/hide
Query:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
        + F+  VVKSFFDLISPI+VQSES NS AQILRQF  I RLEI+FPTG+ KV+++GGVKWRAEFGI   SCVIL+FRGIR +  D  A+A+ FDF
Subjt:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
A0A6J1KRK0 F-box protein At1g78100-like5.5e-2568.42Show/hide
Query:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
        + F+  VVKSFFDLISPI+VQSES NS AQILRQF  I RLEI+FPTG+ KV+++GGVKWRAEFGI   SCVIL+FRGIR +  D  A+A+ FDF
Subjt:  FDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGI---SCVILIFRGIR-DLDDRAAMAEDFDF
SwissProt top hitse value%identityAlignment
Q9C9S2 F-box protein AUF13.6e-0537.35Show/hide
Query:  FYHFVVKSFFDLISPII--------VQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFR
        F+  + KS   L+ PI         + + S  + AQIL  F  I  LE++   G+ K++K   VKW+AEFG    SCVI+ FR
Subjt:  FYHFVVKSFFDLISPII--------VQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFR
Q9LM18 F-box protein AUF23.2e-0634.12Show/hide
Query:  PIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAM--AEDFDFTRGMQ
        PI + + S +   +IL +F  I  L+++ P G+ K++K   VKW+AEFG    SCVI+ FR    +    A+    D +F  G++
Subjt:  PIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAM--AEDFDFTRGMQ
Arabidopsis top hitse value%identityAlignment
AT1G22220.1 F-box family protein2.3e-0734.12Show/hide
Query:  PIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAM--AEDFDFTRGMQ
        PI + + S +   +IL +F  I  L+++ P G+ K++K   VKW+AEFG    SCVI+ FR    +    A+    D +F  G++
Subjt:  PIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFRGIRDLDDRAAM--AEDFDFTRGMQ
AT1G78100.1 F-box family protein2.5e-0637.35Show/hide
Query:  FYHFVVKSFFDLISPII--------VQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFR
        F+  + KS   L+ PI         + + S  + AQIL  F  I  LE++   G+ K++K   VKW+AEFG    SCVI+ FR
Subjt:  FYHFVVKSFFDLISPII--------VQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFG---ISCVILIFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCATCTCCATTTCTATCAGCGTTTCATTTCCCTCACGATTTCAACTTCAATTTCAACCTTCATTTTGATTTCTATCATTTTGTCGTCAAGTCGTTCTTCGATTT
GATTTCCCCTATTATTGTACAATCCGAGTCGCATAACTCTCTGGCTCAAATCCTCCGCCAGTTCGCCCCGATCCACCGCCTCGAGATCAAGTTTCCAACGGGCAATCCCA
AGGTCGACAAAGTCGGGGGCGTTAAATGGAGAGCGGAGTTTGGGATTAGCTGCGTGATATTGATTTTTCGAGGGATTAGGGATTTGGATGATCGAGCAGCGATGGCGGAG
GATTTCGATTTCACAAGAGGGATGCAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCATCTCCATTTCTATCAGCGTTTCATTTCCCTCACGATTTCAACTTCAATTTCAACCTTCATTTTGATTTCTATCATTTTGTCGTCAAGTCGTTCTTCGATTT
GATTTCCCCTATTATTGTACAATCCGAGTCGCATAACTCTCTGGCTCAAATCCTCCGCCAGTTCGCCCCGATCCACCGCCTCGAGATCAAGTTTCCAACGGGCAATCCCA
AGGTCGACAAAGTCGGGGGCGTTAAATGGAGAGCGGAGTTTGGGATTAGCTGCGTGATATTGATTTTTCGAGGGATTAGGGATTTGGATGATCGAGCAGCGATGGCGGAG
GATTTCGATTTCACAAGAGGGATGCAATTTTGA
Protein sequenceShow/hide protein sequence
MVSSPFLSAFHFPHDFNFNFNLHFDFYHFVVKSFFDLISPIIVQSESHNSLAQILRQFAPIHRLEIKFPTGNPKVDKVGGVKWRAEFGISCVILIFRGIRDLDDRAAMAE
DFDFTRGMQF