; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040383 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040383
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRing finger protein, putative
Genome locationchr13:4351457..4351945
RNA-Seq ExpressionLag0040383
SyntenyLag0040383
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3021750.1 RING-H2 finger ATL70-like [Olea europaea subsp. europaea]1.3e-1836.42Show/hide
Query:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAI
        +E+   F + I +S+GI  L+  +   +Y+C R   +           + PASD +       S +D+G  +TT++ +P+M YS+AK    D     C+I
Subjt:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAI

Query:  CLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSP
        CL D++  +   LR LP CGH+FH+ C+D WLR   TCP+CRN  +PTP P
Subjt:  CLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSP

CAN70851.1 hypothetical protein VITISV_030130 [Vitis vinifera]2.1e-1840.71Show/hide
Query:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE
        I +S+GI  L+  +   +Y C R  QV AA  GG G R   P  +E          VD+G  + T+  +P+M YS+AK    D     C+ICL D++  +
Subjt:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE

Query:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
           LRLLP CGH+FH+ C+D WLR   TCP+CR   +PTP
Subjt:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

RVW24613.1 RING-H2 finger protein ATL70 [Vitis vinifera]1.3e-1840.71Show/hide
Query:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE
        I +S+GI  L+  +   +Y C R  QV AA  GG G R   P  +E          VD+G  + T+  +P+M YS+AK    D     C+ICL D++  +
Subjt:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE

Query:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
           LRLLP CGH+FH+ C+D WLR   TCP+CR   +PTP
Subjt:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

XP_022854858.1 RING-H2 finger protein ATL70-like [Olea europaea var. sylvestris]1.3e-1836.42Show/hide
Query:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAI
        +E+   F + I +S+GI  L+  +   +Y+C R   +           + PASD +       S +D+G  +TT++ +P+M YS+AK    D     C+I
Subjt:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAI

Query:  CLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSP
        CL D++  +   LR LP CGH+FH+ C+D WLR   TCP+CRN  +PTP P
Subjt:  CLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSP

XP_034694481.1 RING-H2 finger protein ATL70 [Vitis riparia]1.6e-1840.43Show/hide
Query:  IQISIGIFFLV--LIALAYHCRRRIQV--AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRER
        I +S+GI  L+  +   +Y C R  QV  AA  GG G R   P  +E          VD+G  + T+  +P+M YS+AK    D     C+ICL D+++ 
Subjt:  IQISIGIFFLV--LIALAYHCRRRIQV--AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRER

Query:  ESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
        +   LRLLP CGH+FH+ C+D WLR   TCP+CR   +PTP
Subjt:  ESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

TrEMBL top hitse value%identityAlignment
A0A2C9V811 RING-type domain-containing protein1.3e-1838.56Show/hide
Query:  GFTEDSDI--FLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQA---KSDGDGG
        GF   S+I  F + I +SIGI  L+  +   +Y C R  Q ++      DR       E  S    +  VD+G  + T+  +P++ YS+A   K D  G 
Subjt:  GFTEDSDI--FLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQA---KSDGDGG

Query:  GCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
         C+ICL D++  +   LRLLP CGH+FH+ C+D WLR+  TCP+CR   LPTP
Subjt:  GCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

A0A438CN32 RING-H2 finger protein ATL706.1e-1940.71Show/hide
Query:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE
        I +S+GI  L+  +   +Y C R  QV AA  GG G R   P  +E          VD+G  + T+  +P+M YS+AK    D     C+ICL D++  +
Subjt:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE

Query:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
           LRLLP CGH+FH+ C+D WLR   TCP+CR   +PTP
Subjt:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

A0A438GK90 RING-H2 finger protein ATL703.0e-1838.65Show/hide
Query:  MGFTEDSDIFL---------FCIQISIGIFFLV--LIALAYHCRRRIQV--AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQA
        M  T DS  FL         + I +S+GI  L+  +   +Y C R  QV  AA  GG G R   P  +E          VD+G  + T+  +P+M YS+A
Subjt:  MGFTEDSDIFL---------FCIQISIGIFFLV--LIALAYHCRRRIQV--AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQA

Query:  K---SDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
        K    D     C+ICL D++  +   LRLLP CGH+FH+ C+D WLR   TCP+CR   +PTP
Subjt:  K---SDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

A0A7J7DSD4 RING-H2 finger protein ATL70-like1.8e-1839.61Show/hide
Query:  GFTEDSDI--FLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK----SDGDG
        GF   ++I  F + I +SIGI  L+  +   +Y C R        GG      N  S  +    AA   +D+G  D T+  +P++ YS+AK    SD   
Subjt:  GFTEDSDI--FLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK----SDGDG

Query:  GGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
          C+ICL D++  +S  LRLLP CGH+FHV C+D WLR   TCP+CR   LPTP
Subjt:  GGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

A5C345 RING-type domain-containing protein1.0e-1840.71Show/hide
Query:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE
        I +S+GI  L+  +   +Y C R  QV AA  GG G R   P  +E          VD+G  + T+  +P+M YS+AK    D     C+ICL D++  +
Subjt:  IQISIGIFFLV--LIALAYHCRRRIQV-AADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAK---SDGDGGGCAICLTDFRERE

Query:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
           LRLLP CGH+FH+ C+D WLR   TCP+CR   +PTP
Subjt:  SLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

SwissProt top hitse value%identityAlignment
O82353 RING-H2 finger protein ATL673.5e-1632.93Show/hide
Query:  FLFCIQISIGIFFL---VLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSA------VDLGCVDTTVSKFPEMQYSQ----AKSDGDGGG-
        F + I I++G   L   VL++    CR   +    +   GDRG +     I      D+       V +G     ++ +P+  +S+    A SDG GGG 
Subjt:  FLFCIQISIGIFFL---VLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSA------VDLGCVDTTVSKFPEMQYSQ----AKSDGDGGG-

Query:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP-SPPYTNPSAAI
           C+ICL +++E E   LR++P C H FH+ C+D WL+   +CP+CRN  LPTP S P + P + +
Subjt:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP-SPPYTNPSAAI

Q8RX29 RING-H2 finger protein ATL701.0e-1533.55Show/hide
Query:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADS----AVDL--GCVDTTVSKFPEMQYSQAKSDGDGGG
        T+D   F + I +SIG+  L+  +   +Y+C R               S+P+     S           +D+  G  + T+  +P++ YS+AK       
Subjt:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADS----AVDL--GCVDTTVSKFPEMQYSQAKSDGDGGG

Query:  CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
        CAICL D++ +    LR LP C H+FH+ CID WLR   TCP+CR   LPTP
Subjt:  CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

Q8RXX9 E3 ubiquitin-protein ligase ATL64.3e-1440.16Show/hide
Query:  IFFLVLIALAY-HCRRRIQVAADLGGVGDRGSNPASDEISSAC--AADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGG---CAICLTDFRERESLRLRL
        +FF+   ++ + HC           GV D G +PA    S A   AA   +D+  V+T    FP   YS  K+   G G   CAICL +F + E+  LRL
Subjt:  IFFLVLIALAY-HCRRRIQVAADLGGVGDRGSNPASDEISSAC--AADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGG---CAICLTDFRERESLRLRL

Query:  LPHCGHVFHVTCIDQWLRRQTTCPICR
        LP C HVFH  CID WL    TCP+CR
Subjt:  LPHCGHVFHVTCIDQWLRRQTTCPICR

Q9LZJ6 RING-H2 finger protein ATL51.4e-1232.39Show/hide
Query:  IFFLVLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTV-SKFPEMQYSQAKSDGDGGGCAICLTDFRERESLRLRLLPHCG
        +F  V++ L +H   R         +  R S       ++     S+  L  +D TV  K P   YS    +     C++CL++F E +    R+LP CG
Subjt:  IFFLVLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTV-SKFPEMQYSQAKSDGDGGGCAICLTDFRERESLRLRLLPHCG

Query:  HVFHVTCIDQWLRRQTTCPICRNPALPTPSPPYTNPSAAIAL
        HVFHV CID W R +++CP+CR P    P+ P T P    A+
Subjt:  HVFHVTCIDQWLRRQTTCPICRNPALPTPSPPYTNPSAAIAL

Q9SN27 E3 ubiquitin-protein ligase ATL596.2e-1332.24Show/hide
Query:  FLFCIQISIGIFFLVLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGGCAICLTDFRERESL
        F F + + I +  +VL+ L Y  RR      D   +G  G  P ++ +S+A       +LG         P + Y ++ +  D   C++CL D++  E  
Subjt:  FLFCIQISIGIFFLVLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGGCAICLTDFRERESL

Query:  RLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSPPYTNPSAAIALS
        +L+ +P CGH FH+ CID WL   TTCP+CR   +P PS   ++ S  I  S
Subjt:  RLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSPPYTNPSAAIALS

Arabidopsis top hitse value%identityAlignment
AT2G35910.1 RING/U-box superfamily protein7.3e-1733.55Show/hide
Query:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADS----AVDL--GCVDTTVSKFPEMQYSQAKSDGDGGG
        T+D   F + I +SIG+  L+  +   +Y+C R               S+P+     S           +D+  G  + T+  +P++ YS+AK       
Subjt:  TEDSDIFLFCIQISIGIFFLV--LIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADS----AVDL--GCVDTTVSKFPEMQYSQAKSDGDGGG

Query:  CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP
        CAICL D++ +    LR LP C H+FH+ CID WLR   TCP+CR   LPTP
Subjt:  CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP

AT2G46160.1 RING/U-box superfamily protein2.5e-1732.93Show/hide
Query:  FLFCIQISIGIFFL---VLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSA------VDLGCVDTTVSKFPEMQYSQ----AKSDGDGGG-
        F + I I++G   L   VL++    CR   +    +   GDRG +     I      D+       V +G     ++ +P+  +S+    A SDG GGG 
Subjt:  FLFCIQISIGIFFL---VLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSA------VDLGCVDTTVSKFPEMQYSQ----AKSDGDGGG-

Query:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP-SPPYTNPSAAI
           C+ICL +++E E   LR++P C H FH+ C+D WL+   +CP+CRN  LPTP S P + P + +
Subjt:  ---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTP-SPPYTNPSAAI

AT3G05200.1 RING/U-box superfamily protein3.1e-1540.16Show/hide
Query:  IFFLVLIALAY-HCRRRIQVAADLGGVGDRGSNPASDEISSAC--AADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGG---CAICLTDFRERESLRLRL
        +FF+   ++ + HC           GV D G +PA    S A   AA   +D+  V+T    FP   YS  K+   G G   CAICL +F + E+  LRL
Subjt:  IFFLVLIALAY-HCRRRIQVAADLGGVGDRGSNPASDEISSAC--AADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGG---CAICLTDFRERESLRLRL

Query:  LPHCGHVFHVTCIDQWLRRQTTCPICR
        LP C HVFH  CID WL    TCP+CR
Subjt:  LPHCGHVFHVTCIDQWLRRQTTCPICR

AT4G10160.1 RING/U-box superfamily protein4.4e-1432.24Show/hide
Query:  FLFCIQISIGIFFLVLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGGCAICLTDFRERESL
        F F + + I +  +VL+ L Y  RR      D   +G  G  P ++ +S+A       +LG         P + Y ++ +  D   C++CL D++  E  
Subjt:  FLFCIQISIGIFFLVLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGGCAICLTDFRERESL

Query:  RLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSPPYTNPSAAIALS
        +L+ +P CGH FH+ CID WL   TTCP+CR   +P PS   ++ S  I  S
Subjt:  RLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSPPYTNPSAAIALS

AT4G33565.1 RING/U-box superfamily protein1.8e-1545.95Show/hide
Query:  LGCVDTTVSKFPEMQYSQAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNP
        +G   T +S     QYS+     +G  C++CL++F E E+  LRLLP C H FH+ CID WLR  T CP+CR P
Subjt:  LGCVDTTVSKFPEMQYSQAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTTCPICRNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTACAGAGGATTCAGATATTTTTTTATTTTGCATCCAAATCTCCATCGGCATCTTCTTCCTCGTTCTCATAGCCCTAGCTTACCACTGCAGACGCCGCATCCA
AGTCGCCGCCGATCTCGGCGGCGTCGGCGACAGAGGCAGCAATCCGGCCTCCGACGAGATCAGTTCCGCCTGCGCCGCCGACTCCGCTGTGGATCTCGGCTGCGTGGATA
CTACTGTGAGCAAGTTCCCGGAGATGCAGTACTCGCAAGCGAAGAGCGACGGCGACGGCGGCGGATGTGCGATTTGCTTGACGGATTTCAGAGAGAGAGAGTCGCTCCGG
CTGCGGCTACTGCCGCATTGTGGACACGTGTTCCATGTCACGTGCATAGATCAGTGGCTGCGCCGGCAAACCACGTGTCCGATATGTAGAAATCCGGCTTTGCCGACGCC
TAGCCCTCCTTATACGAATCCTTCGGCCGCCATTGCTCTTTCCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTACAGAGGATTCAGATATTTTTTTATTTTGCATCCAAATCTCCATCGGCATCTTCTTCCTCGTTCTCATAGCCCTAGCTTACCACTGCAGACGCCGCATCCA
AGTCGCCGCCGATCTCGGCGGCGTCGGCGACAGAGGCAGCAATCCGGCCTCCGACGAGATCAGTTCCGCCTGCGCCGCCGACTCCGCTGTGGATCTCGGCTGCGTGGATA
CTACTGTGAGCAAGTTCCCGGAGATGCAGTACTCGCAAGCGAAGAGCGACGGCGACGGCGGCGGATGTGCGATTTGCTTGACGGATTTCAGAGAGAGAGAGTCGCTCCGG
CTGCGGCTACTGCCGCATTGTGGACACGTGTTCCATGTCACGTGCATAGATCAGTGGCTGCGCCGGCAAACCACGTGTCCGATATGTAGAAATCCGGCTTTGCCGACGCC
TAGCCCTCCTTATACGAATCCTTCGGCCGCCATTGCTCTTTCCAGTTAG
Protein sequenceShow/hide protein sequence
MGFTEDSDIFLFCIQISIGIFFLVLIALAYHCRRRIQVAADLGGVGDRGSNPASDEISSACAADSAVDLGCVDTTVSKFPEMQYSQAKSDGDGGGCAICLTDFRERESLR
LRLLPHCGHVFHVTCIDQWLRRQTTCPICRNPALPTPSPPYTNPSAAIALSS