; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040395 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040395
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:4434709..4435951
RNA-Seq ExpressionLag0040395
SyntenyLag0040395
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015388532.1 uncharacterized protein LOC107178176 [Citrus sinensis]6.1e-2437.58Show/hide
Query:  DDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDR
        ++L++K ++ +L  EE  +I  G          +  C+VGK+L ++ V  E  R  M+ AWR    T+VE  G+N+F+ +F ++ EK R+L  GPW FDR
Subjt:  DDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDR

Query:  SLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        SL+V+TEP  +  V + +F   PFWVQIHN+P+    +   Q +  R+G
Subjt:  SLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.2e-3144.67Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MD++   W+ +  T +E E +        L+A ++ LCVV K+ +SKR++ EA R+VM+S WRVHN+TR EP G N++VI F++  EKSRVL +GPW F+
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        +SL+VLT P      L+  F  C FW+QIHN+P +  +   A  L A+LG
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]5.5e-2538Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MD++ + W++++LT E+ E I   +    ++  ++    VGK+ +SKR++ EAFR+VM+S W+VH +T +E AG N++VI F++  EK+RVL +GPW+F+
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
         SL+VLT P       +  F     W+QIH +P +   +  A+ L  R+G
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.1e-2842Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MDD+ K W++++L  EE + I        L+  ++ LC VGK+  SKR+  EAF +VM+  W++HN+TR+E AG N++VI F+T  EK RV   GPW FD
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        +SL++L         L+ +   C FWVQIH +  +  T+  A+ L ARLG
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.1e-3043.33Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MD++ + W++++LT EE E          L+A ++ LC VGK+ +SKR++ +A  +VM+  W++H +TR+E AG N++VI F+T  EK RVL +GPW FD
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        +SL VL  P      L+ +F+ C FWVQIH +P ++ TR  A+ L  RLG
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

TrEMBL top hitse value%identityAlignment
A0A5C7HK10 CCHC-type domain-containing protein2.1e-2231.13Show/hide
Query:  DLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRS
        ++ K ++  S+  E++ +            A++D+C+VGK++S K+ N EAF+N++   W       +E  G N+FV  F  + E++R+   GPW FD S
Subjt:  DLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFDRS

Query:  LIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLGWLR
        LI L +P+ + ++   +F     W+QIH+VP+    R  A+ +  ++GWL+
Subjt:  LIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLGWLR

A0A6J1D765 uncharacterized protein LOC1110179022.5e-3144.67Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MD++   W+ +  T +E E +        L+A ++ LCVV K+ +SKR++ EA R+VM+S WRVHN+TR EP G N++VI F++  EKSRVL +GPW F+
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        +SL+VLT P      L+  F  C FW+QIHN+P +  +   A  L A+LG
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

A0A6J1DP89 uncharacterized protein LOC1110229322.7e-2538Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MD++ + W++++LT E+ E I   +    ++  ++    VGK+ +SKR++ EAFR+VM+S W+VH +T +E AG N++VI F++  EK+RVL +GPW+F+
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
         SL+VLT P       +  F     W+QIH +P +   +  A+ L  R+G
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

A0A6J1DVS4 uncharacterized protein LOC1110235555.2e-2942Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MDD+ K W++++L  EE + I        L+  ++ LC VGK+  SKR+  EAF +VM+  W++HN+TR+E AG N++VI F+T  EK RV   GPW FD
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        +SL++L         L+ +   C FWVQIH +  +  T+  A+ L ARLG
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

A0A6J1DYG3 uncharacterized protein LOC1110246765.6e-3143.33Show/hide
Query:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD
        MD++ + W++++LT EE E          L+A ++ LC VGK+ +SKR++ +A  +VM+  W++H +TR+E AG N++VI F+T  EK RVL +GPW FD
Subjt:  MDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVLGTGPWAFD

Query:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        +SL VL  P      L+ +F+ C FWVQIH +P ++ TR  A+ L  RLG
Subjt:  RSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding8.8e-0531.51Show/hide
Query:  IQFRTRGEKS--RVLGTGPWAFDRSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG
        I+F  + E+S   +L  GPW+F+  + V+     + S  + EFK  PFW+QI  +P+++ T      +  R+G
Subjt:  IQFRTRGEKS--RVLGTGPWAFDRSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTAGGGTTCCGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTG
CGAGTCGCGGCTGTGGGATGGAGGCGACGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAG
GCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGAT
GTTTCTTCGGCGATTGGAGGGGTGGCGCGACGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGA
GGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGA
ATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTA
GGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGAT
TCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTTAGGGTTCCGGCGGCGAACGGTGACCTGGGGAGCGAGCTTGCAGTGGAGGCGGCGATTGGTGAAGCGGTGAGCGGCGAGACCGTGAACGGGTTTTGCTGGTG
CGAGTCGCGGCTGTGGGATGGAGGCGACGCGGTGAGCGGCGAGACTGTGGAGCGTGGACTGTGCGAGTCGCGGCTGTGGACTCCTTTTTCCGGCGAGCGTGCGTTTGGAG
GCGGTGAACAGAGTACAGAGGGCAGCTATCTGATTTCAGGTGTGCGGCGCGGTGGTGCGTGCGGCGGAGCAGAGGGTCTGGTTCCGGCGAGAGCTTGTGTTGAATTAGAT
GTTTCTTCGGCGATTGGAGGGGTGGCGCGACGTTGGGTGAAGGGAGTTTTGGTGATGGATGACTTGGTGAAAAAGTGGAAGTCGTGGTCACTTACTGGGGAGGAGGCGGA
GGTGATACGTCCGGGTGCAGTTCCGTCTTCTCTGTCAGCGGCAGACTTGGATCTATGTGTGGTTGGTAAGGTTCTATCATCCAAGCGAGTCAATCCAGAGGCCTTTCGGA
ATGTGATGCGGTCAGCATGGAGGGTTCACAATGCGACGCGTGTGGAGCCAGCGGGAGAGAACGTCTTTGTTATTCAGTTTCGTACCAGAGGGGAGAAGTCGCGAGTTCTA
GGAACGGGTCCTTGGGCCTTTGACCGGTCCCTTATTGTGCTTACGGAGCCCAAGGATGTTGCATCGGTGCTAGAAACAGAGTTTAAAGATTGTCCTTTCTGGGTGCAGAT
TCATAATGTTCCTATGAAGTGGCAGACGAGAGGTTGGGCGCAGCATCTGGAGGCAAGATTGGGGTGGTTGAGGAGGTGGGCGGTTCAAATGAGAATGATTGGATAG
Protein sequenceShow/hide protein sequence
MKVRVPAANGDLGSELAVEAAIGEAVSGETVNGFCWCESRLWDGGDAVSGETVERGLCESRLWTPFSGERAFGGGEQSTEGSYLISGVRRGGACGGAEGLVPARACVELD
VSSAIGGVARRWVKGVLVMDDLVKKWKSWSLTGEEAEVIRPGAVPSSLSAADLDLCVVGKVLSSKRVNPEAFRNVMRSAWRVHNATRVEPAGENVFVIQFRTRGEKSRVL
GTGPWAFDRSLIVLTEPKDVASVLETEFKDCPFWVQIHNVPMKWQTRGWAQHLEARLGWLRRWAVQMRMIG